Protein–RNA interactions for Protein: Q9NV12

TMEM140, Transmembrane protein 140, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM140Q9NV12 RNU6-686P-201ENST00000364839 107 ntBASIC0.34□□□□□ -2.36
TMEM140Q9NV12 Y_RNA.313-201ENST00000365095 103 ntBASIC0.34□□□□□ -2.36
TMEM140Q9NV12 MIR516B1-201ENST00000385211 90 ntBASIC0.34□□□□□ -2.36
TMEM140Q9NV12 MIR652-201ENST00000385278 98 ntBASIC0.34□□□□□ -2.36
TMEM140Q9NV12 RNU6-127P-201ENST00000390897 107 ntBASIC0.34□□□□□ -2.36
TMEM140Q9NV12 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.34□□□□□ -2.36
TMEM140Q9NV12 AC108740.1-201ENST00000498629 225 ntBASIC0.34□□□□□ -2.36
TMEM140Q9NV12 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.33□□□□□ -2.36
TMEM140Q9NV12 RNU6-154P-201ENST00000384306 106 ntBASIC0.33□□□□□ -2.36
TMEM140Q9NV12 RNU7-24P-201ENST00000458867 62 ntBASIC0.33□□□□□ -2.36
TMEM140Q9NV12 DLEU2_3.2-201ENST00000612883 73 ntBASIC0.33□□□□□ -2.36
TMEM140Q9NV12 MIRLET7A1-201ENST00000362295 80 ntBASIC0.32□□□□□ -2.36
TMEM140Q9NV12 RNU6-340P-201ENST00000364005 107 ntBASIC0.32□□□□□ -2.36
TMEM140Q9NV12 Y_RNA.606-201ENST00000410579 103 ntBASIC0.32□□□□□ -2.36
TMEM140Q9NV12 RNA5SP134-201ENST00000516492 96 ntBASIC0.32□□□□□ -2.36
TMEM140Q9NV12 YWHAEP3-201ENST00000582767 121 ntBASIC0.32□□□□□ -2.36
TMEM140Q9NV12 MIR1245B-201ENST00000636115 69 ntBASIC0.32□□□□□ -2.36
TMEM140Q9NV12 MIR3925-201ENST00000584674 77 ntBASIC0.31□□□□□ -2.36
TMEM140Q9NV12 MIR6504-201ENST00000613520 61 ntBASIC0.31□□□□□ -2.36
TMEM140Q9NV12 MIR5087-201ENST00000635826 76 ntBASIC0.31□□□□□ -2.36
TMEM140Q9NV12 MIR643-201ENST00000385267 97 ntBASIC0.3□□□□□ -2.36
TMEM140Q9NV12 MIR4712-201ENST00000583750 82 ntBASIC0.3□□□□□ -2.36
TMEM140Q9NV12 MIR6788-201ENST00000618842 66 ntBASIC0.3□□□□□ -2.36
TMEM140Q9NV12 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.3□□□□□ -2.36
TMEM140Q9NV12 RNU6-315P-201ENST00000362666 107 ntBASIC0.29□□□□□ -2.36
TMEM140Q9NV12 MIR548J-201ENST00000408833 112 ntBASIC0.29□□□□□ -2.36
TMEM140Q9NV12 RNU6-274P-201ENST00000459566 107 ntBASIC0.29□□□□□ -2.36
TMEM140Q9NV12 SNORA72.7-201ENST00000516349 94 ntBASIC0.29□□□□□ -2.36
TMEM140Q9NV12 AC084368.1-201ENST00000620935 65 ntBASIC0.29□□□□□ -2.36
TMEM140Q9NV12 SNORD114-4-201ENST00000363962 75 ntBASIC0.28□□□□□ -2.36
TMEM140Q9NV12 Y_RNA.219-201ENST00000364232 113 ntBASIC0.28□□□□□ -2.36
TMEM140Q9NV12 RNU6-1124P-201ENST00000384169 107 ntBASIC0.28□□□□□ -2.36
TMEM140Q9NV12 Y_RNA.532-201ENST00000384590 113 ntBASIC0.28□□□□□ -2.36
TMEM140Q9NV12 SCARNA17.3-201ENST00000516381 125 ntBASIC0.28□□□□□ -2.36
TMEM140Q9NV12 RNU7-188P-201ENST00000517063 64 ntBASIC0.28□□□□□ -2.36
TMEM140Q9NV12 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC0.28□□□□□ -2.36
TMEM140Q9NV12 MIR151B-201ENST00000584249 96 ntBASIC0.28□□□□□ -2.36
TMEM140Q9NV12 MIR8070-201ENST00000616510 88 ntBASIC0.28□□□□□ -2.36
TMEM140Q9NV12 MIR3202-2-201ENST00000635980 79 ntBASIC0.28□□□□□ -2.36
TMEM140Q9NV12 RNU6-228P-201ENST00000362700 106 ntBASIC0.27□□□□□ -2.37
TMEM140Q9NV12 Y_RNA.94-201ENST00000363068 106 ntBASIC0.27□□□□□ -2.37
TMEM140Q9NV12 MIR5000-201ENST00000577717 103 ntBASIC0.27□□□□□ -2.37
TMEM140Q9NV12 MIR4452-201ENST00000583004 71 ntBASIC0.27□□□□□ -2.37
TMEM140Q9NV12 RNU6-681P-201ENST00000364012 104 ntBASIC0.26□□□□□ -2.37
TMEM140Q9NV12 RNU6-990P-201ENST00000364385 104 ntBASIC0.26□□□□□ -2.37
TMEM140Q9NV12 RNU6-1039P-201ENST00000383931 107 ntBASIC0.26□□□□□ -2.37
TMEM140Q9NV12 AL691482.2-201ENST00000457453 84 ntBASIC0.26□□□□□ -2.37
TMEM140Q9NV12 RNU6-782P-201ENST00000516852 104 ntBASIC0.26□□□□□ -2.37
TMEM140Q9NV12 RNU6-303P-201ENST00000517091 106 ntBASIC0.26□□□□□ -2.37
TMEM140Q9NV12 SCARNA11.2-201ENST00000517183 154 ntBASIC0.26□□□□□ -2.37
TMEM140Q9NV12 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC0.26□□□□□ -2.37
TMEM140Q9NV12 MIR4315-1-201ENST00000636800 73 ntBASIC0.26□□□□□ -2.37
TMEM140Q9NV12 MIR4315-2-201ENST00000640925 73 ntBASIC0.26□□□□□ -2.37
TMEM140Q9NV12 MIR203A-201ENST00000384836 110 ntBASIC0.25□□□□□ -2.37
TMEM140Q9NV12 AC243829.3-201ENST00000622177 108 ntBASIC0.25□□□□□ -2.37
TMEM140Q9NV12 MIR582-201ENST00000365731 98 ntBASIC0.24□□□□□ -2.37
TMEM140Q9NV12 SNORD78.1-201ENST00000390866 65 ntBASIC0.24□□□□□ -2.37
TMEM140Q9NV12 MIR1255A-201ENST00000408338 113 ntBASIC0.24□□□□□ -2.37
TMEM140Q9NV12 MIR4484-201ENST00000582855 83 ntBASIC0.24□□□□□ -2.37
TMEM140Q9NV12 MIR6509-201ENST00000614603 85 ntBASIC0.24□□□□□ -2.37
TMEM140Q9NV12 RN7SL660P-201ENST00000614852 299 ntBASIC0.24□□□□□ -2.37
TMEM140Q9NV12 SNORD114-29-201ENST00000364819 70 ntBASIC0.23□□□□□ -2.37
TMEM140Q9NV12 MIR876-201ENST00000401147 81 ntBASIC0.23□□□□□ -2.37
TMEM140Q9NV12 MIR548H2-201ENST00000408874 88 ntBASIC0.23□□□□□ -2.37
TMEM140Q9NV12 RNU6-380P-201ENST00000410207 107 ntBASIC0.23□□□□□ -2.37
TMEM140Q9NV12 AC243829.6-201ENST00000612652 106 ntBASIC0.23□□□□□ -2.37
TMEM140Q9NV12 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.22□□□□□ -2.37
TMEM140Q9NV12 MIR20A-201ENST00000362279 71 ntBASIC0.22□□□□□ -2.37
TMEM140Q9NV12 RNU6-1094P-201ENST00000362416 104 ntBASIC0.22□□□□□ -2.37
TMEM140Q9NV12 RNU6-330P-201ENST00000363015 107 ntBASIC0.22□□□□□ -2.37
TMEM140Q9NV12 RNA5SP325-201ENST00000363756 130 ntBASIC0.22□□□□□ -2.37
TMEM140Q9NV12 SNORA75.1-201ENST00000391130 148 ntBASIC0.22□□□□□ -2.37
TMEM140Q9NV12 MIR548E-201ENST00000408287 88 ntBASIC0.22□□□□□ -2.37
TMEM140Q9NV12 AC074348.1-201ENST00000426503 132 ntBASIC0.22□□□□□ -2.37
TMEM140Q9NV12 MIR6513-201ENST00000621188 64 ntBASIC0.22□□□□□ -2.37
TMEM140Q9NV12 AC244090.1-201ENST00000441884 93 ntBASIC0.21□□□□□ -2.38
TMEM140Q9NV12 RNU6-175P-201ENST00000516896 107 ntBASIC0.21□□□□□ -2.38
TMEM140Q9NV12 SNORA40.17-201ENST00000517256 115 ntBASIC0.21□□□□□ -2.38
TMEM140Q9NV12 AC104408.1-201ENST00000605241 170 ntBASIC0.21□□□□□ -2.38
TMEM140Q9NV12 Y_RNA.36-201ENST00000362602 112 ntBASIC0.2□□□□□ -2.38
TMEM140Q9NV12 RNU6-260P-201ENST00000384092 107 ntBASIC0.2□□□□□ -2.38
TMEM140Q9NV12 RNU6-752P-201ENST00000516376 102 ntBASIC0.2□□□□□ -2.38
TMEM140Q9NV12 MIR5093-201ENST00000583199 100 ntBASIC0.2□□□□□ -2.38
TMEM140Q9NV12 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
TMEM140Q9NV12 SNORA42.1-201ENST00000363515 137 ntBASIC0.19□□□□□ -2.38
TMEM140Q9NV12 VTRNA1-3-201ENST00000365645 89 ntBASIC0.19□□□□□ -2.38
TMEM140Q9NV12 RNA5SP225-201ENST00000410874 135 ntBASIC0.19□□□□□ -2.38
TMEM140Q9NV12 RNA5SP247-201ENST00000411181 105 ntBASIC0.19□□□□□ -2.38
TMEM140Q9NV12 RNU6-807P-201ENST00000516805 107 ntBASIC0.19□□□□□ -2.38
TMEM140Q9NV12 MIR3657-201ENST00000584818 117 ntBASIC0.19□□□□□ -2.38
TMEM140Q9NV12 RNA5SP214-201ENST00000363378 118 ntBASIC0.18□□□□□ -2.38
TMEM140Q9NV12 SNORA8.1-201ENST00000384250 140 ntBASIC0.18□□□□□ -2.38
TMEM140Q9NV12 MIR593-201ENST00000384856 100 ntBASIC0.18□□□□□ -2.38
TMEM140Q9NV12 SCARNA18B-201ENST00000458806 135 ntBASIC0.18□□□□□ -2.38
TMEM140Q9NV12 RNA5SP147-201ENST00000516493 109 ntBASIC0.18□□□□□ -2.38
TMEM140Q9NV12 RNU6-1223P-201ENST00000517124 104 ntBASIC0.18□□□□□ -2.38
TMEM140Q9NV12 MIR4711-201ENST00000578274 70 ntBASIC0.18□□□□□ -2.38
TMEM140Q9NV12 MIR1297-201ENST00000637311 77 ntBASIC0.18□□□□□ -2.38
TMEM140Q9NV12 Y_RNA.164-201ENST00000363709 102 ntBASIC0.17□□□□□ -2.38
TMEM140Q9NV12 MIR610-201ENST00000385139 96 ntBASIC0.17□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms