Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 RNU6-80P-201ENST00000384195 107 ntBASIC-1.17□□□□□ -2.6
TREX1Q9NSU2 Y_RNA.507-201ENST00000384500 99 ntBASIC-1.17□□□□□ -2.6
TREX1Q9NSU2 MIR606-201ENST00000384851 96 ntBASIC-1.17□□□□□ -2.6
TREX1Q9NSU2 MIR548A1-201ENST00000385041 97 ntBASIC-1.17□□□□□ -2.6
TREX1Q9NSU2 MIR507-201ENST00000385234 94 ntBASIC-1.17□□□□□ -2.6
TREX1Q9NSU2 SNORD75.2-201ENST00000408784 58 ntBASIC-1.17□□□□□ -2.6
TREX1Q9NSU2 RNU6-1018P-201ENST00000516577 106 ntBASIC-1.17□□□□□ -2.6
TREX1Q9NSU2 Y_RNA.145-201ENST00000363527 102 ntBASIC-1.18□□□□□ -2.6
TREX1Q9NSU2 SNORA33.1-201ENST00000364957 130 ntBASIC-1.18□□□□□ -2.6
TREX1Q9NSU2 RNU4-11P-201ENST00000365287 132 ntBASIC-1.18□□□□□ -2.6
TREX1Q9NSU2 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.18□□□□□ -2.6
TREX1Q9NSU2 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.18□□□□□ -2.6
TREX1Q9NSU2 Y_RNA.528-201ENST00000384575 108 ntBASIC-1.18□□□□□ -2.6
TREX1Q9NSU2 RNA5SP86-201ENST00000390869 98 ntBASIC-1.18□□□□□ -2.6
TREX1Q9NSU2 RNU6-460P-201ENST00000391158 108 ntBASIC-1.18□□□□□ -2.6
TREX1Q9NSU2 AL078595.1-201ENST00000404458 226 ntBASIC-1.18□□□□□ -2.6
TREX1Q9NSU2 RNA5SP136-201ENST00000410906 107 ntBASIC-1.18□□□□□ -2.6
TREX1Q9NSU2 RNU6-1333P-201ENST00000516162 93 ntBASIC-1.18□□□□□ -2.6
TREX1Q9NSU2 CYP3A54P-201ENST00000566950 75 ntBASIC-1.18□□□□□ -2.6
TREX1Q9NSU2 MIR3140-201ENST00000583685 90 ntBASIC-1.18□□□□□ -2.6
TREX1Q9NSU2 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-1.18□□□□□ -2.6
TREX1Q9NSU2 RNU6-915P-201ENST00000364943 103 ntBASIC-1.19□□□□□ -2.6
TREX1Q9NSU2 RNU6-1014P-201ENST00000383940 103 ntBASIC-1.19□□□□□ -2.6
TREX1Q9NSU2 Y_RNA.401-201ENST00000383965 117 ntBASIC-1.19□□□□□ -2.6
TREX1Q9NSU2 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.19□□□□□ -2.6
TREX1Q9NSU2 snoU13.17-201ENST00000458802 104 ntBASIC-1.19□□□□□ -2.6
TREX1Q9NSU2 AP002795.1-201ENST00000534879 84 ntBASIC-1.19□□□□□ -2.6
TREX1Q9NSU2 AL442128.1-201ENST00000615151 90 ntBASIC-1.19□□□□□ -2.6
TREX1Q9NSU2 RNU6-132P-201ENST00000383863 107 ntBASIC-1.2□□□□□ -2.6
TREX1Q9NSU2 Y_RNA.558-201ENST00000384685 113 ntBASIC-1.2□□□□□ -2.6
TREX1Q9NSU2 MIR1302-3-201ENST00000408128 138 ntBASIC-1.2□□□□□ -2.6
TREX1Q9NSU2 RNU7-154P-201ENST00000516194 62 ntBASIC-1.2□□□□□ -2.6
TREX1Q9NSU2 RNU6-65P-201ENST00000516332 98 ntBASIC-1.2□□□□□ -2.6
TREX1Q9NSU2 Y_RNA.680-201ENST00000516441 93 ntBASIC-1.2□□□□□ -2.6
TREX1Q9NSU2 MIR4536-1-201ENST00000583537 88 ntBASIC-1.2□□□□□ -2.6
TREX1Q9NSU2 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.21□□□□□ -2.6
TREX1Q9NSU2 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.21□□□□□ -2.6
TREX1Q9NSU2 SNORD50.2-201ENST00000365465 70 ntBASIC-1.21□□□□□ -2.6
TREX1Q9NSU2 RNU6-260P-201ENST00000384092 107 ntBASIC-1.21□□□□□ -2.6
TREX1Q9NSU2 MIR548H1-201ENST00000408610 102 ntBASIC-1.21□□□□□ -2.6
TREX1Q9NSU2 RNU7-85P-201ENST00000458851 63 ntBASIC-1.21□□□□□ -2.6
TREX1Q9NSU2 RNU6-732P-201ENST00000516033 103 ntBASIC-1.21□□□□□ -2.6
TREX1Q9NSU2 RNU6-1023P-201ENST00000516137 106 ntBASIC-1.21□□□□□ -2.6
TREX1Q9NSU2 RNU6-168P-201ENST00000516189 101 ntBASIC-1.21□□□□□ -2.6
TREX1Q9NSU2 Y_RNA.668-201ENST00000516233 93 ntBASIC-1.21□□□□□ -2.6
TREX1Q9NSU2 AC062037.2-201ENST00000610137 73 ntBASIC-1.21□□□□□ -2.6
TREX1Q9NSU2 U4.2-201ENST00000618561 85 ntBASIC-1.21□□□□□ -2.6
TREX1Q9NSU2 MIR365A-201ENST00000362260 87 ntBASIC-1.22□□□□□ -2.6
TREX1Q9NSU2 RNU6-774P-201ENST00000363238 107 ntBASIC-1.22□□□□□ -2.6
TREX1Q9NSU2 RNU6-704P-201ENST00000364162 103 ntBASIC-1.22□□□□□ -2.6
TREX1Q9NSU2 SNORD19-201ENST00000391191 68 ntBASIC-1.22□□□□□ -2.6
TREX1Q9NSU2 MIR1285-2-201ENST00000408311 88 ntBASIC-1.22□□□□□ -2.6
TREX1Q9NSU2 AC090616.4-201ENST00000448026 115 ntBASIC-1.22□□□□□ -2.6
TREX1Q9NSU2 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.22□□□□□ -2.6
TREX1Q9NSU2 MIR4490-201ENST00000582647 84 ntBASIC-1.22□□□□□ -2.6
TREX1Q9NSU2 AC072026.1-201ENST00000605023 201 ntBASIC-1.22□□□□□ -2.6
TREX1Q9NSU2 AC025521.1-201ENST00000621624 286 ntBASIC-1.22□□□□□ -2.6
TREX1Q9NSU2 MIR5683-201ENST00000636514 76 ntBASIC-1.22□□□□□ -2.6
TREX1Q9NSU2 SNORD114-3-201ENST00000364969 75 ntBASIC-1.23□□□□□ -2.61
TREX1Q9NSU2 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.23□□□□□ -2.61
TREX1Q9NSU2 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.23□□□□□ -2.61
TREX1Q9NSU2 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.23□□□□□ -2.61
TREX1Q9NSU2 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.23□□□□□ -2.61
TREX1Q9NSU2 RNA5SP180-201ENST00000516181 101 ntBASIC-1.23□□□□□ -2.61
TREX1Q9NSU2 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.23□□□□□ -2.61
TREX1Q9NSU2 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.23□□□□□ -2.61
TREX1Q9NSU2 SNORD115-27-201ENST00000364430 82 ntBASIC-1.24□□□□□ -2.61
TREX1Q9NSU2 Y_RNA.344-201ENST00000365381 112 ntBASIC-1.24□□□□□ -2.61
TREX1Q9NSU2 MIR519A2-201ENST00000384990 87 ntBASIC-1.24□□□□□ -2.61
TREX1Q9NSU2 RNU6-816P-201ENST00000390914 107 ntBASIC-1.24□□□□□ -2.61
TREX1Q9NSU2 RNU6-400P-201ENST00000391173 106 ntBASIC-1.24□□□□□ -2.61
TREX1Q9NSU2 RNU6-1268P-201ENST00000391214 107 ntBASIC-1.24□□□□□ -2.61
TREX1Q9NSU2 RNU6-1239P-201ENST00000391310 107 ntBASIC-1.24□□□□□ -2.61
TREX1Q9NSU2 MIR1207-201ENST00000408249 87 ntBASIC-1.24□□□□□ -2.61
TREX1Q9NSU2 RNA5SP147-201ENST00000516493 109 ntBASIC-1.24□□□□□ -2.61
TREX1Q9NSU2 MIR3064-201ENST00000581130 66 ntBASIC-1.24□□□□□ -2.61
TREX1Q9NSU2 MIR1246-201ENST00000636535 73 ntBASIC-1.24□□□□□ -2.61
TREX1Q9NSU2 RNU6-151P-201ENST00000364158 107 ntBASIC-1.25□□□□□ -2.61
TREX1Q9NSU2 RNU6-382P-201ENST00000365181 106 ntBASIC-1.25□□□□□ -2.61
TREX1Q9NSU2 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.25□□□□□ -2.61
TREX1Q9NSU2 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.25□□□□□ -2.61
TREX1Q9NSU2 RNU6-1271P-201ENST00000517049 105 ntBASIC-1.25□□□□□ -2.61
TREX1Q9NSU2 AP001094.1-201ENST00000579805 193 ntBASIC-1.25□□□□□ -2.61
TREX1Q9NSU2 RNU6-79P-201ENST00000362511 107 ntBASIC-1.26□□□□□ -2.61
TREX1Q9NSU2 RNY4P6-201ENST00000363667 96 ntBASIC-1.26□□□□□ -2.61
TREX1Q9NSU2 SNORD18.1-201ENST00000363807 70 ntBASIC-1.26□□□□□ -2.61
TREX1Q9NSU2 RNU6-540P-201ENST00000384622 101 ntBASIC-1.26□□□□□ -2.61
TREX1Q9NSU2 MIR548U-201ENST00000390728 81 ntBASIC-1.26□□□□□ -2.61
TREX1Q9NSU2 RPL35AP4-201ENST00000412007 102 ntBASIC-1.26□□□□□ -2.61
TREX1Q9NSU2 MTCYBP9-201ENST00000431021 303 ntBASIC-1.26□□□□□ -2.61
TREX1Q9NSU2 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-1.26□□□□□ -2.61
TREX1Q9NSU2 RNU7-197P-201ENST00000458836 62 ntBASIC-1.26□□□□□ -2.61
TREX1Q9NSU2 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.26□□□□□ -2.61
TREX1Q9NSU2 MIR3657-201ENST00000584818 117 ntBASIC-1.26□□□□□ -2.61
TREX1Q9NSU2 AC006254.2-201ENST00000603259 279 ntBASIC-1.26□□□□□ -2.61
TREX1Q9NSU2 AC141273.2-201ENST00000618989 130 ntBASIC-1.26□□□□□ -2.61
TREX1Q9NSU2 Y_RNA.163-201ENST00000363702 113 ntBASIC-1.27□□□□□ -2.61
TREX1Q9NSU2 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.27□□□□□ -2.61
TREX1Q9NSU2 MIR521-2-201ENST00000384818 87 ntBASIC-1.27□□□□□ -2.61
TREX1Q9NSU2 MIR203A-201ENST00000384836 110 ntBASIC-1.27□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms