Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 RPS29P1-201ENST00000465274 159 ntBASIC1.12□□□□□ -2.23
TRIM56Q9BRZ2 RNA5SP268-201ENST00000516828 124 ntBASIC1.12□□□□□ -2.23
TRIM56Q9BRZ2 RNA5SP94-201ENST00000516917 108 ntBASIC1.12□□□□□ -2.23
TRIM56Q9BRZ2 AC022709.1-201ENST00000615967 87 ntBASIC1.12□□□□□ -2.23
TRIM56Q9BRZ2 RNA5SP222-201ENST00000411039 105 ntBASIC1.11□□□□□ -2.23
TRIM56Q9BRZ2 AC125388.1-201ENST00000459631 156 ntBASIC1.11□□□□□ -2.23
TRIM56Q9BRZ2 MIR6515-201ENST00000619843 57 ntBASIC1.11□□□□□ -2.23
TRIM56Q9BRZ2 RNA5SP484-201ENST00000458857 111 ntBASIC1.1□□□□□ -2.23
TRIM56Q9BRZ2 OR2A41P-201ENST00000473586 105 ntBASIC1.1□□□□□ -2.23
TRIM56Q9BRZ2 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
TRIM56Q9BRZ2 RNU6-1216P-201ENST00000362590 107 ntBASIC1.09□□□□□ -2.23
TRIM56Q9BRZ2 SNORD113.1-201ENST00000363280 73 ntBASIC1.09□□□□□ -2.23
TRIM56Q9BRZ2 SNORA36.1-201ENST00000363424 132 ntBASIC1.09□□□□□ -2.23
TRIM56Q9BRZ2 RNU6-800P-201ENST00000384473 103 ntBASIC1.09□□□□□ -2.23
TRIM56Q9BRZ2 MIR608-201ENST00000384820 100 ntBASIC1.09□□□□□ -2.23
TRIM56Q9BRZ2 SNORD42B-201ENST00000458893 67 ntBASIC1.09□□□□□ -2.23
TRIM56Q9BRZ2 SNORD114-21-201ENST00000606412 72 ntBASIC1.09□□□□□ -2.23
TRIM56Q9BRZ2 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
TRIM56Q9BRZ2 RNU6-260P-201ENST00000384092 107 ntBASIC1.07□□□□□ -2.24
TRIM56Q9BRZ2 RNU6-110P-201ENST00000384508 104 ntBASIC1.07□□□□□ -2.24
TRIM56Q9BRZ2 MIR203A-201ENST00000384836 110 ntBASIC1.07□□□□□ -2.24
TRIM56Q9BRZ2 MIR3657-201ENST00000584818 117 ntBASIC1.07□□□□□ -2.24
TRIM56Q9BRZ2 MIR6767-201ENST00000637302 66 ntBASIC1.07□□□□□ -2.24
TRIM56Q9BRZ2 Y_RNA.340-201ENST00000365330 92 ntBASIC1.06□□□□□ -2.24
TRIM56Q9BRZ2 AC006210.1-201ENST00000424882 111 ntBASIC1.06□□□□□ -2.24
TRIM56Q9BRZ2 MTND4LP1-201ENST00000446263 157 ntBASIC1.06□□□□□ -2.24
TRIM56Q9BRZ2 MIR7107-201ENST00000611489 80 ntBASIC1.06□□□□□ -2.24
TRIM56Q9BRZ2 SNORA2.1-201ENST00000363089 137 ntBASIC1.05□□□□□ -2.24
TRIM56Q9BRZ2 SNORA25.4-201ENST00000363666 124 ntBASIC1.05□□□□□ -2.24
TRIM56Q9BRZ2 RNU6-630P-201ENST00000391258 106 ntBASIC1.05□□□□□ -2.24
TRIM56Q9BRZ2 RNU5B-6P-201ENST00000516765 68 ntBASIC1.05□□□□□ -2.24
TRIM56Q9BRZ2 RNU6-1223P-201ENST00000517124 104 ntBASIC1.05□□□□□ -2.24
TRIM56Q9BRZ2 MIR151B-201ENST00000584249 96 ntBASIC1.05□□□□□ -2.24
TRIM56Q9BRZ2 MIR6788-201ENST00000618842 66 ntBASIC1.05□□□□□ -2.24
TRIM56Q9BRZ2 PVT1_3.1-201ENST00000620853 95 ntBASIC1.05□□□□□ -2.24
TRIM56Q9BRZ2 SNORD114-26-201ENST00000363543 72 ntBASIC1.04□□□□□ -2.24
TRIM56Q9BRZ2 Y_RNA.443-201ENST00000384135 111 ntBASIC1.04□□□□□ -2.24
TRIM56Q9BRZ2 MIR548J-201ENST00000408833 112 ntBASIC1.04□□□□□ -2.24
TRIM56Q9BRZ2 MIR4295-201ENST00000585286 85 ntBASIC1.04□□□□□ -2.24
TRIM56Q9BRZ2 AC103810.9-201ENST00000606688 112 ntBASIC1.04□□□□□ -2.24
TRIM56Q9BRZ2 Y_RNA.386-201ENST00000383913 105 ntBASIC1.03□□□□□ -2.24
TRIM56Q9BRZ2 SNORA36.2-201ENST00000384004 127 ntBASIC1.03□□□□□ -2.24
TRIM56Q9BRZ2 AC087343.1-201ENST00000477341 475 ntBASIC1.03□□□□□ -2.24
TRIM56Q9BRZ2 Y_RNA.250-201ENST00000364542 110 ntBASIC1.02□□□□□ -2.25
TRIM56Q9BRZ2 Y_RNA.407-201ENST00000383986 113 ntBASIC1.02□□□□□ -2.25
TRIM56Q9BRZ2 MIR140-201ENST00000385282 100 ntBASIC1.02□□□□□ -2.25
TRIM56Q9BRZ2 SNORD110-201ENST00000408189 75 ntBASIC1.02□□□□□ -2.25
TRIM56Q9BRZ2 MIR6779-201ENST00000617283 64 ntBASIC1.02□□□□□ -2.25
TRIM56Q9BRZ2 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC1.02□□□□□ -2.25
TRIM56Q9BRZ2 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
TRIM56Q9BRZ2 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.01□□□□□ -2.25
TRIM56Q9BRZ2 AC005520.4-201ENST00000604337 90 ntBASIC1.01□□□□□ -2.25
TRIM56Q9BRZ2 AC211469.2-201ENST00000605461 205 ntBASIC1.01□□□□□ -2.25
TRIM56Q9BRZ2 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.01□□□□□ -2.25
TRIM56Q9BRZ2 RNU4-38P-201ENST00000364472 129 ntBASIC1□□□□□ -2.25
TRIM56Q9BRZ2 RNU6-471P-201ENST00000383944 106 ntBASIC1□□□□□ -2.25
TRIM56Q9BRZ2 SNORD116-24-201ENST00000384549 92 ntBASIC1□□□□□ -2.25
TRIM56Q9BRZ2 MIR598-201ENST00000384868 97 ntBASIC1□□□□□ -2.25
TRIM56Q9BRZ2 AC018659.1-201ENST00000551083 169 ntBASIC1□□□□□ -2.25
TRIM56Q9BRZ2 RNU6-982P-201ENST00000516216 102 ntBASIC0.99□□□□□ -2.25
TRIM56Q9BRZ2 AC092634.7-201ENST00000621022 103 ntBASIC0.99□□□□□ -2.25
TRIM56Q9BRZ2 RNA5SP325-201ENST00000363756 130 ntBASIC0.98□□□□□ -2.25
TRIM56Q9BRZ2 RNU6-668P-201ENST00000364180 107 ntBASIC0.98□□□□□ -2.25
TRIM56Q9BRZ2 RNU6-990P-201ENST00000364385 104 ntBASIC0.98□□□□□ -2.25
TRIM56Q9BRZ2 RNA5SP517-201ENST00000364724 117 ntBASIC0.97□□□□□ -2.25
TRIM56Q9BRZ2 MIR1265-201ENST00000408444 86 ntBASIC0.97□□□□□ -2.25
TRIM56Q9BRZ2 RNA5SP436-201ENST00000516020 115 ntBASIC0.97□□□□□ -2.25
TRIM56Q9BRZ2 ACA64.5-201ENST00000516207 127 ntBASIC0.97□□□□□ -2.25
TRIM56Q9BRZ2 RNA5SP147-201ENST00000516493 109 ntBASIC0.97□□□□□ -2.25
TRIM56Q9BRZ2 MIR5706-201ENST00000579841 80 ntBASIC0.97□□□□□ -2.25
TRIM56Q9BRZ2 MIR4473-201ENST00000583731 91 ntBASIC0.97□□□□□ -2.25
TRIM56Q9BRZ2 Y_RNA.205-201ENST00000364128 113 ntBASIC0.96□□□□□ -2.26
TRIM56Q9BRZ2 RNU6-645P-201ENST00000364649 106 ntBASIC0.96□□□□□ -2.26
TRIM56Q9BRZ2 RNY1P8-201ENST00000383970 114 ntBASIC0.96□□□□□ -2.26
TRIM56Q9BRZ2 SCARNA17.3-201ENST00000516381 125 ntBASIC0.96□□□□□ -2.26
TRIM56Q9BRZ2 SNORD71-201ENST00000411292 86 ntBASIC0.95□□□□□ -2.26
TRIM56Q9BRZ2 MIR6739-201ENST00000622461 75 ntBASIC0.95□□□□□ -2.26
TRIM56Q9BRZ2 MIR373-201ENST00000362273 69 ntBASIC0.94□□□□□ -2.26
TRIM56Q9BRZ2 RNU6-1162P-201ENST00000384443 104 ntBASIC0.94□□□□□ -2.26
TRIM56Q9BRZ2 SNORA40.8-201ENST00000411034 126 ntBASIC0.94□□□□□ -2.26
TRIM56Q9BRZ2 AL590095.2-201ENST00000604136 117 ntBASIC0.94□□□□□ -2.26
TRIM56Q9BRZ2 AC103706.3-201ENST00000636297 85 ntBASIC0.94□□□□□ -2.26
TRIM56Q9BRZ2 RNU6-1187P-201ENST00000364771 110 ntBASIC0.93□□□□□ -2.26
TRIM56Q9BRZ2 MIR532-201ENST00000385025 91 ntBASIC0.93□□□□□ -2.26
TRIM56Q9BRZ2 PSMC1P5-201ENST00000512850 177 ntBASIC0.93□□□□□ -2.26
TRIM56Q9BRZ2 SNORA40.17-201ENST00000517256 115 ntBASIC0.93□□□□□ -2.26
TRIM56Q9BRZ2 MIR4653-201ENST00000585107 83 ntBASIC0.93□□□□□ -2.26
TRIM56Q9BRZ2 U7.6-201ENST00000610841 64 ntBASIC0.93□□□□□ -2.26
TRIM56Q9BRZ2 SNORA70.25-201ENST00000612741 95 ntBASIC0.93□□□□□ -2.26
TRIM56Q9BRZ2 MIR652-201ENST00000385278 98 ntBASIC0.92□□□□□ -2.26
TRIM56Q9BRZ2 AC021146.9-201ENST00000512503 156 ntBASIC0.92□□□□□ -2.26
TRIM56Q9BRZ2 MIR4752-201ENST00000579672 72 ntBASIC0.92□□□□□ -2.26
TRIM56Q9BRZ2 SNORA25.18-201ENST00000607153 114 ntBASIC0.92□□□□□ -2.26
TRIM56Q9BRZ2 MIR6857-201ENST00000613267 93 ntBASIC0.92□□□□□ -2.26
TRIM56Q9BRZ2 uc_338.10-201ENST00000621872 182 ntBASIC0.92□□□□□ -2.26
TRIM56Q9BRZ2 SNORD118-201ENST00000363593 134 ntBASIC0.91□□□□□ -2.26
TRIM56Q9BRZ2 MIR4698-201ENST00000577795 80 ntBASIC0.91□□□□□ -2.26
TRIM56Q9BRZ2 MIR4511-201ENST00000582784 87 ntBASIC0.91□□□□□ -2.26
TRIM56Q9BRZ2 MIR548AE1-201ENST00000583292 70 ntBASIC0.91□□□□□ -2.26
TRIM56Q9BRZ2 SNORA63.6-201ENST00000364921 119 ntBASIC0.9□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 292.8 ms