Protein–RNA interactions for Protein: Q9NPD3

EXOSC4, Exosome complex component RRP41, humanhuman

Known RBP Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4Q9NPD3 SNORD114-25-201ENST00000363742 72 ntBASIC-0.92□□□□□ -2.56
EXOSC4Q9NPD3 RNU6-1177P-201ENST00000391058 104 ntBASIC-0.92□□□□□ -2.56
EXOSC4Q9NPD3 RNU6-592P-201ENST00000411333 103 ntBASIC-0.92□□□□□ -2.56
EXOSC4Q9NPD3 RNU6-795P-201ENST00000516323 103 ntBASIC-0.92□□□□□ -2.56
EXOSC4Q9NPD3 RNU6-971P-201ENST00000516920 106 ntBASIC-0.92□□□□□ -2.56
EXOSC4Q9NPD3 RNU7-200P-201ENST00000516105 62 ntBASIC-0.93□□□□□ -2.56
EXOSC4Q9NPD3 RNU6-346P-201ENST00000516288 111 ntBASIC-0.93□□□□□ -2.56
EXOSC4Q9NPD3 Y_RNA.681-201ENST00000516445 113 ntBASIC-0.93□□□□□ -2.56
EXOSC4Q9NPD3 MIR4777-201ENST00000583710 86 ntBASIC-0.93□□□□□ -2.56
EXOSC4Q9NPD3 SNORD115-23-201ENST00000364461 82 ntBASIC-0.94□□□□□ -2.56
EXOSC4Q9NPD3 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.94□□□□□ -2.56
EXOSC4Q9NPD3 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.94□□□□□ -2.56
EXOSC4Q9NPD3 RNU6-519P-201ENST00000410590 108 ntBASIC-0.94□□□□□ -2.56
EXOSC4Q9NPD3 RNU4-63P-201ENST00000411313 118 ntBASIC-0.94□□□□□ -2.56
EXOSC4Q9NPD3 AC021146.9-201ENST00000512503 156 ntBASIC-0.94□□□□□ -2.56
EXOSC4Q9NPD3 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.95□□□□□ -2.56
EXOSC4Q9NPD3 Y_RNA.343-201ENST00000365354 112 ntBASIC-0.95□□□□□ -2.56
EXOSC4Q9NPD3 SNORD33.1-201ENST00000516213 88 ntBASIC-0.95□□□□□ -2.56
EXOSC4Q9NPD3 SNORA18.5-201ENST00000516616 101 ntBASIC-0.95□□□□□ -2.56
EXOSC4Q9NPD3 AC108676.2-201ENST00000605225 163 ntBASIC-0.95□□□□□ -2.56
EXOSC4Q9NPD3 AC012531.4-201ENST00000616509 177 ntBASIC-0.95□□□□□ -2.56
EXOSC4Q9NPD3 AC090617.8-201ENST00000623339 167 ntBASIC-0.95□□□□□ -2.56
EXOSC4Q9NPD3 U6.96-201ENST00000636425 70 ntBASIC-0.95□□□□□ -2.56
EXOSC4Q9NPD3 RNU4-36P-201ENST00000364294 144 ntBASIC-0.96□□□□□ -2.56
EXOSC4Q9NPD3 SNORD74.6-201ENST00000364796 70 ntBASIC-0.96□□□□□ -2.56
EXOSC4Q9NPD3 MIR124-2-201ENST00000385081 109 ntBASIC-0.96□□□□□ -2.56
EXOSC4Q9NPD3 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.96□□□□□ -2.56
EXOSC4Q9NPD3 SNORD75.2-201ENST00000408784 58 ntBASIC-0.96□□□□□ -2.56
EXOSC4Q9NPD3 SNORD18.2-201ENST00000459604 70 ntBASIC-0.96□□□□□ -2.56
EXOSC4Q9NPD3 RNU6-758P-201ENST00000516292 89 ntBASIC-0.96□□□□□ -2.56
EXOSC4Q9NPD3 MIR4719-201ENST00000585233 84 ntBASIC-0.96□□□□□ -2.56
EXOSC4Q9NPD3 MIR3914-2-201ENST00000637339 95 ntBASIC-0.96□□□□□ -2.56
EXOSC4Q9NPD3 RNY1P7-201ENST00000384743 110 ntBASIC-0.97□□□□□ -2.56
EXOSC4Q9NPD3 SNORD83B-201ENST00000386745 93 ntBASIC-0.97□□□□□ -2.56
EXOSC4Q9NPD3 RNU6-208P-201ENST00000362431 107 ntBASIC-0.98□□□□□ -2.57
EXOSC4Q9NPD3 RNU6-382P-201ENST00000365181 106 ntBASIC-0.98□□□□□ -2.57
EXOSC4Q9NPD3 RNY4P3-201ENST00000365254 95 ntBASIC-0.98□□□□□ -2.57
EXOSC4Q9NPD3 MIR548A3-201ENST00000385297 97 ntBASIC-0.98□□□□□ -2.57
EXOSC4Q9NPD3 AL500527.2-201ENST00000454105 95 ntBASIC-0.98□□□□□ -2.57
EXOSC4Q9NPD3 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-0.98□□□□□ -2.57
EXOSC4Q9NPD3 RNU7-24P-201ENST00000458867 62 ntBASIC-0.98□□□□□ -2.57
EXOSC4Q9NPD3 RNA5SP147-201ENST00000516493 109 ntBASIC-0.98□□□□□ -2.57
EXOSC4Q9NPD3 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.98□□□□□ -2.57
EXOSC4Q9NPD3 RNU4-32P-201ENST00000363404 141 ntBASIC-0.99□□□□□ -2.57
EXOSC4Q9NPD3 RNA5SP368-201ENST00000364298 116 ntBASIC-0.99□□□□□ -2.57
EXOSC4Q9NPD3 MIR203A-201ENST00000384836 110 ntBASIC-0.99□□□□□ -2.57
EXOSC4Q9NPD3 MTATP6P29-201ENST00000415057 132 ntBASIC-0.99□□□□□ -2.57
EXOSC4Q9NPD3 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.99□□□□□ -2.57
EXOSC4Q9NPD3 RNU6-62P-201ENST00000516526 102 ntBASIC-0.99□□□□□ -2.57
EXOSC4Q9NPD3 Y_RNA.10-201ENST00000362371 110 ntBASIC-1□□□□□ -2.57
EXOSC4Q9NPD3 Y_RNA.246-201ENST00000364495 108 ntBASIC-1□□□□□ -2.57
EXOSC4Q9NPD3 SNORA19.1-201ENST00000410656 129 ntBASIC-1□□□□□ -2.57
EXOSC4Q9NPD3 RNU6-255P-201ENST00000516957 105 ntBASIC-1□□□□□ -2.57
EXOSC4Q9NPD3 YWHAEP3-201ENST00000582767 121 ntBASIC-1□□□□□ -2.57
EXOSC4Q9NPD3 MIR4773-1-201ENST00000637203 78 ntBASIC-1□□□□□ -2.57
EXOSC4Q9NPD3 RNU6-260P-201ENST00000384092 107 ntBASIC-1.01□□□□□ -2.57
EXOSC4Q9NPD3 Y_RNA.586-201ENST00000391146 98 ntBASIC-1.01□□□□□ -2.57
EXOSC4Q9NPD3 MIR548I1-201ENST00000408810 149 ntBASIC-1.01□□□□□ -2.57
EXOSC4Q9NPD3 snoU13.17-201ENST00000458802 104 ntBASIC-1.01□□□□□ -2.57
EXOSC4Q9NPD3 Y_RNA.712-201ENST00000517011 92 ntBASIC-1.01□□□□□ -2.57
EXOSC4Q9NPD3 RNU6-824P-201ENST00000363724 104 ntBASIC-1.02□□□□□ -2.57
EXOSC4Q9NPD3 SNORD95.1-201ENST00000364099 68 ntBASIC-1.02□□□□□ -2.57
EXOSC4Q9NPD3 RNU6-1014P-201ENST00000383940 103 ntBASIC-1.02□□□□□ -2.57
EXOSC4Q9NPD3 RNU6-80P-201ENST00000384195 107 ntBASIC-1.02□□□□□ -2.57
EXOSC4Q9NPD3 Y_RNA.506-201ENST00000384494 102 ntBASIC-1.02□□□□□ -2.57
EXOSC4Q9NPD3 AC006254.2-201ENST00000603259 279 ntBASIC-1.02□□□□□ -2.57
EXOSC4Q9NPD3 SNORD58A-201ENST00000383875 65 ntBASIC-1.03□□□□□ -2.57
EXOSC4Q9NPD3 SNORD64-201ENST00000386683 67 ntBASIC-1.03□□□□□ -2.57
EXOSC4Q9NPD3 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-1.03□□□□□ -2.57
EXOSC4Q9NPD3 Z95118.1-201ENST00000421372 247 ntBASIC-1.03□□□□□ -2.57
EXOSC4Q9NPD3 AC026421.1-201ENST00000519101 163 ntBASIC-1.03□□□□□ -2.57
EXOSC4Q9NPD3 AL353803.5-201ENST00000599815 141 ntBASIC-1.03□□□□□ -2.57
EXOSC4Q9NPD3 Y_RNA.218-201ENST00000364218 104 ntBASIC-1.04□□□□□ -2.58
EXOSC4Q9NPD3 SNORA33.1-201ENST00000364957 130 ntBASIC-1.04□□□□□ -2.58
EXOSC4Q9NPD3 SNORA62.4-201ENST00000365504 151 ntBASIC-1.04□□□□□ -2.58
EXOSC4Q9NPD3 RNU6-431P-201ENST00000383874 107 ntBASIC-1.04□□□□□ -2.58
EXOSC4Q9NPD3 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.04□□□□□ -2.58
EXOSC4Q9NPD3 Y_RNA.464-201ENST00000384282 110 ntBASIC-1.04□□□□□ -2.58
EXOSC4Q9NPD3 RNU6-907P-201ENST00000390924 102 ntBASIC-1.04□□□□□ -2.58
EXOSC4Q9NPD3 RNU6-659P-201ENST00000516454 104 ntBASIC-1.04□□□□□ -2.58
EXOSC4Q9NPD3 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-1.04□□□□□ -2.58
EXOSC4Q9NPD3 MIR6509-201ENST00000614603 85 ntBASIC-1.04□□□□□ -2.58
EXOSC4Q9NPD3 uc_338.19-201ENST00000616808 99 ntBASIC-1.04□□□□□ -2.58
EXOSC4Q9NPD3 U6.95-201ENST00000636931 70 ntBASIC-1.04□□□□□ -2.58
EXOSC4Q9NPD3 SNORD114-17-201ENST00000364699 75 ntBASIC-1.05□□□□□ -2.58
EXOSC4Q9NPD3 Y_RNA.281-201ENST00000364774 94 ntBASIC-1.05□□□□□ -2.58
EXOSC4Q9NPD3 SCARNA23-201ENST00000516060 130 ntBASIC-1.05□□□□□ -2.58
EXOSC4Q9NPD3 Y_RNA.705-201ENST00000516862 110 ntBASIC-1.05□□□□□ -2.58
EXOSC4Q9NPD3 MIR4464-201ENST00000580818 92 ntBASIC-1.05□□□□□ -2.58
EXOSC4Q9NPD3 Y_RNA.71-201ENST00000362892 104 ntBASIC-1.06□□□□□ -2.58
EXOSC4Q9NPD3 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.06□□□□□ -2.58
EXOSC4Q9NPD3 MIR4499-201ENST00000584834 69 ntBASIC-1.06□□□□□ -2.58
EXOSC4Q9NPD3 AC090425.1-201ENST00000610007 140 ntBASIC-1.06□□□□□ -2.58
EXOSC4Q9NPD3 RNU5F-1-201ENST00000362507 117 ntBASIC-1.07□□□□□ -2.58
EXOSC4Q9NPD3 Y_RNA.180-201ENST00000363867 113 ntBASIC-1.07□□□□□ -2.58
EXOSC4Q9NPD3 RNU6-1107P-201ENST00000364817 104 ntBASIC-1.07□□□□□ -2.58
EXOSC4Q9NPD3 RNU6-972P-201ENST00000391208 107 ntBASIC-1.07□□□□□ -2.58
EXOSC4Q9NPD3 MIR1255B2-201ENST00000408618 67 ntBASIC-1.07□□□□□ -2.58
EXOSC4Q9NPD3 RNU6-904P-201ENST00000516206 101 ntBASIC-1.07□□□□□ -2.58
EXOSC4Q9NPD3 RNU6-1212P-201ENST00000517023 104 ntBASIC-1.07□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 268 ms