Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 SNORA8.2-201ENST00000384372 139 ntBASIC1.62□□□□□ -2.15
CUEDC1Q9NWM3 Y_RNA.540-201ENST00000384638 111 ntBASIC1.62□□□□□ -2.15
CUEDC1Q9NWM3 MIR517B-201ENST00000385102 67 ntBASIC1.62□□□□□ -2.15
CUEDC1Q9NWM3 RNU6-1110P-201ENST00000516462 101 ntBASIC1.62□□□□□ -2.15
CUEDC1Q9NWM3 MIR4303-201ENST00000581299 66 ntBASIC1.62□□□□□ -2.15
CUEDC1Q9NWM3 MIR630-201ENST00000384957 97 ntBASIC1.61□□□□□ -2.15
CUEDC1Q9NWM3 RNA5SP47-201ENST00000517230 109 ntBASIC1.61□□□□□ -2.15
CUEDC1Q9NWM3 uc_338.10-201ENST00000621872 182 ntBASIC1.61□□□□□ -2.15
CUEDC1Q9NWM3 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.6□□□□□ -2.15
CUEDC1Q9NWM3 SNORD18A-201ENST00000363753 72 ntBASIC1.6□□□□□ -2.15
CUEDC1Q9NWM3 MIR548C-201ENST00000384815 97 ntBASIC1.6□□□□□ -2.15
CUEDC1Q9NWM3 RNA5SP220-201ENST00000516298 104 ntBASIC1.6□□□□□ -2.15
CUEDC1Q9NWM3 MIR618-201ENST00000385287 98 ntBASIC1.59□□□□□ -2.15
CUEDC1Q9NWM3 AC002429.1-201ENST00000437672 148 ntBASIC1.59□□□□□ -2.15
CUEDC1Q9NWM3 RNU7-174P-201ENST00000516248 59 ntBASIC1.59□□□□□ -2.15
CUEDC1Q9NWM3 U2.7-201ENST00000619197 100 ntBASIC1.59□□□□□ -2.15
CUEDC1Q9NWM3 RNU6-939P-201ENST00000384634 107 ntBASIC1.58□□□□□ -2.16
CUEDC1Q9NWM3 Y_RNA.633-201ENST00000459107 95 ntBASIC1.58□□□□□ -2.16
CUEDC1Q9NWM3 RNA5SP480-201ENST00000516840 109 ntBASIC1.58□□□□□ -2.16
CUEDC1Q9NWM3 MIR4452-201ENST00000583004 71 ntBASIC1.58□□□□□ -2.16
CUEDC1Q9NWM3 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC1.58□□□□□ -2.16
CUEDC1Q9NWM3 SNORD105-201ENST00000386910 85 ntBASIC1.57□□□□□ -2.16
CUEDC1Q9NWM3 MIR758-201ENST00000390227 88 ntBASIC1.57□□□□□ -2.16
CUEDC1Q9NWM3 U7.7-201ENST00000459276 60 ntBASIC1.57□□□□□ -2.16
CUEDC1Q9NWM3 AC021146.9-201ENST00000512503 156 ntBASIC1.57□□□□□ -2.16
CUEDC1Q9NWM3 RNA5SP363-201ENST00000365072 115 ntBASIC1.56□□□□□ -2.16
CUEDC1Q9NWM3 RNU6-269P-201ENST00000391077 97 ntBASIC1.56□□□□□ -2.16
CUEDC1Q9NWM3 FABP5P4-201ENST00000437203 171 ntBASIC1.56□□□□□ -2.16
CUEDC1Q9NWM3 RNU5B-6P-201ENST00000516765 68 ntBASIC1.56□□□□□ -2.16
CUEDC1Q9NWM3 SCARNA16.5-201ENST00000517114 183 ntBASIC1.56□□□□□ -2.16
CUEDC1Q9NWM3 RNA5SP404-201ENST00000517118 132 ntBASIC1.56□□□□□ -2.16
CUEDC1Q9NWM3 SNORD53B-201ENST00000577887 78 ntBASIC1.56□□□□□ -2.16
CUEDC1Q9NWM3 RNU6-716P-201ENST00000365621 103 ntBASIC1.55□□□□□ -2.16
CUEDC1Q9NWM3 RNU6-955P-201ENST00000410497 104 ntBASIC1.55□□□□□ -2.16
CUEDC1Q9NWM3 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.55□□□□□ -2.16
CUEDC1Q9NWM3 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
CUEDC1Q9NWM3 Y_RNA.379-201ENST00000365653 102 ntBASIC1.54□□□□□ -2.16
CUEDC1Q9NWM3 MIR517C-201ENST00000385103 95 ntBASIC1.54□□□□□ -2.16
CUEDC1Q9NWM3 RNU7-119P-201ENST00000459279 63 ntBASIC1.54□□□□□ -2.16
CUEDC1Q9NWM3 RNU1-92P-201ENST00000517017 135 ntBASIC1.54□□□□□ -2.16
CUEDC1Q9NWM3 U4.4-201ENST00000620626 117 ntBASIC1.54□□□□□ -2.16
CUEDC1Q9NWM3 RNU6-1312P-201ENST00000362425 108 ntBASIC1.53□□□□□ -2.16
CUEDC1Q9NWM3 SNORA63.6-201ENST00000364921 119 ntBASIC1.53□□□□□ -2.16
CUEDC1Q9NWM3 RNA5SP484-201ENST00000458857 111 ntBASIC1.53□□□□□ -2.16
CUEDC1Q9NWM3 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.53□□□□□ -2.16
CUEDC1Q9NWM3 SCARNA17.3-201ENST00000516381 125 ntBASIC1.53□□□□□ -2.16
CUEDC1Q9NWM3 MIR6734-201ENST00000621166 68 ntBASIC1.53□□□□□ -2.16
CUEDC1Q9NWM3 AL162376.1-201ENST00000624117 175 ntBASIC1.53□□□□□ -2.16
CUEDC1Q9NWM3 Y_RNA.125-201ENST00000363371 111 ntBASIC1.52□□□□□ -2.17
CUEDC1Q9NWM3 MIR19B1-201ENST00000384829 87 ntBASIC1.52□□□□□ -2.17
CUEDC1Q9NWM3 MIR200A-201ENST00000384875 90 ntBASIC1.52□□□□□ -2.17
CUEDC1Q9NWM3 MIR150-201ENST00000385048 84 ntBASIC1.52□□□□□ -2.17
CUEDC1Q9NWM3 SNORD89-201ENST00000390981 114 ntBASIC1.52□□□□□ -2.17
CUEDC1Q9NWM3 snoU13.13-201ENST00000458842 104 ntBASIC1.52□□□□□ -2.17
CUEDC1Q9NWM3 MIR3678-201ENST00000578455 94 ntBASIC1.52□□□□□ -2.17
CUEDC1Q9NWM3 SNORD114-26-201ENST00000363543 72 ntBASIC1.51□□□□□ -2.17
CUEDC1Q9NWM3 Y_RNA.407-201ENST00000383986 113 ntBASIC1.51□□□□□ -2.17
CUEDC1Q9NWM3 MIR1323-201ENST00000408090 73 ntBASIC1.51□□□□□ -2.17
CUEDC1Q9NWM3 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.51□□□□□ -2.17
CUEDC1Q9NWM3 MIR6828-201ENST00000636181 60 ntBASIC1.51□□□□□ -2.17
CUEDC1Q9NWM3 SNORA33.1-201ENST00000364957 130 ntBASIC1.5□□□□□ -2.17
CUEDC1Q9NWM3 MIR573-201ENST00000384964 99 ntBASIC1.5□□□□□ -2.17
CUEDC1Q9NWM3 RNU1-124P-201ENST00000363861 145 ntBASIC1.49□□□□□ -2.17
CUEDC1Q9NWM3 RNU4-88P-201ENST00000411220 86 ntBASIC1.49□□□□□ -2.17
CUEDC1Q9NWM3 RNA5SP102-201ENST00000516865 106 ntBASIC1.49□□□□□ -2.17
CUEDC1Q9NWM3 SNORD114-24-201ENST00000365029 72 ntBASIC1.48□□□□□ -2.17
CUEDC1Q9NWM3 MIR3612-201ENST00000579753 87 ntBASIC1.48□□□□□ -2.17
CUEDC1Q9NWM3 Y_RNA.246-201ENST00000364495 108 ntBASIC1.47□□□□□ -2.17
CUEDC1Q9NWM3 MIR652-201ENST00000385278 98 ntBASIC1.47□□□□□ -2.17
CUEDC1Q9NWM3 SNORA67.6-201ENST00000391093 99 ntBASIC1.47□□□□□ -2.17
CUEDC1Q9NWM3 SNORD124-201ENST00000459577 104 ntBASIC1.47□□□□□ -2.17
CUEDC1Q9NWM3 AC025627.3-201ENST00000582078 182 ntBASIC1.47□□□□□ -2.17
CUEDC1Q9NWM3 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.47□□□□□ -2.17
CUEDC1Q9NWM3 RNU1-42P-201ENST00000364033 160 ntBASIC1.46□□□□□ -2.18
CUEDC1Q9NWM3 MIR1304-201ENST00000408243 91 ntBASIC1.46□□□□□ -2.18
CUEDC1Q9NWM3 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.46□□□□□ -2.18
CUEDC1Q9NWM3 MIR4421-201ENST00000578133 69 ntBASIC1.46□□□□□ -2.18
CUEDC1Q9NWM3 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
CUEDC1Q9NWM3 MIR548AD-201ENST00000584780 82 ntBASIC1.44□□□□□ -2.18
CUEDC1Q9NWM3 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.44□□□□□ -2.18
CUEDC1Q9NWM3 RNU6-753P-201ENST00000363926 107 ntBASIC1.43□□□□□ -2.18
CUEDC1Q9NWM3 RNU4-45P-201ENST00000365469 141 ntBASIC1.43□□□□□ -2.18
CUEDC1Q9NWM3 MIR320A-201ENST00000385302 82 ntBASIC1.43□□□□□ -2.18
CUEDC1Q9NWM3 RNU6ATAC29P-201ENST00000408088 125 ntBASIC1.43□□□□□ -2.18
CUEDC1Q9NWM3 MIR548E-201ENST00000408287 88 ntBASIC1.43□□□□□ -2.18
CUEDC1Q9NWM3 AL354695.1-201ENST00000427935 228 ntBASIC1.43□□□□□ -2.18
CUEDC1Q9NWM3 AL021921.1-201ENST00000442774 93 ntBASIC1.43□□□□□ -2.18
CUEDC1Q9NWM3 RNA5SP227-201ENST00000516184 113 ntBASIC1.43□□□□□ -2.18
CUEDC1Q9NWM3 SNORA31.24-201ENST00000517232 57 ntBASIC1.43□□□□□ -2.18
CUEDC1Q9NWM3 SNORD114-22-201ENST00000365423 72 ntBASIC1.42□□□□□ -2.18
CUEDC1Q9NWM3 SNORA41B-201ENST00000384785 128 ntBASIC1.42□□□□□ -2.18
CUEDC1Q9NWM3 AC006210.1-201ENST00000424882 111 ntBASIC1.42□□□□□ -2.18
CUEDC1Q9NWM3 RNU6-231P-201ENST00000517122 103 ntBASIC1.42□□□□□ -2.18
CUEDC1Q9NWM3 AL353770.2-201ENST00000620024 78 ntBASIC1.42□□□□□ -2.18
CUEDC1Q9NWM3 Y_RNA.325-201ENST00000365171 122 ntBASIC1.41□□□□□ -2.18
CUEDC1Q9NWM3 MIR582-201ENST00000365731 98 ntBASIC1.41□□□□□ -2.18
CUEDC1Q9NWM3 SNORD110-201ENST00000408189 75 ntBASIC1.41□□□□□ -2.18
CUEDC1Q9NWM3 RNU6-980P-201ENST00000516925 103 ntBASIC1.41□□□□□ -2.18
CUEDC1Q9NWM3 MIR6078-201ENST00000611069 100 ntBASIC1.41□□□□□ -2.18
CUEDC1Q9NWM3 AC022709.1-201ENST00000615967 87 ntBASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms