Protein–RNA interactions for Protein: Q96NT0

CCDC115, Coiled-coil domain-containing protein 115, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC115Q96NT0 AL691482.2-201ENST00000457453 84 ntBASIC-3.06□□□□□ -2.9
CCDC115Q96NT0 Y_RNA.632-201ENST00000459189 102 ntBASIC-3.06□□□□□ -2.9
CCDC115Q96NT0 SNORD19B-201ENST00000459623 84 ntBASIC-3.06□□□□□ -2.9
CCDC115Q96NT0 RNU6-1174P-201ENST00000517278 101 ntBASIC-3.06□□□□□ -2.9
CCDC115Q96NT0 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-3.06□□□□□ -2.9
CCDC115Q96NT0 RNA5SP93-201ENST00000362525 114 ntBASIC-3.07□□□□□ -2.9
CCDC115Q96NT0 Y_RNA.505-201ENST00000384489 102 ntBASIC-3.07□□□□□ -2.9
CCDC115Q96NT0 Y_RNA.516-201ENST00000384541 124 ntBASIC-3.07□□□□□ -2.9
CCDC115Q96NT0 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-3.07□□□□□ -2.9
CCDC115Q96NT0 MTATP6P29-201ENST00000415057 132 ntBASIC-3.07□□□□□ -2.9
CCDC115Q96NT0 Y_RNA.686-201ENST00000516548 134 ntBASIC-3.07□□□□□ -2.9
CCDC115Q96NT0 MIR1302-1-201ENST00000637932 143 ntBASIC-3.07□□□□□ -2.9
CCDC115Q96NT0 Y_RNA.53-201ENST00000362765 102 ntBASIC-3.08□□□□□ -2.9
CCDC115Q96NT0 Y_RNA.197-201ENST00000364004 102 ntBASIC-3.08□□□□□ -2.9
CCDC115Q96NT0 Y_RNA.237-201ENST00000364439 102 ntBASIC-3.08□□□□□ -2.9
CCDC115Q96NT0 Y_RNA.352-201ENST00000365439 102 ntBASIC-3.08□□□□□ -2.9
CCDC115Q96NT0 MT-TM-201ENST00000387377 68 ntBASIC-3.08□□□□□ -2.9
CCDC115Q96NT0 MIR3646-201ENST00000578301 84 ntBASIC-3.08□□□□□ -2.9
CCDC115Q96NT0 Y_RNA.337-201ENST00000365312 102 ntBASIC-3.09□□□□□ -2.9
CCDC115Q96NT0 Y_RNA.529-201ENST00000384586 119 ntBASIC-3.09□□□□□ -2.9
CCDC115Q96NT0 RNU6-695P-201ENST00000391157 104 ntBASIC-3.09□□□□□ -2.9
CCDC115Q96NT0 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC-3.09□□□□□ -2.9
CCDC115Q96NT0 AC090971.5-201ENST00000621102 293 ntBASIC-3.09□□□□□ -2.9
CCDC115Q96NT0 RNU6-824P-201ENST00000363724 104 ntBASIC-3.1□□□□□ -2.91
CCDC115Q96NT0 Y_RNA.210-201ENST00000364161 110 ntBASIC-3.1□□□□□ -2.91
CCDC115Q96NT0 Y_RNA.315-201ENST00000365117 102 ntBASIC-3.1□□□□□ -2.91
CCDC115Q96NT0 MTND1P19-201ENST00000511780 315 ntBASIC-3.1□□□□□ -2.91
CCDC115Q96NT0 Y_RNA.75-201ENST00000362927 97 ntBASIC-3.11□□□□□ -2.91
CCDC115Q96NT0 Y_RNA.292-201ENST00000364904 97 ntBASIC-3.11□□□□□ -2.91
CCDC115Q96NT0 MIR548Z-201ENST00000584743 97 ntBASIC-3.11□□□□□ -2.91
CCDC115Q96NT0 MIR6739-201ENST00000622461 75 ntBASIC-3.11□□□□□ -2.91
CCDC115Q96NT0 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-3.11□□□□□ -2.91
CCDC115Q96NT0 RNA5SP405-201ENST00000363059 114 ntBASIC-3.12□□□□□ -2.91
CCDC115Q96NT0 RNU6-238P-201ENST00000363313 106 ntBASIC-3.12□□□□□ -2.91
CCDC115Q96NT0 SNORD90-201ENST00000391145 111 ntBASIC-3.12□□□□□ -2.91
CCDC115Q96NT0 SNORD4B-201ENST00000459083 72 ntBASIC-3.13□□□□□ -2.91
CCDC115Q96NT0 Y_RNA.421-201ENST00000384052 101 ntBASIC-3.14□□□□□ -2.91
CCDC115Q96NT0 MT-TL1-201ENST00000386347 75 ntBASIC-3.14□□□□□ -2.91
CCDC115Q96NT0 MIR548AG1-201ENST00000579932 66 ntBASIC-3.14□□□□□ -2.91
CCDC115Q96NT0 VTRNA2-1-201ENST00000602301 127 ntBASIC-3.14□□□□□ -2.91
CCDC115Q96NT0 RNU5F-1-201ENST00000362507 117 ntBASIC-3.15□□□□□ -2.91
CCDC115Q96NT0 Y_RNA.564-201ENST00000384708 106 ntBASIC-3.15□□□□□ -2.91
CCDC115Q96NT0 RNA5SP292-201ENST00000390974 118 ntBASIC-3.15□□□□□ -2.91
CCDC115Q96NT0 RNU6-876P-201ENST00000391295 104 ntBASIC-3.15□□□□□ -2.91
CCDC115Q96NT0 MIR548I1-201ENST00000408810 149 ntBASIC-3.15□□□□□ -2.91
CCDC115Q96NT0 MTND3P2-201ENST00000438452 342 ntBASIC-3.15□□□□□ -2.91
CCDC115Q96NT0 MIR23C-201ENST00000579846 100 ntBASIC-3.15□□□□□ -2.91
CCDC115Q96NT0 RNU6-151P-201ENST00000364158 107 ntBASIC-3.16□□□□□ -2.92
CCDC115Q96NT0 Y_RNA.344-201ENST00000365381 112 ntBASIC-3.16□□□□□ -2.92
CCDC115Q96NT0 RNU6-816P-201ENST00000390914 107 ntBASIC-3.16□□□□□ -2.92
CCDC115Q96NT0 RNU6-1268P-201ENST00000391214 107 ntBASIC-3.16□□□□□ -2.92
CCDC115Q96NT0 RNU6-1239P-201ENST00000391310 107 ntBASIC-3.16□□□□□ -2.92
CCDC115Q96NT0 RNA5SP136-201ENST00000410906 107 ntBASIC-3.16□□□□□ -2.92
CCDC115Q96NT0 Y_RNA.70-201ENST00000362886 110 ntBASIC-3.17□□□□□ -2.92
CCDC115Q96NT0 Y_RNA.204-201ENST00000364112 102 ntBASIC-3.17□□□□□ -2.92
CCDC115Q96NT0 SNORA18.5-201ENST00000516616 101 ntBASIC-3.17□□□□□ -2.92
CCDC115Q96NT0 RNU6-194P-201ENST00000363862 105 ntBASIC-3.18□□□□□ -2.92
CCDC115Q96NT0 RNU6-644P-201ENST00000391155 98 ntBASIC-3.18□□□□□ -2.92
CCDC115Q96NT0 RNU6-478P-201ENST00000363904 110 ntBASIC-3.19□□□□□ -2.92
CCDC115Q96NT0 RNU6-841P-201ENST00000383872 107 ntBASIC-3.19□□□□□ -2.92
CCDC115Q96NT0 MIR4643-201ENST00000577473 78 ntBASIC-3.19□□□□□ -2.92
CCDC115Q96NT0 Y_RNA.144-201ENST00000363521 113 ntBASIC-3.21□□□□□ -2.92
CCDC115Q96NT0 RNU6-608P-201ENST00000383927 104 ntBASIC-3.21□□□□□ -2.92
CCDC115Q96NT0 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC-3.21□□□□□ -2.92
CCDC115Q96NT0 MIR1263-201ENST00000408324 86 ntBASIC-3.22□□□□□ -2.92
CCDC115Q96NT0 MIR3121-201ENST00000579680 77 ntBASIC-3.22□□□□□ -2.92
CCDC115Q96NT0 U6.81-201ENST00000612550 106 ntBASIC-3.22□□□□□ -2.92
CCDC115Q96NT0 MIR577-201ENST00000385196 96 ntBASIC-3.23□□□□□ -2.93
CCDC115Q96NT0 SNORD37.2-201ENST00000391075 66 ntBASIC-3.23□□□□□ -2.93
CCDC115Q96NT0 MIR548P-201ENST00000408336 84 ntBASIC-3.23□□□□□ -2.93
CCDC115Q96NT0 RNU6-519P-201ENST00000410590 108 ntBASIC-3.23□□□□□ -2.93
CCDC115Q96NT0 DLEU2_3.2-201ENST00000612883 73 ntBASIC-3.23□□□□□ -2.93
CCDC115Q96NT0 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC-3.23□□□□□ -2.93
CCDC115Q96NT0 Y_RNA.395-201ENST00000383945 109 ntBASIC-3.24□□□□□ -2.93
CCDC115Q96NT0 Y_RNA.579-201ENST00000390939 94 ntBASIC-3.24□□□□□ -2.93
CCDC115Q96NT0 MIR3123-201ENST00000583417 75 ntBASIC-3.24□□□□□ -2.93
CCDC115Q96NT0 MIR4439-201ENST00000583746 80 ntBASIC-3.24□□□□□ -2.93
CCDC115Q96NT0 RNU6-1215P-201ENST00000384441 102 ntBASIC-3.25□□□□□ -2.93
CCDC115Q96NT0 RNU6-630P-201ENST00000391258 106 ntBASIC-3.25□□□□□ -2.93
CCDC115Q96NT0 RNU6-807P-201ENST00000516805 107 ntBASIC-3.25□□□□□ -2.93
CCDC115Q96NT0 MIR548AM-201ENST00000584298 74 ntBASIC-3.25□□□□□ -2.93
CCDC115Q96NT0 Y_RNA.248-201ENST00000364501 109 ntBASIC-3.26□□□□□ -2.93
CCDC115Q96NT0 Y_RNA.455-201ENST00000384230 98 ntBASIC-3.26□□□□□ -2.93
CCDC115Q96NT0 RNU6-696P-201ENST00000390834 107 ntBASIC-3.26□□□□□ -2.93
CCDC115Q96NT0 MIR4694-201ENST00000578534 80 ntBASIC-3.26□□□□□ -2.93
CCDC115Q96NT0 Y_RNA.211-201ENST00000364164 101 ntBASIC-3.27□□□□□ -2.93
CCDC115Q96NT0 Y_RNA.236-201ENST00000364427 111 ntBASIC-3.27□□□□□ -2.93
CCDC115Q96NT0 Y_RNA.400-201ENST00000383963 111 ntBASIC-3.27□□□□□ -2.93
CCDC115Q96NT0 RNU6-1152P-201ENST00000384576 107 ntBASIC-3.27□□□□□ -2.93
CCDC115Q96NT0 AL118496.2-201ENST00000448300 230 ntBASIC-3.27□□□□□ -2.93
CCDC115Q96NT0 AC113195.1-201ENST00000579952 141 ntBASIC-3.27□□□□□ -2.93
CCDC115Q96NT0 SNORD127-201ENST00000458892 86 ntBASIC-3.28□□□□□ -2.93
CCDC115Q96NT0 TARS-215ENST00000626210 201 ntTSL 5 BASIC-3.28□□□□□ -2.93
CCDC115Q96NT0 RNU6-752P-201ENST00000516376 102 ntBASIC-3.29□□□□□ -2.94
CCDC115Q96NT0 AC130289.1-201ENST00000577321 73 ntBASIC-3.29□□□□□ -2.94
CCDC115Q96NT0 AC103810.7-201ENST00000607821 91 ntBASIC-3.29□□□□□ -2.94
CCDC115Q96NT0 RNU6-832P-201ENST00000363319 107 ntBASIC-3.3□□□□□ -2.94
CCDC115Q96NT0 Y_RNA.318-201ENST00000365131 97 ntBASIC-3.3□□□□□ -2.94
CCDC115Q96NT0 RNU6-458P-201ENST00000384179 107 ntBASIC-3.3□□□□□ -2.94
CCDC115Q96NT0 U6.58-201ENST00000613107 107 ntBASIC-3.3□□□□□ -2.94
Retrieved 100 of 98,524 protein–RNA pairs in 250 ms