Protein–RNA interactions for Protein: Q9NZI7

UBP1, Upstream-binding protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1Q9NZI7 SNORA2A-201ENST00000383885 135 ntBASIC0.7□□□□□ -2.3
UBP1Q9NZI7 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
UBP1Q9NZI7 RNU6-1275P-201ENST00000391087 107 ntBASIC0.7□□□□□ -2.3
UBP1Q9NZI7 SNORD75.2-201ENST00000408784 58 ntBASIC0.7□□□□□ -2.3
UBP1Q9NZI7 RNU6-807P-201ENST00000516805 107 ntBASIC0.7□□□□□ -2.3
UBP1Q9NZI7 MIR4752-201ENST00000579672 72 ntBASIC0.7□□□□□ -2.3
UBP1Q9NZI7 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
UBP1Q9NZI7 RNU6-495P-201ENST00000362995 107 ntBASIC0.69□□□□□ -2.3
UBP1Q9NZI7 Y_RNA.371-201ENST00000365591 113 ntBASIC0.69□□□□□ -2.3
UBP1Q9NZI7 RNU1-29P-201ENST00000606574 126 ntBASIC0.69□□□□□ -2.3
UBP1Q9NZI7 SNORA70.25-201ENST00000612741 95 ntBASIC0.69□□□□□ -2.3
UBP1Q9NZI7 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
UBP1Q9NZI7 Y_RNA.36-201ENST00000362602 112 ntBASIC0.68□□□□□ -2.3
UBP1Q9NZI7 RNU6-54P-201ENST00000365563 107 ntBASIC0.68□□□□□ -2.3
UBP1Q9NZI7 MIR508-201ENST00000384857 115 ntBASIC0.68□□□□□ -2.3
UBP1Q9NZI7 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.68□□□□□ -2.3
UBP1Q9NZI7 RNA5SP395-201ENST00000516567 118 ntBASIC0.68□□□□□ -2.3
UBP1Q9NZI7 SNORD114-4-201ENST00000363962 75 ntBASIC0.67□□□□□ -2.3
UBP1Q9NZI7 RNU6-24P-201ENST00000384440 107 ntBASIC0.67□□□□□ -2.3
UBP1Q9NZI7 RNU6-274P-201ENST00000459566 107 ntBASIC0.67□□□□□ -2.3
UBP1Q9NZI7 RNU6-857P-201ENST00000515893 110 ntBASIC0.67□□□□□ -2.3
UBP1Q9NZI7 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.67□□□□□ -2.3
UBP1Q9NZI7 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.66□□□□□ -2.3
UBP1Q9NZI7 Y_RNA.258-201ENST00000364613 105 ntBASIC0.66□□□□□ -2.3
UBP1Q9NZI7 RNU6-382P-201ENST00000365181 106 ntBASIC0.66□□□□□ -2.3
UBP1Q9NZI7 Y_RNA.423-201ENST00000384057 113 ntBASIC0.66□□□□□ -2.3
UBP1Q9NZI7 RNU6-752P-201ENST00000516376 102 ntBASIC0.66□□□□□ -2.3
UBP1Q9NZI7 RNU6-229P-201ENST00000516614 102 ntBASIC0.66□□□□□ -2.3
UBP1Q9NZI7 RNU5B-6P-201ENST00000516765 68 ntBASIC0.66□□□□□ -2.3
UBP1Q9NZI7 MIR4773-1-201ENST00000637203 78 ntBASIC0.66□□□□□ -2.3
UBP1Q9NZI7 Y_RNA.407-201ENST00000383986 113 ntBASIC0.65□□□□□ -2.31
UBP1Q9NZI7 MIR6779-201ENST00000617283 64 ntBASIC0.65□□□□□ -2.31
UBP1Q9NZI7 SNORD44.1-201ENST00000363202 61 ntBASIC0.64□□□□□ -2.31
UBP1Q9NZI7 MIR216A-201ENST00000385063 110 ntBASIC0.64□□□□□ -2.31
UBP1Q9NZI7 RNA5SP225-201ENST00000410874 135 ntBASIC0.64□□□□□ -2.31
UBP1Q9NZI7 AC074348.1-201ENST00000426503 132 ntBASIC0.64□□□□□ -2.31
UBP1Q9NZI7 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.64□□□□□ -2.31
UBP1Q9NZI7 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.63□□□□□ -2.31
UBP1Q9NZI7 Y_RNA.205-201ENST00000364128 113 ntBASIC0.63□□□□□ -2.31
UBP1Q9NZI7 Y_RNA.540-201ENST00000384638 111 ntBASIC0.63□□□□□ -2.31
UBP1Q9NZI7 MIR6755-201ENST00000619993 66 ntBASIC0.63□□□□□ -2.31
UBP1Q9NZI7 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.62□□□□□ -2.31
UBP1Q9NZI7 Y_RNA.125-201ENST00000363371 111 ntBASIC0.61□□□□□ -2.31
UBP1Q9NZI7 SNORD114-26-201ENST00000363543 72 ntBASIC0.61□□□□□ -2.31
UBP1Q9NZI7 RNA5SP325-201ENST00000363756 130 ntBASIC0.61□□□□□ -2.31
UBP1Q9NZI7 SNORA68.3-201ENST00000515906 83 ntBASIC0.61□□□□□ -2.31
UBP1Q9NZI7 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
UBP1Q9NZI7 HMGN2P22-201ENST00000427588 175 ntBASIC0.6□□□□□ -2.31
UBP1Q9NZI7 RN7SL793P-201ENST00000583259 296 ntBASIC0.6□□□□□ -2.31
UBP1Q9NZI7 MIR4473-201ENST00000583731 91 ntBASIC0.6□□□□□ -2.31
UBP1Q9NZI7 DLEU2_3.2-201ENST00000612883 73 ntBASIC0.6□□□□□ -2.31
UBP1Q9NZI7 uc_338.10-201ENST00000621872 182 ntBASIC0.6□□□□□ -2.31
UBP1Q9NZI7 MIRLET7D-201ENST00000362263 87 ntBASIC0.59□□□□□ -2.31
UBP1Q9NZI7 MIR760-201ENST00000390220 80 ntBASIC0.59□□□□□ -2.31
UBP1Q9NZI7 SNORD42B-201ENST00000458893 67 ntBASIC0.59□□□□□ -2.31
UBP1Q9NZI7 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.58□□□□□ -2.32
UBP1Q9NZI7 RNU6-154P-201ENST00000384306 106 ntBASIC0.58□□□□□ -2.32
UBP1Q9NZI7 Y_RNA.532-201ENST00000384590 113 ntBASIC0.58□□□□□ -2.32
UBP1Q9NZI7 MIR92A1-201ENST00000385233 78 ntBASIC0.58□□□□□ -2.32
UBP1Q9NZI7 AL691482.2-201ENST00000457453 84 ntBASIC0.58□□□□□ -2.32
UBP1Q9NZI7 AC090625.1-201ENST00000357130 210 ntBASIC0.57□□□□□ -2.32
UBP1Q9NZI7 RNA5SP128-201ENST00000365305 116 ntBASIC0.57□□□□□ -2.32
UBP1Q9NZI7 RNU6-1039P-201ENST00000383931 107 ntBASIC0.57□□□□□ -2.32
UBP1Q9NZI7 RNU6-638P-201ENST00000516582 104 ntBASIC0.57□□□□□ -2.32
UBP1Q9NZI7 RNA5SP499-201ENST00000363982 119 ntBASIC0.56□□□□□ -2.32
UBP1Q9NZI7 MIR6513-201ENST00000621188 64 ntBASIC0.56□□□□□ -2.32
UBP1Q9NZI7 SCARNA17.3-201ENST00000516381 125 ntBASIC0.55□□□□□ -2.32
UBP1Q9NZI7 MIR4484-201ENST00000582855 83 ntBASIC0.55□□□□□ -2.32
UBP1Q9NZI7 AC145423.2-201ENST00000610631 239 ntBASIC0.55□□□□□ -2.32
UBP1Q9NZI7 U7.4-201ENST00000614961 63 ntBASIC0.55□□□□□ -2.32
UBP1Q9NZI7 uc_338.17-201ENST00000619633 179 ntBASIC0.55□□□□□ -2.32
UBP1Q9NZI7 MIR501-201ENST00000390204 84 ntBASIC0.54□□□□□ -2.32
UBP1Q9NZI7 AL157398.1-201ENST00000452981 186 ntBASIC0.54□□□□□ -2.32
UBP1Q9NZI7 MIR548AE1-201ENST00000583292 70 ntBASIC0.54□□□□□ -2.32
UBP1Q9NZI7 MIR3675-201ENST00000583661 73 ntBASIC0.54□□□□□ -2.32
UBP1Q9NZI7 MIR548AD-201ENST00000584780 82 ntBASIC0.54□□□□□ -2.32
UBP1Q9NZI7 MIR6509-201ENST00000614603 85 ntBASIC0.54□□□□□ -2.32
UBP1Q9NZI7 MIR103A1-201ENST00000362165 78 ntBASIC0.53□□□□□ -2.32
UBP1Q9NZI7 SNORA9.1-201ENST00000362412 131 ntBASIC0.53□□□□□ -2.32
UBP1Q9NZI7 MIR652-201ENST00000385278 98 ntBASIC0.53□□□□□ -2.32
UBP1Q9NZI7 MIR936-201ENST00000401264 98 ntBASIC0.53□□□□□ -2.32
UBP1Q9NZI7 RNU6-1232P-201ENST00000516299 86 ntBASIC0.53□□□□□ -2.32
UBP1Q9NZI7 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.52□□□□□ -2.33
UBP1Q9NZI7 RNA5SP347-201ENST00000362445 119 ntBASIC0.52□□□□□ -2.33
UBP1Q9NZI7 SNORA8.1-201ENST00000384250 140 ntBASIC0.52□□□□□ -2.33
UBP1Q9NZI7 SCARNA18B-201ENST00000458806 135 ntBASIC0.52□□□□□ -2.33
UBP1Q9NZI7 MIR4677-201ENST00000584153 80 ntBASIC0.52□□□□□ -2.33
UBP1Q9NZI7 AC243829.3-201ENST00000622177 108 ntBASIC0.52□□□□□ -2.33
UBP1Q9NZI7 Y_RNA.244-201ENST00000364484 109 ntBASIC0.51□□□□□ -2.33
UBP1Q9NZI7 Y_RNA.681-201ENST00000516445 113 ntBASIC0.51□□□□□ -2.33
UBP1Q9NZI7 MIR4662A-201ENST00000637499 67 ntBASIC0.51□□□□□ -2.33
UBP1Q9NZI7 SNORD114-23-201ENST00000363536 72 ntBASIC0.5□□□□□ -2.33
UBP1Q9NZI7 RNU6-1327P-201ENST00000365302 105 ntBASIC0.5□□□□□ -2.33
UBP1Q9NZI7 RNU6-260P-201ENST00000384092 107 ntBASIC0.5□□□□□ -2.33
UBP1Q9NZI7 MIR193B-201ENST00000384907 83 ntBASIC0.5□□□□□ -2.33
UBP1Q9NZI7 RNU7-129P-201ENST00000516128 62 ntBASIC0.5□□□□□ -2.33
UBP1Q9NZI7 RNA5SP62-201ENST00000363457 110 ntBASIC0.49□□□□□ -2.33
UBP1Q9NZI7 AC073261.1-201ENST00000429409 121 ntBASIC0.49□□□□□ -2.33
UBP1Q9NZI7 MIR5087-201ENST00000635826 76 ntBASIC0.49□□□□□ -2.33
UBP1Q9NZI7 MIR20A-201ENST00000362279 71 ntBASIC0.48□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms