Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 RNU6-918P-201ENST00000391219 106 ntBASIC-1.66□□□□□ -2.68
VAPAQ9P0L0 MIR4490-201ENST00000582647 84 ntBASIC-1.66□□□□□ -2.68
VAPAQ9P0L0 MIR3657-201ENST00000584818 117 ntBASIC-1.66□□□□□ -2.68
VAPAQ9P0L0 MIR6509-201ENST00000614603 85 ntBASIC-1.66□□□□□ -2.68
VAPAQ9P0L0 MIR3658-201ENST00000636291 56 ntBASIC-1.66□□□□□ -2.68
VAPAQ9P0L0 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.67□□□□□ -2.68
VAPAQ9P0L0 SNORA33.2-201ENST00000365413 134 ntBASIC-1.67□□□□□ -2.68
VAPAQ9P0L0 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.67□□□□□ -2.68
VAPAQ9P0L0 Y_RNA.396-201ENST00000383949 103 ntBASIC-1.67□□□□□ -2.68
VAPAQ9P0L0 RNU6-409P-201ENST00000384114 104 ntBASIC-1.67□□□□□ -2.68
VAPAQ9P0L0 RNU6-540P-201ENST00000384622 101 ntBASIC-1.67□□□□□ -2.68
VAPAQ9P0L0 Y_RNA.558-201ENST00000384685 113 ntBASIC-1.67□□□□□ -2.68
VAPAQ9P0L0 RNA5SP292-201ENST00000390974 118 ntBASIC-1.67□□□□□ -2.68
VAPAQ9P0L0 RNU6-518P-201ENST00000516056 96 ntBASIC-1.67□□□□□ -2.68
VAPAQ9P0L0 AL513043.2-201ENST00000573941 143 ntBASIC-1.67□□□□□ -2.68
VAPAQ9P0L0 RNU6-246P-201ENST00000384702 107 ntBASIC-1.68□□□□□ -2.68
VAPAQ9P0L0 RNU6-1018P-201ENST00000516577 106 ntBASIC-1.68□□□□□ -2.68
VAPAQ9P0L0 RNU6-824P-201ENST00000363724 104 ntBASIC-1.69□□□□□ -2.68
VAPAQ9P0L0 Y_RNA.198-201ENST00000364013 98 ntBASIC-1.69□□□□□ -2.68
VAPAQ9P0L0 Y_RNA.344-201ENST00000365381 112 ntBASIC-1.69□□□□□ -2.68
VAPAQ9P0L0 Y_RNA.491-201ENST00000384417 107 ntBASIC-1.69□□□□□ -2.68
VAPAQ9P0L0 MIR548D2-201ENST00000384955 97 ntBASIC-1.69□□□□□ -2.68
VAPAQ9P0L0 RNU7-154P-201ENST00000516194 62 ntBASIC-1.69□□□□□ -2.68
VAPAQ9P0L0 AC104996.3-201ENST00000590718 94 ntBASIC-1.69□□□□□ -2.68
VAPAQ9P0L0 AL627230.5-201ENST00000619807 58 ntBASIC-1.69□□□□□ -2.68
VAPAQ9P0L0 Y_RNA.163-201ENST00000363702 113 ntBASIC-1.7□□□□□ -2.68
VAPAQ9P0L0 Y_RNA.435-201ENST00000384095 112 ntBASIC-1.7□□□□□ -2.68
VAPAQ9P0L0 RNU6-239P-201ENST00000390990 99 ntBASIC-1.7□□□□□ -2.68
VAPAQ9P0L0 Y_RNA.700-201ENST00000516806 100 ntBASIC-1.7□□□□□ -2.68
VAPAQ9P0L0 SNORD18.1-201ENST00000363807 70 ntBASIC-1.71□□□□□ -2.68
VAPAQ9P0L0 Y_RNA.574-201ENST00000384766 95 ntBASIC-1.71□□□□□ -2.68
VAPAQ9P0L0 MIR548U-201ENST00000390728 81 ntBASIC-1.71□□□□□ -2.68
VAPAQ9P0L0 MIR548Q-201ENST00000408404 100 ntBASIC-1.71□□□□□ -2.68
VAPAQ9P0L0 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.71□□□□□ -2.68
VAPAQ9P0L0 RNA5SP180-201ENST00000516181 101 ntBASIC-1.71□□□□□ -2.68
VAPAQ9P0L0 AC006254.2-201ENST00000603259 279 ntBASIC-1.71□□□□□ -2.68
VAPAQ9P0L0 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.72□□□□□ -2.68
VAPAQ9P0L0 MIR1263-201ENST00000408324 86 ntBASIC-1.72□□□□□ -2.68
VAPAQ9P0L0 RNA5SP272-201ENST00000516095 111 ntBASIC-1.72□□□□□ -2.68
VAPAQ9P0L0 DNAJC19P2-201ENST00000593340 302 ntBASIC-1.72□□□□□ -2.68
VAPAQ9P0L0 RNU6-228P-201ENST00000362700 106 ntBASIC-1.73□□□□□ -2.69
VAPAQ9P0L0 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-1.73□□□□□ -2.69
VAPAQ9P0L0 AC018880.2-201ENST00000414265 201 ntBASIC-1.73□□□□□ -2.69
VAPAQ9P0L0 RNU6-1219P-201ENST00000516143 112 ntBASIC-1.73□□□□□ -2.69
VAPAQ9P0L0 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.73□□□□□ -2.69
VAPAQ9P0L0 RNU6-1318P-201ENST00000365389 103 ntBASIC-1.74□□□□□ -2.69
VAPAQ9P0L0 Y_RNA.401-201ENST00000383965 117 ntBASIC-1.74□□□□□ -2.69
VAPAQ9P0L0 Y_RNA.507-201ENST00000384500 99 ntBASIC-1.74□□□□□ -2.69
VAPAQ9P0L0 MIR521-2-201ENST00000384818 87 ntBASIC-1.74□□□□□ -2.69
VAPAQ9P0L0 AL691482.2-201ENST00000457453 84 ntBASIC-1.74□□□□□ -2.69
VAPAQ9P0L0 SNORD4B-201ENST00000459083 72 ntBASIC-1.74□□□□□ -2.69
VAPAQ9P0L0 RNU6-1271P-201ENST00000517049 105 ntBASIC-1.74□□□□□ -2.69
VAPAQ9P0L0 MIR3121-201ENST00000579680 77 ntBASIC-1.74□□□□□ -2.69
VAPAQ9P0L0 RNU6-816P-201ENST00000390914 107 ntBASIC-1.75□□□□□ -2.69
VAPAQ9P0L0 RNU6-1268P-201ENST00000391214 107 ntBASIC-1.75□□□□□ -2.69
VAPAQ9P0L0 RNU6-1239P-201ENST00000391310 107 ntBASIC-1.75□□□□□ -2.69
VAPAQ9P0L0 RNU7-121P-201ENST00000516604 62 ntBASIC-1.75□□□□□ -2.69
VAPAQ9P0L0 SNORA18.5-201ENST00000516616 101 ntBASIC-1.75□□□□□ -2.69
VAPAQ9P0L0 DLEU2_3.2-201ENST00000612883 73 ntBASIC-1.75□□□□□ -2.69
VAPAQ9P0L0 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.76□□□□□ -2.69
VAPAQ9P0L0 Y_RNA.288-201ENST00000364854 92 ntBASIC-1.76□□□□□ -2.69
VAPAQ9P0L0 MIR577-201ENST00000385196 96 ntBASIC-1.76□□□□□ -2.69
VAPAQ9P0L0 SNORD58.1-201ENST00000391313 66 ntBASIC-1.76□□□□□ -2.69
VAPAQ9P0L0 MIR548I1-201ENST00000408810 149 ntBASIC-1.76□□□□□ -2.69
VAPAQ9P0L0 MIR1468-201ENST00000410600 86 ntBASIC-1.76□□□□□ -2.69
VAPAQ9P0L0 MTND3P2-201ENST00000438452 342 ntBASIC-1.76□□□□□ -2.69
VAPAQ9P0L0 RNU6-62P-201ENST00000516526 102 ntBASIC-1.76□□□□□ -2.69
VAPAQ9P0L0 RNU6-158P-201ENST00000517104 100 ntBASIC-1.76□□□□□ -2.69
VAPAQ9P0L0 MIR3613-201ENST00000579844 87 ntBASIC-1.76□□□□□ -2.69
VAPAQ9P0L0 RNU6-79P-201ENST00000362511 107 ntBASIC-1.77□□□□□ -2.69
VAPAQ9P0L0 RNA5SP136-201ENST00000410906 107 ntBASIC-1.77□□□□□ -2.69
VAPAQ9P0L0 MIR548Z-201ENST00000584743 97 ntBASIC-1.77□□□□□ -2.69
VAPAQ9P0L0 RNU6-1020P-201ENST00000363684 107 ntBASIC-1.78□□□□□ -2.69
VAPAQ9P0L0 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.78□□□□□ -2.69
VAPAQ9P0L0 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.78□□□□□ -2.69
VAPAQ9P0L0 RNU6-400P-201ENST00000391173 106 ntBASIC-1.78□□□□□ -2.69
VAPAQ9P0L0 MIR1285-2-201ENST00000408311 88 ntBASIC-1.78□□□□□ -2.69
VAPAQ9P0L0 RNU6-983P-201ENST00000516004 103 ntBASIC-1.78□□□□□ -2.69
VAPAQ9P0L0 AC130289.1-201ENST00000577321 73 ntBASIC-1.78□□□□□ -2.69
VAPAQ9P0L0 Y_RNA.20-201ENST00000362479 113 ntBASIC-1.79□□□□□ -2.7
VAPAQ9P0L0 RNU6-478P-201ENST00000363904 110 ntBASIC-1.79□□□□□ -2.7
VAPAQ9P0L0 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.79□□□□□ -2.7
VAPAQ9P0L0 SNORD115-27-201ENST00000364430 82 ntBASIC-1.79□□□□□ -2.7
VAPAQ9P0L0 Y_RNA.535-201ENST00000384612 99 ntBASIC-1.79□□□□□ -2.7
VAPAQ9P0L0 RNU4-71P-201ENST00000516258 113 ntBASIC-1.79□□□□□ -2.7
VAPAQ9P0L0 MIR4801-201ENST00000582704 82 ntBASIC-1.79□□□□□ -2.7
VAPAQ9P0L0 AC103810.7-201ENST00000607821 91 ntBASIC-1.79□□□□□ -2.7
VAPAQ9P0L0 RNU6-608P-201ENST00000383927 104 ntBASIC-1.8□□□□□ -2.7
VAPAQ9P0L0 MTATP6P29-201ENST00000415057 132 ntBASIC-1.8□□□□□ -2.7
VAPAQ9P0L0 AL021921.1-201ENST00000442774 93 ntBASIC-1.8□□□□□ -2.7
VAPAQ9P0L0 AC108019.1-201ENST00000512540 175 ntBASIC-1.8□□□□□ -2.7
VAPAQ9P0L0 MIR365A-201ENST00000362260 87 ntBASIC-1.81□□□□□ -2.7
VAPAQ9P0L0 Y_RNA.233-201ENST00000364407 101 ntBASIC-1.81□□□□□ -2.7
VAPAQ9P0L0 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.81□□□□□ -2.7
VAPAQ9P0L0 MIR6739-201ENST00000622461 75 ntBASIC-1.81□□□□□ -2.7
VAPAQ9P0L0 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.82□□□□□ -2.7
VAPAQ9P0L0 RNU6-915P-201ENST00000364943 103 ntBASIC-1.82□□□□□ -2.7
VAPAQ9P0L0 Y_RNA.467-201ENST00000384297 102 ntBASIC-1.82□□□□□ -2.7
VAPAQ9P0L0 MIR520D-201ENST00000385002 87 ntBASIC-1.82□□□□□ -2.7
VAPAQ9P0L0 RNU6-630P-201ENST00000391258 106 ntBASIC-1.82□□□□□ -2.7
Retrieved 100 of 98,524 protein–RNA pairs in 175.8 ms