Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 RNU6-151P-201ENST00000364158 107 ntBASIC-1.31□□□□□ -2.62
ECHDC3Q96DC8 MIR517B-201ENST00000385102 67 ntBASIC-1.31□□□□□ -2.62
ECHDC3Q96DC8 AP000533.3-201ENST00000447704 118 ntBASIC-1.31□□□□□ -2.62
ECHDC3Q96DC8 MIRLET7F1-201ENST00000362202 87 ntBASIC-1.32□□□□□ -2.62
ECHDC3Q96DC8 SNORA63-201ENST00000363450 132 ntBASIC-1.32□□□□□ -2.62
ECHDC3Q96DC8 RNU6-682P-201ENST00000363843 106 ntBASIC-1.32□□□□□ -2.62
ECHDC3Q96DC8 SNORA63.6-201ENST00000364921 119 ntBASIC-1.32□□□□□ -2.62
ECHDC3Q96DC8 Y_RNA.297-201ENST00000364950 91 ntBASIC-1.32□□□□□ -2.62
ECHDC3Q96DC8 RNU6-431P-201ENST00000383874 107 ntBASIC-1.32□□□□□ -2.62
ECHDC3Q96DC8 RNU6-880P-201ENST00000384526 107 ntBASIC-1.32□□□□□ -2.62
ECHDC3Q96DC8 RNU7-85P-201ENST00000458851 63 ntBASIC-1.32□□□□□ -2.62
ECHDC3Q96DC8 RNU7-120P-201ENST00000459334 63 ntBASIC-1.32□□□□□ -2.62
ECHDC3Q96DC8 RNU6-65P-201ENST00000516332 98 ntBASIC-1.32□□□□□ -2.62
ECHDC3Q96DC8 RNU6-861P-201ENST00000516745 106 ntBASIC-1.32□□□□□ -2.62
ECHDC3Q96DC8 MIR4536-1-201ENST00000583537 88 ntBASIC-1.32□□□□□ -2.62
ECHDC3Q96DC8 MIR382-201ENST00000637119 76 ntBASIC-1.32□□□□□ -2.62
ECHDC3Q96DC8 RNU6-495P-201ENST00000362995 107 ntBASIC-1.33□□□□□ -2.62
ECHDC3Q96DC8 MIR577-201ENST00000385196 96 ntBASIC-1.33□□□□□ -2.62
ECHDC3Q96DC8 SNORD64-201ENST00000386683 67 ntBASIC-1.33□□□□□ -2.62
ECHDC3Q96DC8 Y_RNA.580-201ENST00000391004 95 ntBASIC-1.33□□□□□ -2.62
ECHDC3Q96DC8 RNU6-1052P-201ENST00000411398 104 ntBASIC-1.33□□□□□ -2.62
ECHDC3Q96DC8 RNU6-983P-201ENST00000516004 103 ntBASIC-1.33□□□□□ -2.62
ECHDC3Q96DC8 Y_RNA.662-201ENST00000516028 97 ntBASIC-1.33□□□□□ -2.62
ECHDC3Q96DC8 RNU6-719P-201ENST00000516671 104 ntBASIC-1.33□□□□□ -2.62
ECHDC3Q96DC8 MIR4770-201ENST00000579149 58 ntBASIC-1.33□□□□□ -2.62
ECHDC3Q96DC8 RNU6-905P-201ENST00000384434 107 ntBASIC-1.34□□□□□ -2.62
ECHDC3Q96DC8 snoR1.1-201ENST00000628177 80 ntBASIC-1.34□□□□□ -2.62
ECHDC3Q96DC8 SNORA63.2-201ENST00000362603 126 ntBASIC-1.35□□□□□ -2.63
ECHDC3Q96DC8 Y_RNA.163-201ENST00000363702 113 ntBASIC-1.35□□□□□ -2.63
ECHDC3Q96DC8 Y_RNA.193-201ENST00000363979 102 ntBASIC-1.35□□□□□ -2.63
ECHDC3Q96DC8 Y_RNA.346-201ENST00000365385 112 ntBASIC-1.35□□□□□ -2.63
ECHDC3Q96DC8 MIR496-201ENST00000385226 102 ntBASIC-1.35□□□□□ -2.63
ECHDC3Q96DC8 MIR513C-201ENST00000401352 84 ntBASIC-1.35□□□□□ -2.63
ECHDC3Q96DC8 MIR8485-201ENST00000401372 91 ntBASIC-1.35□□□□□ -2.63
ECHDC3Q96DC8 FGF7P7-201ENST00000514120 227 ntBASIC-1.35□□□□□ -2.63
ECHDC3Q96DC8 Y_RNA.228-201ENST00000364346 98 ntBASIC-1.36□□□□□ -2.63
ECHDC3Q96DC8 MIR4694-201ENST00000578534 80 ntBASIC-1.36□□□□□ -2.63
ECHDC3Q96DC8 U7.2-201ENST00000607576 63 ntBASIC-1.36□□□□□ -2.63
ECHDC3Q96DC8 RNU6-1130P-201ENST00000365434 107 ntBASIC-1.37□□□□□ -2.63
ECHDC3Q96DC8 RNU6-132P-201ENST00000383863 107 ntBASIC-1.37□□□□□ -2.63
ECHDC3Q96DC8 SNORA24B-201ENST00000384176 131 ntBASIC-1.37□□□□□ -2.63
ECHDC3Q96DC8 AL513043.2-201ENST00000573941 143 ntBASIC-1.37□□□□□ -2.63
ECHDC3Q96DC8 Y_RNA.420-201ENST00000384043 110 ntBASIC-1.38□□□□□ -2.63
ECHDC3Q96DC8 MIR147A-201ENST00000385079 72 ntBASIC-1.38□□□□□ -2.63
ECHDC3Q96DC8 AL118496.2-201ENST00000448300 230 ntBASIC-1.38□□□□□ -2.63
ECHDC3Q96DC8 RNU7-24P-201ENST00000458867 62 ntBASIC-1.38□□□□□ -2.63
ECHDC3Q96DC8 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.38□□□□□ -2.63
ECHDC3Q96DC8 AC025166.1-201ENST00000612411 163 ntBASIC-1.38□□□□□ -2.63
ECHDC3Q96DC8 RNU6-119P-201ENST00000364882 107 ntBASIC-1.39□□□□□ -2.63
ECHDC3Q96DC8 MIR548X2-201ENST00000579776 100 ntBASIC-1.39□□□□□ -2.63
ECHDC3Q96DC8 MIR4503-201ENST00000582187 83 ntBASIC-1.39□□□□□ -2.63
ECHDC3Q96DC8 YWHAEP3-201ENST00000582767 121 ntBASIC-1.39□□□□□ -2.63
ECHDC3Q96DC8 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-1.39□□□□□ -2.63
ECHDC3Q96DC8 RNU6-832P-201ENST00000363319 107 ntBASIC-1.4□□□□□ -2.63
ECHDC3Q96DC8 SNORD58C-201ENST00000365223 64 ntBASIC-1.4□□□□□ -2.63
ECHDC3Q96DC8 RNU6-394P-201ENST00000410735 107 ntBASIC-1.4□□□□□ -2.63
ECHDC3Q96DC8 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.4□□□□□ -2.63
ECHDC3Q96DC8 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-1.4□□□□□ -2.63
ECHDC3Q96DC8 MIR3140-201ENST00000583685 90 ntBASIC-1.4□□□□□ -2.63
ECHDC3Q96DC8 AL445584.3-201ENST00000617173 78 ntBASIC-1.4□□□□□ -2.63
ECHDC3Q96DC8 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.41□□□□□ -2.64
ECHDC3Q96DC8 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.41□□□□□ -2.64
ECHDC3Q96DC8 MIR3064-201ENST00000581130 66 ntBASIC-1.41□□□□□ -2.64
ECHDC3Q96DC8 MIR4439-201ENST00000583746 80 ntBASIC-1.41□□□□□ -2.64
ECHDC3Q96DC8 Y_RNA.190-201ENST00000363964 101 ntBASIC-1.42□□□□□ -2.64
ECHDC3Q96DC8 SNORA62.4-201ENST00000365504 151 ntBASIC-1.42□□□□□ -2.64
ECHDC3Q96DC8 MIR4679-2-201ENST00000578358 77 ntBASIC-1.42□□□□□ -2.64
ECHDC3Q96DC8 RNY3P2-201ENST00000362918 102 ntBASIC-1.43□□□□□ -2.64
ECHDC3Q96DC8 RNU6-990P-201ENST00000364385 104 ntBASIC-1.43□□□□□ -2.64
ECHDC3Q96DC8 Y_RNA.309-201ENST00000365046 111 ntBASIC-1.43□□□□□ -2.64
ECHDC3Q96DC8 MIR548U-201ENST00000390728 81 ntBASIC-1.43□□□□□ -2.64
ECHDC3Q96DC8 SNORD75.2-201ENST00000408784 58 ntBASIC-1.43□□□□□ -2.64
ECHDC3Q96DC8 RNU6-327P-201ENST00000516270 127 ntBASIC-1.43□□□□□ -2.64
ECHDC3Q96DC8 AC132825.6-201ENST00000638861 357 ntBASIC-1.43□□□□□ -2.64
ECHDC3Q96DC8 SNORD116-18-201ENST00000383961 92 ntBASIC-1.44□□□□□ -2.64
ECHDC3Q96DC8 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.44□□□□□ -2.64
ECHDC3Q96DC8 RNU6-479P-201ENST00000516348 105 ntBASIC-1.44□□□□□ -2.64
ECHDC3Q96DC8 AC068339.1-201ENST00000526965 141 ntBASIC-1.44□□□□□ -2.64
ECHDC3Q96DC8 MIR3613-201ENST00000579844 87 ntBASIC-1.44□□□□□ -2.64
ECHDC3Q96DC8 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.44□□□□□ -2.64
ECHDC3Q96DC8 RNU6-200P-201ENST00000364743 107 ntBASIC-1.45□□□□□ -2.64
ECHDC3Q96DC8 MIR569-201ENST00000385228 96 ntBASIC-1.45□□□□□ -2.64
ECHDC3Q96DC8 RNU6-644P-201ENST00000391155 98 ntBASIC-1.45□□□□□ -2.64
ECHDC3Q96DC8 SNORD18.2-201ENST00000459604 70 ntBASIC-1.45□□□□□ -2.64
ECHDC3Q96DC8 AC104996.3-201ENST00000590718 94 ntBASIC-1.45□□□□□ -2.64
ECHDC3Q96DC8 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.46□□□□□ -2.64
ECHDC3Q96DC8 Y_RNA.489-201ENST00000384410 101 ntBASIC-1.46□□□□□ -2.64
ECHDC3Q96DC8 SNORD4B-201ENST00000459083 72 ntBASIC-1.46□□□□□ -2.64
ECHDC3Q96DC8 MIR4520-1-201ENST00000582609 70 ntBASIC-1.46□□□□□ -2.64
ECHDC3Q96DC8 SNORD18.1-201ENST00000363807 70 ntBASIC-1.47□□□□□ -2.64
ECHDC3Q96DC8 RNU7-134P-201ENST00000458997 64 ntBASIC-1.47□□□□□ -2.64
ECHDC3Q96DC8 MIR4464-201ENST00000580818 92 ntBASIC-1.47□□□□□ -2.64
ECHDC3Q96DC8 AL035470.1-201ENST00000622571 220 ntBASIC-1.47□□□□□ -2.64
ECHDC3Q96DC8 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.48□□□□□ -2.65
ECHDC3Q96DC8 Y_RNA.400-201ENST00000383963 111 ntBASIC-1.48□□□□□ -2.65
ECHDC3Q96DC8 RNU6-196P-201ENST00000384315 107 ntBASIC-1.48□□□□□ -2.65
ECHDC3Q96DC8 MIR548A1-201ENST00000385041 97 ntBASIC-1.48□□□□□ -2.65
ECHDC3Q96DC8 MTND3P2-201ENST00000438452 342 ntBASIC-1.48□□□□□ -2.65
ECHDC3Q96DC8 RNU6-62P-201ENST00000516526 102 ntBASIC-1.48□□□□□ -2.65
ECHDC3Q96DC8 AC090617.8-201ENST00000623339 167 ntBASIC-1.48□□□□□ -2.65
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms