Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 AC103810.9-201ENST00000606688 112 ntBASIC1.09□□□□□ -2.23
VPS11Q9H270 RNU1-141P-201ENST00000364623 158 ntBASIC1.08□□□□□ -2.24
VPS11Q9H270 RNA5SP117-201ENST00000365294 118 ntBASIC1.08□□□□□ -2.24
VPS11Q9H270 SNORD89-201ENST00000390981 114 ntBASIC1.08□□□□□ -2.24
VPS11Q9H270 RNU6-269P-201ENST00000391077 97 ntBASIC1.08□□□□□ -2.24
VPS11Q9H270 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.08□□□□□ -2.24
VPS11Q9H270 RNU6-1110P-201ENST00000516462 101 ntBASIC1.08□□□□□ -2.24
VPS11Q9H270 AC018659.1-201ENST00000551083 169 ntBASIC1.08□□□□□ -2.24
VPS11Q9H270 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.08□□□□□ -2.24
VPS11Q9H270 MIR6078-201ENST00000611069 100 ntBASIC1.08□□□□□ -2.24
VPS11Q9H270 SNORD113-4-201ENST00000364802 75 ntBASIC1.07□□□□□ -2.24
VPS11Q9H270 RNU6-1335P-201ENST00000365426 107 ntBASIC1.07□□□□□ -2.24
VPS11Q9H270 RNU6-716P-201ENST00000365621 103 ntBASIC1.07□□□□□ -2.24
VPS11Q9H270 AL157398.1-201ENST00000452981 186 ntBASIC1.07□□□□□ -2.24
VPS11Q9H270 RNU6-1089P-201ENST00000516473 104 ntBASIC1.07□□□□□ -2.24
VPS11Q9H270 RNU5B-6P-201ENST00000516765 68 ntBASIC1.07□□□□□ -2.24
VPS11Q9H270 MIR4460-201ENST00000577862 86 ntBASIC1.07□□□□□ -2.24
VPS11Q9H270 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
VPS11Q9H270 SNORD105-201ENST00000386910 85 ntBASIC1.06□□□□□ -2.24
VPS11Q9H270 snoU13.13-201ENST00000458842 104 ntBASIC1.06□□□□□ -2.24
VPS11Q9H270 RNA5SP484-201ENST00000458857 111 ntBASIC1.06□□□□□ -2.24
VPS11Q9H270 RNU6-135P-201ENST00000516769 101 ntBASIC1.06□□□□□ -2.24
VPS11Q9H270 AC025627.3-201ENST00000582078 182 ntBASIC1.06□□□□□ -2.24
VPS11Q9H270 RNU7-74P-201ENST00000459104 62 ntBASIC1.05□□□□□ -2.24
VPS11Q9H270 MIR3678-201ENST00000578455 94 ntBASIC1.05□□□□□ -2.24
VPS11Q9H270 SNORD114-21-201ENST00000606412 72 ntBASIC1.05□□□□□ -2.24
VPS11Q9H270 RNU6-940P-201ENST00000363433 104 ntBASIC1.04□□□□□ -2.24
VPS11Q9H270 RNA5SP215-201ENST00000363440 122 ntBASIC1.04□□□□□ -2.24
VPS11Q9H270 RNU6-392P-201ENST00000364926 101 ntBASIC1.04□□□□□ -2.24
VPS11Q9H270 MIR4295-201ENST00000585286 85 ntBASIC1.04□□□□□ -2.24
VPS11Q9H270 MIR7978-201ENST00000636158 59 ntBASIC1.04□□□□□ -2.24
VPS11Q9H270 MIR573-201ENST00000384964 99 ntBASIC1.03□□□□□ -2.24
VPS11Q9H270 MIR548L-201ENST00000408303 86 ntBASIC1.03□□□□□ -2.24
VPS11Q9H270 RNU6-122P-201ENST00000516818 107 ntBASIC1.03□□□□□ -2.24
VPS11Q9H270 MIR548V-201ENST00000584165 80 ntBASIC1.03□□□□□ -2.24
VPS11Q9H270 SNORD60.1-201ENST00000362451 73 ntBASIC1.02□□□□□ -2.25
VPS11Q9H270 Y_RNA.226-201ENST00000364337 114 ntBASIC1.02□□□□□ -2.25
VPS11Q9H270 SNORA8.2-201ENST00000384372 139 ntBASIC1.02□□□□□ -2.25
VPS11Q9H270 RNU6-469P-201ENST00000516253 101 ntBASIC1.02□□□□□ -2.25
VPS11Q9H270 SCARNA16.5-201ENST00000517114 183 ntBASIC1.02□□□□□ -2.25
VPS11Q9H270 MIR3612-201ENST00000579753 87 ntBASIC1.02□□□□□ -2.25
VPS11Q9H270 AL162376.1-201ENST00000624117 175 ntBASIC1.02□□□□□ -2.25
VPS11Q9H270 MIR582-201ENST00000365731 98 ntBASIC1.01□□□□□ -2.25
VPS11Q9H270 MIR630-201ENST00000384957 97 ntBASIC1.01□□□□□ -2.25
VPS11Q9H270 Y_RNA.633-201ENST00000459107 95 ntBASIC1.01□□□□□ -2.25
VPS11Q9H270 MIR548AE1-201ENST00000583292 70 ntBASIC1.01□□□□□ -2.25
VPS11Q9H270 RNU6-92P-201ENST00000605893 104 ntBASIC1.01□□□□□ -2.25
VPS11Q9H270 MIR8070-201ENST00000616510 88 ntBASIC1.01□□□□□ -2.25
VPS11Q9H270 U2.7-201ENST00000619197 100 ntBASIC1.01□□□□□ -2.25
VPS11Q9H270 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.01□□□□□ -2.25
VPS11Q9H270 MIR6828-201ENST00000636181 60 ntBASIC1.01□□□□□ -2.25
VPS11Q9H270 SNORA36.1-201ENST00000363424 132 ntBASIC1□□□□□ -2.25
VPS11Q9H270 MIR521-2-201ENST00000384818 87 ntBASIC1□□□□□ -2.25
VPS11Q9H270 MIR1287-201ENST00000408492 90 ntBASIC1□□□□□ -2.25
VPS11Q9H270 MIR3938-201ENST00000582157 103 ntBASIC1□□□□□ -2.25
VPS11Q9H270 Y_RNA.250-201ENST00000364542 110 ntBASIC0.99□□□□□ -2.25
VPS11Q9H270 SNORA33.1-201ENST00000364957 130 ntBASIC0.99□□□□□ -2.25
VPS11Q9H270 MIR608-201ENST00000384820 100 ntBASIC0.99□□□□□ -2.25
VPS11Q9H270 AC087343.1-201ENST00000477341 475 ntBASIC0.99□□□□□ -2.25
VPS11Q9H270 RNU7-174P-201ENST00000516248 59 ntBASIC0.99□□□□□ -2.25
VPS11Q9H270 AL353765.1-201ENST00000605514 183 ntBASIC0.99□□□□□ -2.25
VPS11Q9H270 U4.4-201ENST00000620626 117 ntBASIC0.99□□□□□ -2.25
VPS11Q9H270 RNU4-38P-201ENST00000364472 129 ntBASIC0.98□□□□□ -2.25
VPS11Q9H270 MIR499A-201ENST00000384903 122 ntBASIC0.98□□□□□ -2.25
VPS11Q9H270 MIR652-201ENST00000385278 98 ntBASIC0.98□□□□□ -2.25
VPS11Q9H270 MIR548E-201ENST00000408287 88 ntBASIC0.98□□□□□ -2.25
VPS11Q9H270 RPL39P28-201ENST00000465655 155 ntBASIC0.98□□□□□ -2.25
VPS11Q9H270 AC021146.9-201ENST00000512503 156 ntBASIC0.98□□□□□ -2.25
VPS11Q9H270 ACA64.5-201ENST00000516207 127 ntBASIC0.98□□□□□ -2.25
VPS11Q9H270 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.98□□□□□ -2.25
VPS11Q9H270 AC211469.2-201ENST00000605461 205 ntBASIC0.98□□□□□ -2.25
VPS11Q9H270 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.98□□□□□ -2.25
VPS11Q9H270 RNU6-1162P-201ENST00000384443 104 ntBASIC0.97□□□□□ -2.25
VPS11Q9H270 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.97□□□□□ -2.25
VPS11Q9H270 RNU6-302P-201ENST00000365249 107 ntBASIC0.96□□□□□ -2.26
VPS11Q9H270 MIR18A-201ENST00000362310 71 ntBASIC0.95□□□□□ -2.26
VPS11Q9H270 Y_RNA.125-201ENST00000363371 111 ntBASIC0.95□□□□□ -2.26
VPS11Q9H270 SNORD114-4-201ENST00000363962 75 ntBASIC0.95□□□□□ -2.26
VPS11Q9H270 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
VPS11Q9H270 MIR548C-201ENST00000384815 97 ntBASIC0.95□□□□□ -2.26
VPS11Q9H270 SCARNA17.3-201ENST00000516381 125 ntBASIC0.95□□□□□ -2.26
VPS11Q9H270 MIR4473-201ENST00000583731 91 ntBASIC0.95□□□□□ -2.26
VPS11Q9H270 MIR7107-201ENST00000611489 80 ntBASIC0.95□□□□□ -2.26
VPS11Q9H270 Y_RNA.224-201ENST00000364308 111 ntBASIC0.94□□□□□ -2.26
VPS11Q9H270 SNORA63.6-201ENST00000364921 119 ntBASIC0.94□□□□□ -2.26
VPS11Q9H270 SNORD99-201ENST00000408612 74 ntBASIC0.94□□□□□ -2.26
VPS11Q9H270 RNA5SP102-201ENST00000516865 106 ntBASIC0.94□□□□□ -2.26
VPS11Q9H270 RNU1-29P-201ENST00000606574 126 ntBASIC0.94□□□□□ -2.26
VPS11Q9H270 SNORA70.25-201ENST00000612741 95 ntBASIC0.94□□□□□ -2.26
VPS11Q9H270 RNU6-698P-201ENST00000363523 107 ntBASIC0.93□□□□□ -2.26
VPS11Q9H270 RNU6-34P-201ENST00000364874 107 ntBASIC0.93□□□□□ -2.26
VPS11Q9H270 Y_RNA.407-201ENST00000383986 113 ntBASIC0.93□□□□□ -2.26
VPS11Q9H270 RNU6-936P-201ENST00000384005 107 ntBASIC0.93□□□□□ -2.26
VPS11Q9H270 RNA5SP227-201ENST00000516184 113 ntBASIC0.93□□□□□ -2.26
VPS11Q9H270 Y_RNA.722-201ENST00000517279 114 ntBASIC0.93□□□□□ -2.26
VPS11Q9H270 AC090617.8-201ENST00000623339 167 ntBASIC0.93□□□□□ -2.26
VPS11Q9H270 SNORD114-27-201ENST00000363766 70 ntBASIC0.92□□□□□ -2.26
VPS11Q9H270 RNU6-1184P-201ENST00000384588 108 ntBASIC0.92□□□□□ -2.26
VPS11Q9H270 MIR517B-201ENST00000385102 67 ntBASIC0.92□□□□□ -2.26
VPS11Q9H270 RNU6-1246P-201ENST00000391064 107 ntBASIC0.92□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms