Protein–RNA interactions for Protein: Q9H3S1

SEMA4A, Semaphorin-4A, humanhuman

Predictions only

Length 761 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4AQ9H3S1 SNORD115-44-201ENST00000365391 82 ntBASIC1.12□□□□□ -2.23
SEMA4AQ9H3S1 RNU6V-201ENST00000384105 107 ntBASIC1.12□□□□□ -2.23
SEMA4AQ9H3S1 SNORD42B-201ENST00000458893 67 ntBASIC1.12□□□□□ -2.23
SEMA4AQ9H3S1 MIR924-201ENST00000638017 53 ntBASIC1.12□□□□□ -2.23
SEMA4AQ9H3S1 MIR373-201ENST00000362273 69 ntBASIC1.11□□□□□ -2.23
SEMA4AQ9H3S1 MIR548L-201ENST00000408303 86 ntBASIC1.11□□□□□ -2.23
SEMA4AQ9H3S1 RNA5SP147-201ENST00000516493 109 ntBASIC1.11□□□□□ -2.23
SEMA4AQ9H3S1 U3.27-201ENST00000391237 200 ntBASIC1.1□□□□□ -2.23
SEMA4AQ9H3S1 MIR6509-201ENST00000614603 85 ntBASIC1.1□□□□□ -2.23
SEMA4AQ9H3S1 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
SEMA4AQ9H3S1 RNU6-1039P-201ENST00000383931 107 ntBASIC1.09□□□□□ -2.23
SEMA4AQ9H3S1 SNORD28-201ENST00000384706 75 ntBASIC1.09□□□□□ -2.23
SEMA4AQ9H3S1 MIR617-201ENST00000385030 97 ntBASIC1.09□□□□□ -2.23
SEMA4AQ9H3S1 SNORD75.2-201ENST00000408784 58 ntBASIC1.09□□□□□ -2.23
SEMA4AQ9H3S1 MIR3678-201ENST00000578455 94 ntBASIC1.09□□□□□ -2.23
SEMA4AQ9H3S1 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.09□□□□□ -2.23
SEMA4AQ9H3S1 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.09□□□□□ -2.24
SEMA4AQ9H3S1 RNU6-495P-201ENST00000362995 107 ntBASIC1.08□□□□□ -2.24
SEMA4AQ9H3S1 Y_RNA.115-201ENST00000363272 98 ntBASIC1.08□□□□□ -2.24
SEMA4AQ9H3S1 RNU6-990P-201ENST00000364385 104 ntBASIC1.08□□□□□ -2.24
SEMA4AQ9H3S1 Y_RNA.443-201ENST00000384135 111 ntBASIC1.08□□□□□ -2.24
SEMA4AQ9H3S1 RNU5B-6P-201ENST00000516765 68 ntBASIC1.08□□□□□ -2.24
SEMA4AQ9H3S1 RNU6-135P-201ENST00000516769 101 ntBASIC1.08□□□□□ -2.24
SEMA4AQ9H3S1 SNORD114-21-201ENST00000606412 72 ntBASIC1.08□□□□□ -2.24
SEMA4AQ9H3S1 MIR548O2-201ENST00000616090 70 ntBASIC1.08□□□□□ -2.24
SEMA4AQ9H3S1 RNU6-1216P-201ENST00000362590 107 ntBASIC1.07□□□□□ -2.24
SEMA4AQ9H3S1 SNORD18A-201ENST00000363753 72 ntBASIC1.07□□□□□ -2.24
SEMA4AQ9H3S1 RNU4-45P-201ENST00000365469 141 ntBASIC1.07□□□□□ -2.24
SEMA4AQ9H3S1 MIR532-201ENST00000385025 91 ntBASIC1.07□□□□□ -2.24
SEMA4AQ9H3S1 MIR3612-201ENST00000579753 87 ntBASIC1.07□□□□□ -2.24
SEMA4AQ9H3S1 AC103810.9-201ENST00000606688 112 ntBASIC1.07□□□□□ -2.24
SEMA4AQ9H3S1 MIR8053-201ENST00000613344 75 ntBASIC1.07□□□□□ -2.24
SEMA4AQ9H3S1 AC010487.4-201ENST00000637027 61 ntBASIC1.07□□□□□ -2.24
SEMA4AQ9H3S1 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.07□□□□□ -2.24
SEMA4AQ9H3S1 MIR573-201ENST00000384964 99 ntBASIC1.06□□□□□ -2.24
SEMA4AQ9H3S1 RNU6-469P-201ENST00000516253 101 ntBASIC1.06□□□□□ -2.24
SEMA4AQ9H3S1 RNU6-1187P-201ENST00000364771 110 ntBASIC1.05□□□□□ -2.24
SEMA4AQ9H3S1 RNU6-269P-201ENST00000391077 97 ntBASIC1.05□□□□□ -2.24
SEMA4AQ9H3S1 snoU13.13-201ENST00000458842 104 ntBASIC1.05□□□□□ -2.24
SEMA4AQ9H3S1 RNU6-726P-201ENST00000364680 107 ntBASIC1.04□□□□□ -2.24
SEMA4AQ9H3S1 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.04□□□□□ -2.24
SEMA4AQ9H3S1 MIR3657-201ENST00000584818 117 ntBASIC1.04□□□□□ -2.24
SEMA4AQ9H3S1 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.03□□□□□ -2.24
SEMA4AQ9H3S1 RNA5SP484-201ENST00000458857 111 ntBASIC1.03□□□□□ -2.24
SEMA4AQ9H3S1 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.03□□□□□ -2.24
SEMA4AQ9H3S1 RNA5SP121-201ENST00000516537 101 ntBASIC1.03□□□□□ -2.24
SEMA4AQ9H3S1 RNA5SP47-201ENST00000517230 109 ntBASIC1.03□□□□□ -2.24
SEMA4AQ9H3S1 SNORA40.17-201ENST00000517256 115 ntBASIC1.03□□□□□ -2.24
SEMA4AQ9H3S1 AC018659.1-201ENST00000551083 169 ntBASIC1.03□□□□□ -2.24
SEMA4AQ9H3S1 MIR4460-201ENST00000577862 86 ntBASIC1.03□□□□□ -2.24
SEMA4AQ9H3S1 AC011195.1-201ENST00000578177 177 ntBASIC1.03□□□□□ -2.24
SEMA4AQ9H3S1 MIR4639-201ENST00000584938 69 ntBASIC1.03□□□□□ -2.24
SEMA4AQ9H3S1 MIR6513-201ENST00000621188 64 ntBASIC1.03□□□□□ -2.24
SEMA4AQ9H3S1 SNORD114-23-201ENST00000363536 72 ntBASIC1.02□□□□□ -2.25
SEMA4AQ9H3S1 SNORA25.4-201ENST00000363666 124 ntBASIC1.02□□□□□ -2.25
SEMA4AQ9H3S1 RNU6-471P-201ENST00000383944 106 ntBASIC1.02□□□□□ -2.25
SEMA4AQ9H3S1 SNORD41.1-201ENST00000391000 69 ntBASIC1.02□□□□□ -2.25
SEMA4AQ9H3S1 RNA5SP257-201ENST00000363023 116 ntBASIC1.01□□□□□ -2.25
SEMA4AQ9H3S1 RNU6-260P-201ENST00000384092 107 ntBASIC1.01□□□□□ -2.25
SEMA4AQ9H3S1 SNORD99-201ENST00000408612 74 ntBASIC1.01□□□□□ -2.25
SEMA4AQ9H3S1 AC093423.1-201ENST00000440817 142 ntBASIC1.01□□□□□ -2.25
SEMA4AQ9H3S1 RNU7-24P-201ENST00000458867 62 ntBASIC1.01□□□□□ -2.25
SEMA4AQ9H3S1 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.01□□□□□ -2.25
SEMA4AQ9H3S1 RNU6-752P-201ENST00000516376 102 ntBASIC1.01□□□□□ -2.25
SEMA4AQ9H3S1 AL353765.1-201ENST00000605514 183 ntBASIC1.01□□□□□ -2.25
SEMA4AQ9H3S1 RNU4-38P-201ENST00000364472 129 ntBASIC1□□□□□ -2.25
SEMA4AQ9H3S1 RNU1-141P-201ENST00000364623 158 ntBASIC1□□□□□ -2.25
SEMA4AQ9H3S1 RNY1P8-201ENST00000383970 114 ntBASIC1□□□□□ -2.25
SEMA4AQ9H3S1 MT-TY-201ENST00000387409 66 ntBASIC1□□□□□ -2.25
SEMA4AQ9H3S1 RNA5SP330-201ENST00000517096 96 ntBASIC1□□□□□ -2.25
SEMA4AQ9H3S1 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1□□□□□ -2.25
SEMA4AQ9H3S1 RNU6-645P-201ENST00000364649 106 ntBASIC0.99□□□□□ -2.25
SEMA4AQ9H3S1 MIR3973-201ENST00000579824 107 ntBASIC0.99□□□□□ -2.25
SEMA4AQ9H3S1 SNORA36.1-201ENST00000363424 132 ntBASIC0.98□□□□□ -2.25
SEMA4AQ9H3S1 RNU6-668P-201ENST00000364180 107 ntBASIC0.98□□□□□ -2.25
SEMA4AQ9H3S1 RPL39P28-201ENST00000465655 155 ntBASIC0.98□□□□□ -2.25
SEMA4AQ9H3S1 MIR4752-201ENST00000579672 72 ntBASIC0.98□□□□□ -2.25
SEMA4AQ9H3S1 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.98□□□□□ -2.25
SEMA4AQ9H3S1 MIR18A-201ENST00000362310 71 ntBASIC0.97□□□□□ -2.25
SEMA4AQ9H3S1 RNA5SP222-201ENST00000411039 105 ntBASIC0.97□□□□□ -2.25
SEMA4AQ9H3S1 RNA5SP227-201ENST00000516184 113 ntBASIC0.97□□□□□ -2.25
SEMA4AQ9H3S1 MIR4473-201ENST00000583731 91 ntBASIC0.97□□□□□ -2.25
SEMA4AQ9H3S1 MIR608-201ENST00000384820 100 ntBASIC0.96□□□□□ -2.26
SEMA4AQ9H3S1 MIR216B-201ENST00000390186 82 ntBASIC0.96□□□□□ -2.26
SEMA4AQ9H3S1 MIR936-201ENST00000401264 98 ntBASIC0.96□□□□□ -2.26
SEMA4AQ9H3S1 SCARNA16.5-201ENST00000517114 183 ntBASIC0.96□□□□□ -2.26
SEMA4AQ9H3S1 MTND4LP1-201ENST00000446263 157 ntBASIC0.95□□□□□ -2.26
SEMA4AQ9H3S1 RNU7-74P-201ENST00000459104 62 ntBASIC0.95□□□□□ -2.26
SEMA4AQ9H3S1 MIR548AE1-201ENST00000583292 70 ntBASIC0.95□□□□□ -2.26
SEMA4AQ9H3S1 MIR548V-201ENST00000584165 80 ntBASIC0.95□□□□□ -2.26
SEMA4AQ9H3S1 MIR8087-201ENST00000612745 78 ntBASIC0.95□□□□□ -2.26
SEMA4AQ9H3S1 AC073869.9-201ENST00000641610 120 ntBASIC0.95□□□□□ -2.26
SEMA4AQ9H3S1 MIR548C-201ENST00000384815 97 ntBASIC0.94□□□□□ -2.26
SEMA4AQ9H3S1 MIR633-201ENST00000384821 98 ntBASIC0.94□□□□□ -2.26
SEMA4AQ9H3S1 RNU6-656P-201ENST00000516785 107 ntBASIC0.94□□□□□ -2.26
SEMA4AQ9H3S1 MIR4714-201ENST00000580728 77 ntBASIC0.94□□□□□ -2.26
SEMA4AQ9H3S1 MIR4511-201ENST00000582784 87 ntBASIC0.94□□□□□ -2.26
SEMA4AQ9H3S1 MIR330-201ENST00000362196 94 ntBASIC0.93□□□□□ -2.26
SEMA4AQ9H3S1 RNU6-110P-201ENST00000384508 104 ntBASIC0.93□□□□□ -2.26
SEMA4AQ9H3S1 RNA5SP268-201ENST00000516828 124 ntBASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 228.2 ms