Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 MIR8070-201ENST00000616510 88 ntBASIC0.97□□□□□ -2.25
SSBP3Q9BWW4 MIR6828-201ENST00000636181 60 ntBASIC0.97□□□□□ -2.25
SSBP3Q9BWW4 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC0.97□□□□□ -2.25
SSBP3Q9BWW4 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.97□□□□□ -2.25
SSBP3Q9BWW4 RNU1-124P-201ENST00000363861 145 ntBASIC0.96□□□□□ -2.26
SSBP3Q9BWW4 RNU4-45P-201ENST00000365469 141 ntBASIC0.96□□□□□ -2.26
SSBP3Q9BWW4 RNU6-987P-201ENST00000384759 104 ntBASIC0.96□□□□□ -2.26
SSBP3Q9BWW4 RNU6-656P-201ENST00000516785 107 ntBASIC0.96□□□□□ -2.26
SSBP3Q9BWW4 RNA5SP404-201ENST00000517118 132 ntBASIC0.96□□□□□ -2.26
SSBP3Q9BWW4 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.96□□□□□ -2.26
SSBP3Q9BWW4 AL162376.1-201ENST00000624117 175 ntBASIC0.96□□□□□ -2.26
SSBP3Q9BWW4 MIR18A-201ENST00000362310 71 ntBASIC0.95□□□□□ -2.26
SSBP3Q9BWW4 MIR1285-1-201ENST00000408593 84 ntBASIC0.95□□□□□ -2.26
SSBP3Q9BWW4 SNORD99-201ENST00000408612 74 ntBASIC0.95□□□□□ -2.26
SSBP3Q9BWW4 RNU4-37P-201ENST00000410214 84 ntBASIC0.95□□□□□ -2.26
SSBP3Q9BWW4 AC087343.1-201ENST00000477341 475 ntBASIC0.95□□□□□ -2.26
SSBP3Q9BWW4 MIR4295-201ENST00000585286 85 ntBASIC0.95□□□□□ -2.26
SSBP3Q9BWW4 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.95□□□□□ -2.26
SSBP3Q9BWW4 AC092634.7-201ENST00000621022 103 ntBASIC0.95□□□□□ -2.26
SSBP3Q9BWW4 SNORA25.5-201ENST00000363782 126 ntBASIC0.94□□□□□ -2.26
SSBP3Q9BWW4 RNU6-1089P-201ENST00000516473 104 ntBASIC0.94□□□□□ -2.26
SSBP3Q9BWW4 RNA5SP268-201ENST00000516828 124 ntBASIC0.94□□□□□ -2.26
SSBP3Q9BWW4 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.93□□□□□ -2.26
SSBP3Q9BWW4 RNU6-940P-201ENST00000363433 104 ntBASIC0.93□□□□□ -2.26
SSBP3Q9BWW4 RNU6-302P-201ENST00000365249 107 ntBASIC0.93□□□□□ -2.26
SSBP3Q9BWW4 Y_RNA.407-201ENST00000383986 113 ntBASIC0.93□□□□□ -2.26
SSBP3Q9BWW4 MIR521-2-201ENST00000384818 87 ntBASIC0.93□□□□□ -2.26
SSBP3Q9BWW4 RNA5SP299-201ENST00000391203 116 ntBASIC0.93□□□□□ -2.26
SSBP3Q9BWW4 AC006210.1-201ENST00000424882 111 ntBASIC0.93□□□□□ -2.26
SSBP3Q9BWW4 OR2A41P-201ENST00000473586 105 ntBASIC0.93□□□□□ -2.26
SSBP3Q9BWW4 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.93□□□□□ -2.26
SSBP3Q9BWW4 SNORA40.17-201ENST00000517256 115 ntBASIC0.93□□□□□ -2.26
SSBP3Q9BWW4 RNA5SP247-201ENST00000411181 105 ntBASIC0.92□□□□□ -2.26
