Protein–RNA interactions for Protein: Q9HCL0

PCDH18, Protocadherin-18, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH18Q9HCL0 MIR146A-201ENST00000385201 99 ntBASIC0.9□□□□□ -2.27
PCDH18Q9HCL0 RNU6-982P-201ENST00000516216 102 ntBASIC0.9□□□□□ -2.27
PCDH18Q9HCL0 SNORA70.25-201ENST00000612741 95 ntBASIC0.9□□□□□ -2.27
PCDH18Q9HCL0 MIR6828-201ENST00000636181 60 ntBASIC0.9□□□□□ -2.27
PCDH18Q9HCL0 MIR6767-201ENST00000637302 66 ntBASIC0.9□□□□□ -2.27
PCDH18Q9HCL0 RNA5SP517-201ENST00000364724 117 ntBASIC0.89□□□□□ -2.27
PCDH18Q9HCL0 SNORA8.2-201ENST00000384372 139 ntBASIC0.89□□□□□ -2.27
PCDH18Q9HCL0 RNU6-649P-201ENST00000384463 107 ntBASIC0.89□□□□□ -2.27
PCDH18Q9HCL0 MIR216B-201ENST00000390186 82 ntBASIC0.89□□□□□ -2.27
PCDH18Q9HCL0 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.89□□□□□ -2.27
PCDH18Q9HCL0 AC069271.1-201ENST00000445577 156 ntBASIC0.89□□□□□ -2.27
PCDH18Q9HCL0 snoU13.13-201ENST00000458842 104 ntBASIC0.89□□□□□ -2.27
PCDH18Q9HCL0 RNA5SP102-201ENST00000516865 106 ntBASIC0.89□□□□□ -2.27
PCDH18Q9HCL0 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.89□□□□□ -2.27
PCDH18Q9HCL0 AL162376.1-201ENST00000624117 175 ntBASIC0.89□□□□□ -2.27
PCDH18Q9HCL0 Y_RNA.118-201ENST00000363300 101 ntBASIC0.88□□□□□ -2.27
PCDH18Q9HCL0 AC006210.1-201ENST00000424882 111 ntBASIC0.88□□□□□ -2.27
PCDH18Q9HCL0 RNU6-881P-201ENST00000516813 102 ntBASIC0.88□□□□□ -2.27
PCDH18Q9HCL0 MIR4698-201ENST00000577795 80 ntBASIC0.88□□□□□ -2.27
PCDH18Q9HCL0 MIR3973-201ENST00000579824 107 ntBASIC0.88□□□□□ -2.27
PCDH18Q9HCL0 MIR6857-201ENST00000613267 93 ntBASIC0.88□□□□□ -2.27
PCDH18Q9HCL0 MIR96-201ENST00000362288 78 ntBASIC0.87□□□□□ -2.27
PCDH18Q9HCL0 RNU6-663P-201ENST00000391105 106 ntBASIC0.87□□□□□ -2.27
PCDH18Q9HCL0 MIR548AE1-201ENST00000583292 70 ntBASIC0.87□□□□□ -2.27
PCDH18Q9HCL0 MIR3657-201ENST00000584818 117 ntBASIC0.87□□□□□ -2.27
PCDH18Q9HCL0 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
PCDH18Q9HCL0 MIR373-201ENST00000362273 69 ntBASIC0.86□□□□□ -2.27
PCDH18Q9HCL0 SNORD113.1-201ENST00000363280 73 ntBASIC0.86□□□□□ -2.27
PCDH18Q9HCL0 SNORD114-2-201ENST00000363953 78 ntBASIC0.86□□□□□ -2.27
PCDH18Q9HCL0 RNU6-260P-201ENST00000384092 107 ntBASIC0.86□□□□□ -2.27
PCDH18Q9HCL0 MIR608-201ENST00000384820 100 ntBASIC0.86□□□□□ -2.27
PCDH18Q9HCL0 SNORD110-201ENST00000408189 75 ntBASIC0.86□□□□□ -2.27
PCDH18Q9HCL0 RNU7-24P-201ENST00000458867 62 ntBASIC0.86□□□□□ -2.27
PCDH18Q9HCL0 RNU4-54P-201ENST00000516428 129 ntBASIC0.86□□□□□ -2.27
PCDH18Q9HCL0 MIR140-201ENST00000385282 100 ntBASIC0.85□□□□□ -2.27
PCDH18Q9HCL0 AL109933.3-201ENST00000619095 188 ntBASIC0.85□□□□□ -2.27
PCDH18Q9HCL0 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.84□□□□□ -2.27
PCDH18Q9HCL0 RNU6-351P-201ENST00000516097 100 ntBASIC0.84□□□□□ -2.27
PCDH18Q9HCL0 RNU6-752P-201ENST00000516376 102 ntBASIC0.84□□□□□ -2.27
PCDH18Q9HCL0 AC211469.2-201ENST00000605461 205 ntBASIC0.84□□□□□ -2.27
PCDH18Q9HCL0 AC069503.3-201ENST00000618674 145 ntBASIC0.84□□□□□ -2.27
PCDH18Q9HCL0 AC092634.7-201ENST00000621022 103 ntBASIC0.84□□□□□ -2.27
PCDH18Q9HCL0 MIR6734-201ENST00000621166 68 ntBASIC0.84□□□□□ -2.27
PCDH18Q9HCL0 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.84□□□□□ -2.27
PCDH18Q9HCL0 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.83□□□□□ -2.28
PCDH18Q9HCL0 SNORA40.17-201ENST00000517256 115 ntBASIC0.83□□□□□ -2.28
PCDH18Q9HCL0 MIR652-201ENST00000385278 98 ntBASIC0.82□□□□□ -2.28
PCDH18Q9HCL0 PSMC1P5-201ENST00000512850 177 ntBASIC0.82□□□□□ -2.28
PCDH18Q9HCL0 RNU6-539P-201ENST00000516665 103 ntBASIC0.82□□□□□ -2.28
PCDH18Q9HCL0 RNU6-1223P-201ENST00000517124 104 ntBASIC0.82□□□□□ -2.28
PCDH18Q9HCL0 MIR8053-201ENST00000613344 75 ntBASIC0.82□□□□□ -2.28
PCDH18Q9HCL0 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
PCDH18Q9HCL0 RNU4-45P-201ENST00000365469 141 ntBASIC0.81□□□□□ -2.28
PCDH18Q9HCL0 Y_RNA.423-201ENST00000384057 113 ntBASIC0.81□□□□□ -2.28
PCDH18Q9HCL0 RNU6-788P-201ENST00000390967 104 ntBASIC0.81□□□□□ -2.28
PCDH18Q9HCL0 RNU6-630P-201ENST00000391258 106 ntBASIC0.81□□□□□ -2.28
PCDH18Q9HCL0 RNU6-1232P-201ENST00000516299 86 ntBASIC0.81□□□□□ -2.28
PCDH18Q9HCL0 U6.111-201ENST00000636093 83 ntBASIC0.81□□□□□ -2.28
PCDH18Q9HCL0 RNU1-93P-201ENST00000364704 169 ntBASIC0.8□□□□□ -2.28
PCDH18Q9HCL0 SNORD116-24-201ENST00000384549 92 ntBASIC0.8□□□□□ -2.28
PCDH18Q9HCL0 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
PCDH18Q9HCL0 MIR7111-201ENST00000619751 72 ntBASIC0.8□□□□□ -2.28
PCDH18Q9HCL0 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.8□□□□□ -2.28
PCDH18Q9HCL0 RNU6-1216P-201ENST00000362590 107 ntBASIC0.79□□□□□ -2.28
PCDH18Q9HCL0 Y_RNA.340-201ENST00000365330 92 ntBASIC0.79□□□□□ -2.28
PCDH18Q9HCL0 RNU6-800P-201ENST00000384473 103 ntBASIC0.79□□□□□ -2.28
PCDH18Q9HCL0 MIR151B-201ENST00000584249 96 ntBASIC0.79□□□□□ -2.28
PCDH18Q9HCL0 Y_RNA.407-201ENST00000383986 113 ntBASIC0.78□□□□□ -2.28
PCDH18Q9HCL0 MIR4653-201ENST00000585107 83 ntBASIC0.78□□□□□ -2.28
PCDH18Q9HCL0 RNU1-29P-201ENST00000606574 126 ntBASIC0.78□□□□□ -2.28
PCDH18Q9HCL0 MIR6788-201ENST00000618842 66 ntBASIC0.78□□□□□ -2.28
PCDH18Q9HCL0 AC073869.9-201ENST00000641610 120 ntBASIC0.78□□□□□ -2.28
PCDH18Q9HCL0 RNU6-645P-201ENST00000364649 106 ntBASIC0.77□□□□□ -2.29
PCDH18Q9HCL0 SNORD114-22-201ENST00000365423 72 ntBASIC0.77□□□□□ -2.29
PCDH18Q9HCL0 MIR582-201ENST00000365731 98 ntBASIC0.77□□□□□ -2.29
PCDH18Q9HCL0 MIR6866-201ENST00000638146 69 ntBASIC0.77□□□□□ -2.29
PCDH18Q9HCL0 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.77□□□□□ -2.29
PCDH18Q9HCL0 Y_RNA.386-201ENST00000383913 105 ntBASIC0.76□□□□□ -2.29
PCDH18Q9HCL0 HMGN2P22-201ENST00000427588 175 ntBASIC0.76□□□□□ -2.29
PCDH18Q9HCL0 AC005520.4-201ENST00000604337 90 ntBASIC0.76□□□□□ -2.29
PCDH18Q9HCL0 SNORD118-201ENST00000363593 134 ntBASIC0.75□□□□□ -2.29
PCDH18Q9HCL0 Y_RNA.443-201ENST00000384135 111 ntBASIC0.75□□□□□ -2.29
PCDH18Q9HCL0 RNU6-110P-201ENST00000384508 104 ntBASIC0.75□□□□□ -2.29
PCDH18Q9HCL0 SNORA40.8-201ENST00000411034 126 ntBASIC0.75□□□□□ -2.29
PCDH18Q9HCL0 SNORA2.1-201ENST00000363089 137 ntBASIC0.74□□□□□ -2.29
PCDH18Q9HCL0 MIR548C-201ENST00000384815 97 ntBASIC0.74□□□□□ -2.29
PCDH18Q9HCL0 AC021146.9-201ENST00000512503 156 ntBASIC0.74□□□□□ -2.29
PCDH18Q9HCL0 RNU6-229P-201ENST00000516614 102 ntBASIC0.74□□□□□ -2.29
PCDH18Q9HCL0 SNORD114-4-201ENST00000363962 75 ntBASIC0.73□□□□□ -2.29
PCDH18Q9HCL0 RNU6-668P-201ENST00000364180 107 ntBASIC0.73□□□□□ -2.29
PCDH18Q9HCL0 RNU6-590P-201ENST00000365039 107 ntBASIC0.73□□□□□ -2.29
PCDH18Q9HCL0 MIR489-201ENST00000384923 84 ntBASIC0.73□□□□□ -2.29
PCDH18Q9HCL0 SNORD71-201ENST00000411292 86 ntBASIC0.73□□□□□ -2.29
PCDH18Q9HCL0 AC125388.1-201ENST00000459631 156 ntBASIC0.73□□□□□ -2.29
PCDH18Q9HCL0 SCARNA17.3-201ENST00000516381 125 ntBASIC0.73□□□□□ -2.29
PCDH18Q9HCL0 uc_338.10-201ENST00000621872 182 ntBASIC0.73□□□□□ -2.29
PCDH18Q9HCL0 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.72□□□□□ -2.29
PCDH18Q9HCL0 RNU6-656P-201ENST00000516785 107 ntBASIC0.72□□□□□ -2.29
PCDH18Q9HCL0 MIR520E-201ENST00000384867 87 ntBASIC0.71□□□□□ -2.3
PCDH18Q9HCL0 MIR598-201ENST00000384868 97 ntBASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 501.4 ms