Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 AC006160.2-201ENST00000637708 154 ntBASIC0.33□□□□□ -2.36
RLIMQ9NVW2 RNU6-1177P-201ENST00000391058 104 ntBASIC0.32□□□□□ -2.36
RLIMQ9NVW2 AL450471.1-201ENST00000447509 127 ntBASIC0.32□□□□□ -2.36
RLIMQ9NVW2 snoU13.17-201ENST00000458802 104 ntBASIC0.32□□□□□ -2.36
RLIMQ9NVW2 RNU6-848P-201ENST00000515948 107 ntBASIC0.32□□□□□ -2.36
RLIMQ9NVW2 RNU6-617P-201ENST00000516147 107 ntBASIC0.32□□□□□ -2.36
RLIMQ9NVW2 RNU6-473P-201ENST00000516164 107 ntBASIC0.32□□□□□ -2.36
RLIMQ9NVW2 RNU6-1049P-201ENST00000516414 107 ntBASIC0.32□□□□□ -2.36
RLIMQ9NVW2 RNA5SP134-201ENST00000516492 96 ntBASIC0.32□□□□□ -2.36
RLIMQ9NVW2 AC069113.3-201ENST00000521019 150 ntBASIC0.32□□□□□ -2.36
RLIMQ9NVW2 MIR548AE1-201ENST00000583292 70 ntBASIC0.32□□□□□ -2.36
RLIMQ9NVW2 Y_RNA.125-201ENST00000363371 111 ntBASIC0.31□□□□□ -2.36
RLIMQ9NVW2 Y_RNA.407-201ENST00000383986 113 ntBASIC0.31□□□□□ -2.36
RLIMQ9NVW2 Y_RNA.437-201ENST00000384113 113 ntBASIC0.31□□□□□ -2.36
RLIMQ9NVW2 SNORA50A-201ENST00000384225 134 ntBASIC0.31□□□□□ -2.36
RLIMQ9NVW2 MIR643-201ENST00000385267 97 ntBASIC0.31□□□□□ -2.36
RLIMQ9NVW2 RNU6-1108P-201ENST00000516308 104 ntBASIC0.31□□□□□ -2.36
RLIMQ9NVW2 MIR5588-201ENST00000581890 63 ntBASIC0.31□□□□□ -2.36
RLIMQ9NVW2 RNA5SP257-201ENST00000363023 116 ntBASIC0.3□□□□□ -2.36
RLIMQ9NVW2 SNORD73B-201ENST00000364394 72 ntBASIC0.3□□□□□ -2.36
RLIMQ9NVW2 Y_RNA.426-201ENST00000384068 113 ntBASIC0.3□□□□□ -2.36
RLIMQ9NVW2 SNORA24B-201ENST00000384176 131 ntBASIC0.3□□□□□ -2.36
RLIMQ9NVW2 MIR516B1-201ENST00000385211 90 ntBASIC0.3□□□□□ -2.36
RLIMQ9NVW2 RNU6-127P-201ENST00000390897 107 ntBASIC0.3□□□□□ -2.36
RLIMQ9NVW2 RNU6ATAC17P-201ENST00000516074 71 ntBASIC0.3□□□□□ -2.36
RLIMQ9NVW2 MIR4677-201ENST00000584153 80 ntBASIC0.3□□□□□ -2.36
RLIMQ9NVW2 AC062037.1-201ENST00000605302 128 ntBASIC0.3□□□□□ -2.36
RLIMQ9NVW2 uc_338.10-201ENST00000621872 182 ntBASIC0.3□□□□□ -2.36
RLIMQ9NVW2 RNU6-208P-201ENST00000362431 107 ntBASIC0.29□□□□□ -2.36
RLIMQ9NVW2 RNU6-161P-201ENST00000363051 106 ntBASIC0.29□□□□□ -2.36
RLIMQ9NVW2 VTRNA1-3-201ENST00000365645 89 ntBASIC0.29□□□□□ -2.36
RLIMQ9NVW2 RNU6-242P-201ENST00000384359 107 ntBASIC0.29□□□□□ -2.36
RLIMQ9NVW2 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.29□□□□□ -2.36
RLIMQ9NVW2 Y_RNA.681-201ENST00000516445 113 ntBASIC0.29□□□□□ -2.36
RLIMQ9NVW2 AC140658.3-201ENST00000567603 271 ntBASIC0.29□□□□□ -2.36
RLIMQ9NVW2 Y_RNA.68-201ENST00000362881 102 ntBASIC0.28□□□□□ -2.36
RLIMQ9NVW2 RNU6-154P-201ENST00000384306 106 ntBASIC0.28□□□□□ -2.36
RLIMQ9NVW2 AC108740.1-201ENST00000498629 225 ntBASIC0.28□□□□□ -2.36
RLIMQ9NVW2 MIR4514-201ENST00000581410 57 ntBASIC0.28□□□□□ -2.36
RLIMQ9NVW2 AC084368.1-201ENST00000620935 65 ntBASIC0.28□□□□□ -2.36
RLIMQ9NVW2 MIR4773-1-201ENST00000637203 78 ntBASIC0.28□□□□□ -2.36
RLIMQ9NVW2 Y_RNA.178-201ENST00000363832 102 ntBASIC0.27□□□□□ -2.37
RLIMQ9NVW2 Y_RNA.371-201ENST00000365591 113 ntBASIC0.27□□□□□ -2.37
RLIMQ9NVW2 SNORD77.2-201ENST00000391045 68 ntBASIC0.27□□□□□ -2.37
RLIMQ9NVW2 MIR548AD-201ENST00000584780 82 ntBASIC0.27□□□□□ -2.37
RLIMQ9NVW2 MIR2909-201ENST00000617113 69 ntBASIC0.27□□□□□ -2.37
RLIMQ9NVW2 SNORD42B-201ENST00000458893 67 ntBASIC0.26□□□□□ -2.37
RLIMQ9NVW2 AC097510.1-201ENST00000510945 133 ntBASIC0.26□□□□□ -2.37
RLIMQ9NVW2 MIR4679-1-201ENST00000637619 75 ntBASIC0.26□□□□□ -2.37
RLIMQ9NVW2 RNU6-824P-201ENST00000363724 104 ntBASIC0.25□□□□□ -2.37
RLIMQ9NVW2 RNU6-979P-201ENST00000383896 107 ntBASIC0.25□□□□□ -2.37
RLIMQ9NVW2 RNU6-820P-201ENST00000384273 107 ntBASIC0.25□□□□□ -2.37
RLIMQ9NVW2 MIR652-201ENST00000385278 98 ntBASIC0.25□□□□□ -2.37
RLIMQ9NVW2 Y_RNA.607-201ENST00000410597 98 ntBASIC0.25□□□□□ -2.37
RLIMQ9NVW2 RNU6-382P-201ENST00000365181 106 ntBASIC0.24□□□□□ -2.37
RLIMQ9NVW2 RNU6-652P-201ENST00000365488 107 ntBASIC0.24□□□□□ -2.37
RLIMQ9NVW2 SNORA26.2-201ENST00000390922 122 ntBASIC0.24□□□□□ -2.37
RLIMQ9NVW2 SNORA62.5-201ENST00000516634 120 ntBASIC0.24□□□□□ -2.37
RLIMQ9NVW2 MIR4315-1-201ENST00000636800 73 ntBASIC0.24□□□□□ -2.37
RLIMQ9NVW2 MIR4315-2-201ENST00000640925 73 ntBASIC0.24□□□□□ -2.37
RLIMQ9NVW2 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.24□□□□□ -2.37
RLIMQ9NVW2 RNU6-495P-201ENST00000362995 107 ntBASIC0.23□□□□□ -2.37
RLIMQ9NVW2 RNU6-1276P-201ENST00000365372 104 ntBASIC0.23□□□□□ -2.37
RLIMQ9NVW2 SNORD75.2-201ENST00000408784 58 ntBASIC0.23□□□□□ -2.37
RLIMQ9NVW2 RNU7-188P-201ENST00000517063 64 ntBASIC0.23□□□□□ -2.37
RLIMQ9NVW2 SCARNA11.2-201ENST00000517183 154 ntBASIC0.23□□□□□ -2.37
RLIMQ9NVW2 DLEU2_3.2-201ENST00000612883 73 ntBASIC0.23□□□□□ -2.37
RLIMQ9NVW2 RNY4P29-201ENST00000410801 97 ntBASIC0.22□□□□□ -2.37
RLIMQ9NVW2 RNU6-274P-201ENST00000459566 107 ntBASIC0.22□□□□□ -2.37
RLIMQ9NVW2 MIR3925-201ENST00000584674 77 ntBASIC0.22□□□□□ -2.37
RLIMQ9NVW2 Y_RNA.12-201ENST00000362393 112 ntBASIC0.21□□□□□ -2.38
RLIMQ9NVW2 RNU6-624P-201ENST00000363411 107 ntBASIC0.21□□□□□ -2.38
RLIMQ9NVW2 SNORD114-4-201ENST00000363962 75 ntBASIC0.21□□□□□ -2.38
RLIMQ9NVW2 Y_RNA.433-201ENST00000384089 102 ntBASIC0.21□□□□□ -2.38
RLIMQ9NVW2 RNU6-129P-201ENST00000391022 107 ntBASIC0.21□□□□□ -2.38
RLIMQ9NVW2 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.21□□□□□ -2.38
RLIMQ9NVW2 MIR5093-201ENST00000583199 100 ntBASIC0.21□□□□□ -2.38
RLIMQ9NVW2 AC104408.1-201ENST00000605241 170 ntBASIC0.21□□□□□ -2.38
RLIMQ9NVW2 Y_RNA.264-201ENST00000364665 102 ntBASIC0.2□□□□□ -2.38
RLIMQ9NVW2 MIR610-201ENST00000385139 96 ntBASIC0.2□□□□□ -2.38
RLIMQ9NVW2 RNA5SP63-201ENST00000391225 112 ntBASIC0.2□□□□□ -2.38
RLIMQ9NVW2 RNU6-782P-201ENST00000516852 104 ntBASIC0.2□□□□□ -2.38
RLIMQ9NVW2 AC023932.2-201ENST00000603176 175 ntBASIC0.2□□□□□ -2.38
RLIMQ9NVW2 SNORD114-29-201ENST00000364819 70 ntBASIC0.19□□□□□ -2.38
RLIMQ9NVW2 MIR593-201ENST00000384856 100 ntBASIC0.19□□□□□ -2.38
RLIMQ9NVW2 SNORA75.1-201ENST00000391130 148 ntBASIC0.19□□□□□ -2.38
RLIMQ9NVW2 RNU6-592P-201ENST00000411333 103 ntBASIC0.19□□□□□ -2.38
RLIMQ9NVW2 RNU7-171P-201ENST00000459581 62 ntBASIC0.19□□□□□ -2.38
RLIMQ9NVW2 Y_RNA.660-201ENST00000516002 120 ntBASIC0.19□□□□□ -2.38
RLIMQ9NVW2 SCARNA17.3-201ENST00000516381 125 ntBASIC0.19□□□□□ -2.38
RLIMQ9NVW2 U6.81-201ENST00000612550 106 ntBASIC0.19□□□□□ -2.38
RLIMQ9NVW2 RNU6-478P-201ENST00000363904 110 ntBASIC0.18□□□□□ -2.38
RLIMQ9NVW2 Y_RNA.316-201ENST00000365118 111 ntBASIC0.18□□□□□ -2.38
RLIMQ9NVW2 Y_RNA.388-201ENST00000383919 113 ntBASIC0.18□□□□□ -2.38
RLIMQ9NVW2 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC0.18□□□□□ -2.38
RLIMQ9NVW2 AL691482.2-201ENST00000457453 84 ntBASIC0.18□□□□□ -2.38
RLIMQ9NVW2 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.17□□□□□ -2.38
RLIMQ9NVW2 RNA5SP214-201ENST00000363378 118 ntBASIC0.17□□□□□ -2.38
RLIMQ9NVW2 RNA5SP173-201ENST00000364857 136 ntBASIC0.17□□□□□ -2.38
RLIMQ9NVW2 MIR203A-201ENST00000384836 110 ntBASIC0.17□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 167 ms