Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 MIR8053-201ENST00000613344 75 ntBASIC0.78□□□□□ -2.28
ZNF48Q96MX3 MIR6828-201ENST00000636181 60 ntBASIC0.78□□□□□ -2.28
ZNF48Q96MX3 RNU6-1039P-201ENST00000383931 107 ntBASIC0.77□□□□□ -2.29
ZNF48Q96MX3 MIR532-201ENST00000385025 91 ntBASIC0.77□□□□□ -2.29
ZNF48Q96MX3 MT-TY-201ENST00000387409 66 ntBASIC0.77□□□□□ -2.29
ZNF48Q96MX3 RNU6-604P-201ENST00000390917 100 ntBASIC0.77□□□□□ -2.29
ZNF48Q96MX3 RNU6-269P-201ENST00000391077 97 ntBASIC0.77□□□□□ -2.29
ZNF48Q96MX3 RNU6-663P-201ENST00000391105 106 ntBASIC0.77□□□□□ -2.29
ZNF48Q96MX3 SNORD42B-201ENST00000458893 67 ntBASIC0.77□□□□□ -2.29
ZNF48Q96MX3 AC011195.1-201ENST00000578177 177 ntBASIC0.77□□□□□ -2.29
ZNF48Q96MX3 RNU1-141P-201ENST00000364623 158 ntBASIC0.76□□□□□ -2.29
ZNF48Q96MX3 Y_RNA.386-201ENST00000383913 105 ntBASIC0.76□□□□□ -2.29
ZNF48Q96MX3 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
ZNF48Q96MX3 RNU6-881P-201ENST00000516813 102 ntBASIC0.76□□□□□ -2.29
ZNF48Q96MX3 MIR4698-201ENST00000577795 80 ntBASIC0.76□□□□□ -2.29
ZNF48Q96MX3 MIR4460-201ENST00000577862 86 ntBASIC0.76□□□□□ -2.29
ZNF48Q96MX3 AL162376.1-201ENST00000624117 175 ntBASIC0.76□□□□□ -2.29
ZNF48Q96MX3 U6.111-201ENST00000636093 83 ntBASIC0.76□□□□□ -2.29
ZNF48Q96MX3 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.75□□□□□ -2.29
ZNF48Q96MX3 SNORA36.1-201ENST00000363424 132 ntBASIC0.75□□□□□ -2.29
ZNF48Q96MX3 SNORA8.2-201ENST00000384372 139 ntBASIC0.75□□□□□ -2.29
ZNF48Q96MX3 MIR146A-201ENST00000385201 99 ntBASIC0.75□□□□□ -2.29
ZNF48Q96MX3 RNA5SP480-201ENST00000516840 109 ntBASIC0.75□□□□□ -2.29
ZNF48Q96MX3 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.75□□□□□ -2.29
ZNF48Q96MX3 MIR6509-201ENST00000614603 85 ntBASIC0.75□□□□□ -2.29
ZNF48Q96MX3 SNORD113.1-201ENST00000363280 73 ntBASIC0.74□□□□□ -2.29
ZNF48Q96MX3 RNU4-45P-201ENST00000365469 141 ntBASIC0.74□□□□□ -2.29
ZNF48Q96MX3 RNU6-895P-201ENST00000384125 103 ntBASIC0.74□□□□□ -2.29
ZNF48Q96MX3 MIR7-2-201ENST00000384970 110 ntBASIC0.74□□□□□ -2.29
ZNF48Q96MX3 RNA5SP484-201ENST00000458857 111 ntBASIC0.74□□□□□ -2.29
ZNF48Q96MX3 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.74□□□□□ -2.29
ZNF48Q96MX3 CYP3A137P-201ENST00000562436 69 ntBASIC0.74□□□□□ -2.29
ZNF48Q96MX3 MIR5000-201ENST00000577717 103 ntBASIC0.74□□□□□ -2.29
ZNF48Q96MX3 MIR6857-201ENST00000613267 93 ntBASIC0.74□□□□□ -2.29
ZNF48Q96MX3 RNU6-800P-201ENST00000384473 103 ntBASIC0.73□□□□□ -2.29
ZNF48Q96MX3 MIR598-201ENST00000384868 97 ntBASIC0.73□□□□□ -2.29
ZNF48Q96MX3 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.73□□□□□ -2.29
ZNF48Q96MX3 RNA5SP227-201ENST00000516184 113 ntBASIC0.73□□□□□ -2.29
ZNF48Q96MX3 RNA5SP94-201ENST00000516917 108 ntBASIC0.73□□□□□ -2.29
ZNF48Q96MX3 AL353765.1-201ENST00000605514 183 ntBASIC0.73□□□□□ -2.29
ZNF48Q96MX3 SNORD116-24-201ENST00000384549 92 ntBASIC0.72□□□□□ -2.29
ZNF48Q96MX3 MIR203A-201ENST00000384836 110 ntBASIC0.72□□□□□ -2.29
ZNF48Q96MX3 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
ZNF48Q96MX3 MIR1265-201ENST00000408444 86 ntBASIC0.72□□□□□ -2.29
ZNF48Q96MX3 RNA5SP268-201ENST00000516828 124 ntBASIC0.72□□□□□ -2.29
ZNF48Q96MX3 MIR3657-201ENST00000584818 117 ntBASIC0.72□□□□□ -2.29
ZNF48Q96MX3 RNU6-1216P-201ENST00000362590 107 ntBASIC0.71□□□□□ -2.3
ZNF48Q96MX3 Y_RNA.340-201ENST00000365330 92 ntBASIC0.71□□□□□ -2.3
ZNF48Q96MX3 SNORA40.17-201ENST00000517256 115 ntBASIC0.71□□□□□ -2.3
ZNF48Q96MX3 AC005520.4-201ENST00000604337 90 ntBASIC0.71□□□□□ -2.3
ZNF48Q96MX3 MIR7107-201ENST00000611489 80 ntBASIC0.71□□□□□ -2.3
ZNF48Q96MX3 AC069503.3-201ENST00000618674 145 ntBASIC0.71□□□□□ -2.3
ZNF48Q96MX3 AC073869.9-201ENST00000641610 120 ntBASIC0.71□□□□□ -2.3
ZNF48Q96MX3 RNU6-260P-201ENST00000384092 107 ntBASIC0.7□□□□□ -2.3
ZNF48Q96MX3 Y_RNA.443-201ENST00000384135 111 ntBASIC0.7□□□□□ -2.3
ZNF48Q96MX3 RNU6-630P-201ENST00000391258 106 ntBASIC0.7□□□□□ -2.3
ZNF48Q96MX3 RNA5SP222-201ENST00000411039 105 ntBASIC0.7□□□□□ -2.3
ZNF48Q96MX3 AC125388.1-201ENST00000459631 156 ntBASIC0.7□□□□□ -2.3
ZNF48Q96MX3 RNU6-982P-201ENST00000516216 102 ntBASIC0.7□□□□□ -2.3
ZNF48Q96MX3 RNU5B-6P-201ENST00000516765 68 ntBASIC0.7□□□□□ -2.3
ZNF48Q96MX3 AC018659.1-201ENST00000551083 169 ntBASIC0.7□□□□□ -2.3
ZNF48Q96MX3 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
ZNF48Q96MX3 SNORA2.1-201ENST00000363089 137 ntBASIC0.69□□□□□ -2.3
ZNF48Q96MX3 SNORA25.4-201ENST00000363666 124 ntBASIC0.69□□□□□ -2.3
ZNF48Q96MX3 RNU6-990P-201ENST00000364385 104 ntBASIC0.69□□□□□ -2.3
ZNF48Q96MX3 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.69□□□□□ -2.3
ZNF48Q96MX3 SNORD114-26-201ENST00000363543 72 ntBASIC0.68□□□□□ -2.3
ZNF48Q96MX3 RNY1P8-201ENST00000383970 114 ntBASIC0.68□□□□□ -2.3
ZNF48Q96MX3 MIR4714-201ENST00000580728 77 ntBASIC0.68□□□□□ -2.3
ZNF48Q96MX3 SNORD114-2-201ENST00000363953 78 ntBASIC0.67□□□□□ -2.3
ZNF48Q96MX3 SNORD114-4-201ENST00000363962 75 ntBASIC0.67□□□□□ -2.3
ZNF48Q96MX3 RNU6-471P-201ENST00000383944 106 ntBASIC0.67□□□□□ -2.3
ZNF48Q96MX3 AC006210.1-201ENST00000424882 111 ntBASIC0.67□□□□□ -2.3
ZNF48Q96MX3 RNU6-351P-201ENST00000516097 100 ntBASIC0.67□□□□□ -2.3
ZNF48Q96MX3 MIR6779-201ENST00000617283 64 ntBASIC0.67□□□□□ -2.3
ZNF48Q96MX3 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.66□□□□□ -2.3
ZNF48Q96MX3 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
ZNF48Q96MX3 Y_RNA.205-201ENST00000364128 113 ntBASIC0.66□□□□□ -2.3
ZNF48Q96MX3 RNA5SP147-201ENST00000516493 109 ntBASIC0.66□□□□□ -2.3
ZNF48Q96MX3 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.66□□□□□ -2.3
ZNF48Q96MX3 RNU6-645P-201ENST00000364649 106 ntBASIC0.65□□□□□ -2.31
ZNF48Q96MX3 RNA5SP517-201ENST00000364724 117 ntBASIC0.65□□□□□ -2.31
ZNF48Q96MX3 Y_RNA.407-201ENST00000383986 113 ntBASIC0.65□□□□□ -2.31
ZNF48Q96MX3 SNORD110-201ENST00000408189 75 ntBASIC0.65□□□□□ -2.31
ZNF48Q96MX3 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.65□□□□□ -2.31
ZNF48Q96MX3 SNORA70.25-201ENST00000612741 95 ntBASIC0.65□□□□□ -2.31
ZNF48Q96MX3 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.65□□□□□ -2.31
ZNF48Q96MX3 SNORA36.2-201ENST00000384004 127 ntBASIC0.64□□□□□ -2.31
ZNF48Q96MX3 MIR140-201ENST00000385282 100 ntBASIC0.64□□□□□ -2.31
ZNF48Q96MX3 MTND4LP1-201ENST00000446263 157 ntBASIC0.64□□□□□ -2.31
ZNF48Q96MX3 MIR4752-201ENST00000579672 72 ntBASIC0.64□□□□□ -2.31
ZNF48Q96MX3 MIR548AE1-201ENST00000583292 70 ntBASIC0.64□□□□□ -2.31
ZNF48Q96MX3 MIR4473-201ENST00000583731 91 ntBASIC0.64□□□□□ -2.31
ZNF48Q96MX3 RNU1-29P-201ENST00000606574 126 ntBASIC0.64□□□□□ -2.31
ZNF48Q96MX3 AL109933.3-201ENST00000619095 188 ntBASIC0.64□□□□□ -2.31
ZNF48Q96MX3 MIR6739-201ENST00000622461 75 ntBASIC0.64□□□□□ -2.31
ZNF48Q96MX3 RNU6-110P-201ENST00000384508 104 ntBASIC0.63□□□□□ -2.31
ZNF48Q96MX3 RNU6-668P-201ENST00000364180 107 ntBASIC0.62□□□□□ -2.31
ZNF48Q96MX3 Y_RNA.250-201ENST00000364542 110 ntBASIC0.62□□□□□ -2.31
ZNF48Q96MX3 MIR652-201ENST00000385278 98 ntBASIC0.62□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 228.3 ms