SSBP3Q9BWW4 RNA5SP102-201ENST00000516865 106 ntBASIC0.92□□□□□ -2.26
SSBP3Q9BWW4 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
SSBP3Q9BWW4 SNORA15B-2-201ENST00000384058 135 ntBASIC0.91□□□□□ -2.26
SSBP3Q9BWW4 SNORA15B-1-201ENST00000384334 135 ntBASIC0.91□□□□□ -2.26
SSBP3Q9BWW4 MIR548C-201ENST00000384815 97 ntBASIC0.91□□□□□ -2.26
SSBP3Q9BWW4 MIR499A-201ENST00000384903 122 ntBASIC0.91□□□□□ -2.26
SSBP3Q9BWW4 SNORD110-201ENST00000408189 75 ntBASIC0.91□□□□□ -2.26
SSBP3Q9BWW4 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.91□□□□□ -2.26
SSBP3Q9BWW4 snoU13.13-201ENST00000458842 104 ntBASIC0.91□□□□□ -2.26
SSBP3Q9BWW4 AC021146.9-201ENST00000512503 156 ntBASIC0.91□□□□□ -2.26
SSBP3Q9BWW4 SCARNA21.1-201ENST00000515996 128 ntBASIC0.91□□□□□ -2.26
SSBP3Q9BWW4 SCARNA17.3-201ENST00000516381 125 ntBASIC0.91□□□□□ -2.26
SSBP3Q9BWW4 SNORA36.1-201ENST00000363424 132 ntBASIC0.9□□□□□ -2.27
SSBP3Q9BWW4 RNA5SP192-201ENST00000364404 120 ntBASIC0.9□□□□□ -2.27
SSBP3Q9BWW4 MIR633-201ENST00000384821 98 ntBASIC0.9□□□□□ -2.27
SSBP3Q9BWW4 MIR1276-201ENST00000408707 83 ntBASIC0.9□□□□□ -2.27
SSBP3Q9BWW4 RNA5SP222-201ENST00000411039 105 ntBASIC0.9□□□□□ -2.27
SSBP3Q9BWW4 RNA5SP94-201ENST00000516917 108 ntBASIC0.9□□□□□ -2.27
SSBP3Q9BWW4 MIR548V-201ENST00000584165 80 ntBASIC0.9□□□□□ -2.27
SSBP3Q9BWW4 Y_RNA.226-201ENST00000364337 114 ntBASIC0.89□□□□□ -2.27
SSBP3Q9BWW4 RNU6-614P-201ENST00000384369 107 ntBASIC0.89□□□□□ -2.27
SSBP3Q9BWW4 MIR652-201ENST00000385278 98 ntBASIC0.89□□□□□ -2.27
SSBP3Q9BWW4 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
SSBP3Q9BWW4 AL157398.1-201ENST00000452981 186 ntBASIC0.89□□□□□ -2.27
SSBP3Q9BWW4 MIR466-201ENST00000580653 84 ntBASIC0.89□□□□□ -2.27
SSBP3Q9BWW4 MIR4473-201ENST00000583731 91 ntBASIC0.89□□□□□ -2.27
SSBP3Q9BWW4 MIR6504-201ENST00000613520 61 ntBASIC0.89□□□□□ -2.27
SSBP3Q9BWW4 U6.59-201ENST00000615686 107 ntBASIC0.89□□□□□ -2.27
SSBP3Q9BWW4 uc_338.10-201ENST00000621872 182 ntBASIC0.88□□□□□ -2.27
SSBP3Q9BWW4 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.88□□□□□ -2.27
SSBP3Q9BWW4 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.88□□□□□ -2.27
SSBP3Q9BWW4 SNORA63.6-201ENST00000364921 119 ntBASIC0.87□□□□□ -2.27
SSBP3Q9BWW4 MIR1287-201ENST00000408492 90 ntBASIC0.87□□□□□ -2.27
SSBP3Q9BWW4 AC079150.2-201ENST00000443733 78 ntBASIC0.87□□□□□ -2.27
SSBP3Q9BWW4 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.87□□□□□ -2.27
SSBP3Q9BWW4 RNU6-92P-201ENST00000605893 104 ntBASIC0.87□□□□□ -2.27
SSBP3Q9BWW4 MIR7107-201ENST00000611489 80 ntBASIC0.87□□□□□ -2.27
SSBP3Q9BWW4 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.87□□□□□ -2.27
SSBP3Q9BWW4 SNORD114-27-201ENST00000363766 70 ntBASIC0.86□□□□□ -2.27
SSBP3Q9BWW4 MIR517B-201ENST00000385102 67 ntBASIC0.86□□□□□ -2.27
SSBP3Q9BWW4 SNORD114-21-201ENST00000606412 72 ntBASIC0.86□□□□□ -2.27
SSBP3Q9BWW4 Y_RNA.633-201ENST00000459107 95 ntBASIC0.85□□□□□ -2.27
SSBP3Q9BWW4 AL353765.1-201ENST00000605514 183 ntBASIC0.85□□□□□ -2.27
SSBP3Q9BWW4 RNU6-1079P-201ENST00000362861 110 ntBASIC0.84□□□□□ -2.27
SSBP3Q9BWW4 Y_RNA.224-201ENST00000364308 111 ntBASIC0.84□□□□□ -2.27
SSBP3Q9BWW4 MIR630-201ENST00000384957 97 ntBASIC0.84□□□□□ -2.27
SSBP3Q9BWW4 SNORD113-2-201ENST00000391082 72 ntBASIC0.84□□□□□ -2.27
SSBP3Q9BWW4 MIR548AE1-201ENST00000583292 70 ntBASIC0.84□□□□□ -2.27
SSBP3Q9BWW4 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.83□□□□□ -2.28
SSBP3Q9BWW4 Y_RNA.125-201ENST00000363371 111 ntBASIC0.83□□□□□ -2.28
SSBP3Q9BWW4 RNU4-38P-201ENST00000364472 129 ntBASIC0.83□□□□□ -2.28
SSBP3Q9BWW4 SNORA33.1-201ENST00000364957 130 ntBASIC0.83□□□□□ -2.28
SSBP3Q9BWW4 SNORA36.2-201ENST00000384004 127 ntBASIC0.83□□□□□ -2.28
SSBP3Q9BWW4 MIR4661-201ENST00000582720 75 ntBASIC0.83□□□□□ -2.28
SSBP3Q9BWW4 MIR4452-201ENST00000583004 71 ntBASIC0.83□□□□□ -2.28
SSBP3Q9BWW4 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
SSBP3Q9BWW4 MIR96-201ENST00000362288 78 ntBASIC0.82□□□□□ -2.28
SSBP3Q9BWW4 RNU6-122P-201ENST00000516818 107 ntBASIC0.82□□□□□ -2.28
SSBP3Q9BWW4 MIR5706-201ENST00000579841 80 ntBASIC0.82□□□□□ -2.28
SSBP3Q9BWW4 SNORA70.25-201ENST00000612741 95 ntBASIC0.82□□□□□ -2.28
SSBP3Q9BWW4 RNU6-698P-201ENST00000363523 107 ntBASIC0.81□□□□□ -2.28
SSBP3Q9BWW4 RNU6-829P-201ENST00000363700 112 ntBASIC0.81□□□□□ -2.28
SSBP3Q9BWW4 RNU6-34P-201ENST00000364874 107 ntBASIC0.81□□□□□ -2.28
SSBP3Q9BWW4 SNORD114-22-201ENST00000365423 72 ntBASIC0.81□□□□□ -2.28
SSBP3Q9BWW4 MIR548E-201ENST00000408287 88 ntBASIC0.81□□□□□ -2.28
SSBP3Q9BWW4 RNU6-141P-201ENST00000410499 105 ntBASIC0.81□□□□□ -2.28
SSBP3Q9BWW4 MIR4752-201ENST00000579672 72 ntBASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 246.8 ms