Protein–RNA interactions for Protein: Q96AJ9

VTI1A, Vesicle transport through interaction with t-SNAREs homolog 1A, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1AQ96AJ9 SNORD115-31-201ENST00000365318 82 ntBASIC1.18□□□□□ -2.22
VTI1AQ96AJ9 MIR154-201ENST00000385243 84 ntBASIC1.18□□□□□ -2.22
VTI1AQ96AJ9 AL691482.2-201ENST00000457453 84 ntBASIC1.18□□□□□ -2.22
VTI1AQ96AJ9 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.18□□□□□ -2.22
VTI1AQ96AJ9 AC114801.3-201ENST00000510231 177 ntBASIC1.18□□□□□ -2.22
VTI1AQ96AJ9 AC211469.2-201ENST00000605461 205 ntBASIC1.18□□□□□ -2.22
VTI1AQ96AJ9 SNORD114-21-201ENST00000606412 72 ntBASIC1.18□□□□□ -2.22
VTI1AQ96AJ9 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.17□□□□□ -2.22
VTI1AQ96AJ9 MIR608-201ENST00000384820 100 ntBASIC1.17□□□□□ -2.22
VTI1AQ96AJ9 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.17□□□□□ -2.22
VTI1AQ96AJ9 RNU6-871P-201ENST00000516122 100 ntBASIC1.17□□□□□ -2.22
VTI1AQ96AJ9 RNU5B-6P-201ENST00000516765 68 ntBASIC1.17□□□□□ -2.22
VTI1AQ96AJ9 RNU6-1039P-201ENST00000383931 107 ntBASIC1.16□□□□□ -2.22
VTI1AQ96AJ9 SNORA36.2-201ENST00000384004 127 ntBASIC1.16□□□□□ -2.22
VTI1AQ96AJ9 MIR4653-201ENST00000585107 83 ntBASIC1.16□□□□□ -2.22
VTI1AQ96AJ9 SNORD45.1-201ENST00000363181 77 ntBASIC1.15□□□□□ -2.23
VTI1AQ96AJ9 Y_RNA.205-201ENST00000364128 113 ntBASIC1.15□□□□□ -2.23
VTI1AQ96AJ9 RNU6-1187P-201ENST00000364771 110 ntBASIC1.15□□□□□ -2.23
VTI1AQ96AJ9 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.15□□□□□ -2.23
VTI1AQ96AJ9 RNA5SP517-201ENST00000364724 117 ntBASIC1.14□□□□□ -2.23
VTI1AQ96AJ9 RNU6-110P-201ENST00000384508 104 ntBASIC1.14□□□□□ -2.23
VTI1AQ96AJ9 RNU6-540P-201ENST00000384622 101 ntBASIC1.14□□□□□ -2.23
VTI1AQ96AJ9 MIR203A-201ENST00000384836 110 ntBASIC1.14□□□□□ -2.23
VTI1AQ96AJ9 ACA64.5-201ENST00000516207 127 ntBASIC1.14□□□□□ -2.23
VTI1AQ96AJ9 AC018659.1-201ENST00000551083 169 ntBASIC1.14□□□□□ -2.23
VTI1AQ96AJ9 MIR5000-201ENST00000577717 103 ntBASIC1.14□□□□□ -2.23
VTI1AQ96AJ9 MIR6509-201ENST00000614603 85 ntBASIC1.14□□□□□ -2.23
VTI1AQ96AJ9 AC069503.3-201ENST00000618674 145 ntBASIC1.14□□□□□ -2.23
VTI1AQ96AJ9 SNORD115-22-201ENST00000364456 82 ntBASIC1.13□□□□□ -2.23
VTI1AQ96AJ9 SNORD45A-201ENST00000384512 84 ntBASIC1.13□□□□□ -2.23
VTI1AQ96AJ9 RNU6-604P-201ENST00000390917 100 ntBASIC1.13□□□□□ -2.23
VTI1AQ96AJ9 RPL39P28-201ENST00000465655 155 ntBASIC1.13□□□□□ -2.23
VTI1AQ96AJ9 AC103810.9-201ENST00000606688 112 ntBASIC1.13□□□□□ -2.23
VTI1AQ96AJ9 MIR140-201ENST00000385282 100 ntBASIC1.12□□□□□ -2.23
VTI1AQ96AJ9 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.11□□□□□ -2.23
VTI1AQ96AJ9 MIR4752-201ENST00000579672 72 ntBASIC1.11□□□□□ -2.23
VTI1AQ96AJ9 MIR373-201ENST00000362273 69 ntBASIC1.1□□□□□ -2.23
VTI1AQ96AJ9 RNU4-38P-201ENST00000364472 129 ntBASIC1.1□□□□□ -2.23
VTI1AQ96AJ9 CYP3A137P-201ENST00000562436 69 ntBASIC1.1□□□□□ -2.23
VTI1AQ96AJ9 SNORA70.25-201ENST00000612741 95 ntBASIC1.1□□□□□ -2.23
VTI1AQ96AJ9 MIR6857-201ENST00000613267 93 ntBASIC1.1□□□□□ -2.23
VTI1AQ96AJ9 AC073869.9-201ENST00000641610 120 ntBASIC1.1□□□□□ -2.23
VTI1AQ96AJ9 SNORA40.17-201ENST00000517256 115 ntBASIC1.09□□□□□ -2.23
VTI1AQ96AJ9 MIR3973-201ENST00000579824 107 ntBASIC1.09□□□□□ -2.23
VTI1AQ96AJ9 MIR3657-201ENST00000584818 117 ntBASIC1.09□□□□□ -2.23
VTI1AQ96AJ9 SNORA25.18-201ENST00000607153 114 ntBASIC1.09□□□□□ -2.23
VTI1AQ96AJ9 RNU6-990P-201ENST00000364385 104 ntBASIC1.08□□□□□ -2.24
VTI1AQ96AJ9 RNU6-539P-201ENST00000516665 103 ntBASIC1.08□□□□□ -2.24
VTI1AQ96AJ9 MIR4698-201ENST00000577795 80 ntBASIC1.08□□□□□ -2.24
VTI1AQ96AJ9 RNU6-260P-201ENST00000384092 107 ntBASIC1.07□□□□□ -2.24
VTI1AQ96AJ9 AC006210.1-201ENST00000424882 111 ntBASIC1.07□□□□□ -2.24
VTI1AQ96AJ9 RNU1-29P-201ENST00000606574 126 ntBASIC1.07□□□□□ -2.24
VTI1AQ96AJ9 MIR8053-201ENST00000613344 75 ntBASIC1.07□□□□□ -2.24
VTI1AQ96AJ9 MIR532-201ENST00000385025 91 ntBASIC1.06□□□□□ -2.24
VTI1AQ96AJ9 MIR216A-201ENST00000385063 110 ntBASIC1.06□□□□□ -2.24
VTI1AQ96AJ9 SNORD110-201ENST00000408189 75 ntBASIC1.06□□□□□ -2.24
VTI1AQ96AJ9 AC069271.1-201ENST00000445577 156 ntBASIC1.06□□□□□ -2.24
VTI1AQ96AJ9 RNU6-881P-201ENST00000516813 102 ntBASIC1.06□□□□□ -2.24
VTI1AQ96AJ9 AC092634.7-201ENST00000621022 103 ntBASIC1.06□□□□□ -2.24
VTI1AQ96AJ9 RNU6-649P-201ENST00000384463 107 ntBASIC1.05□□□□□ -2.24
VTI1AQ96AJ9 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
VTI1AQ96AJ9 SNORD30.1-201ENST00000391309 70 ntBASIC1.05□□□□□ -2.24
VTI1AQ96AJ9 RN7SL793P-201ENST00000583259 296 ntBASIC1.05□□□□□ -2.24
VTI1AQ96AJ9 MIR548AE1-201ENST00000583292 70 ntBASIC1.05□□□□□ -2.24
VTI1AQ96AJ9 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.05□□□□□ -2.24
VTI1AQ96AJ9 SNORD113.1-201ENST00000363280 73 ntBASIC1.04□□□□□ -2.24
VTI1AQ96AJ9 RNU6-663P-201ENST00000391105 106 ntBASIC1.04□□□□□ -2.24
VTI1AQ96AJ9 MIR4473-201ENST00000583731 91 ntBASIC1.04□□□□□ -2.24
VTI1AQ96AJ9 SNORD118-201ENST00000363593 134 ntBASIC1.02□□□□□ -2.25
VTI1AQ96AJ9 RNU6-895P-201ENST00000384125 103 ntBASIC1.02□□□□□ -2.25
VTI1AQ96AJ9 PSMC1P5-201ENST00000512850 177 ntBASIC1.02□□□□□ -2.25
VTI1AQ96AJ9 RNU6-982P-201ENST00000516216 102 ntBASIC1.02□□□□□ -2.25
VTI1AQ96AJ9 RNU6-788P-201ENST00000390967 104 ntBASIC1.01□□□□□ -2.25
VTI1AQ96AJ9 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC1□□□□□ -2.25
VTI1AQ96AJ9 Y_RNA.407-201ENST00000383986 113 ntBASIC1□□□□□ -2.25
VTI1AQ96AJ9 MIR652-201ENST00000385278 98 ntBASIC1□□□□□ -2.25
VTI1AQ96AJ9 SNORA40.8-201ENST00000411034 126 ntBASIC1□□□□□ -2.25
VTI1AQ96AJ9 RNU4-54P-201ENST00000516428 129 ntBASIC1□□□□□ -2.25
VTI1AQ96AJ9 RNA5SP147-201ENST00000516493 109 ntBASIC1□□□□□ -2.25
VTI1AQ96AJ9 U6.111-201ENST00000636093 83 ntBASIC1□□□□□ -2.25
VTI1AQ96AJ9 SNORA2.1-201ENST00000363089 137 ntBASIC0.99□□□□□ -2.25
VTI1AQ96AJ9 SNORD114-4-201ENST00000363962 75 ntBASIC0.99□□□□□ -2.25
VTI1AQ96AJ9 SNORD116-24-201ENST00000384549 92 ntBASIC0.99□□□□□ -2.25
VTI1AQ96AJ9 RNU6-590P-201ENST00000365039 107 ntBASIC0.98□□□□□ -2.25
VTI1AQ96AJ9 Y_RNA.386-201ENST00000383913 105 ntBASIC0.98□□□□□ -2.25
VTI1AQ96AJ9 HMGN2P22-201ENST00000427588 175 ntBASIC0.98□□□□□ -2.25
VTI1AQ96AJ9 MIR4714-201ENST00000580728 77 ntBASIC0.97□□□□□ -2.25
VTI1AQ96AJ9 AL590095.2-201ENST00000604136 117 ntBASIC0.97□□□□□ -2.25
VTI1AQ96AJ9 RNU6-1216P-201ENST00000362590 107 ntBASIC0.96□□□□□ -2.26
VTI1AQ96AJ9 MIR518A1-201ENST00000385068 85 ntBASIC0.96□□□□□ -2.26
VTI1AQ96AJ9 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
VTI1AQ96AJ9 SCARNA17.3-201ENST00000516381 125 ntBASIC0.95□□□□□ -2.26
VTI1AQ96AJ9 MIR582-201ENST00000365731 98 ntBASIC0.94□□□□□ -2.26
VTI1AQ96AJ9 RNU6-800P-201ENST00000384473 103 ntBASIC0.94□□□□□ -2.26
VTI1AQ96AJ9 snoU13.13-201ENST00000458842 104 ntBASIC0.94□□□□□ -2.26
VTI1AQ96AJ9 RNU6-1232P-201ENST00000516299 86 ntBASIC0.94□□□□□ -2.26
VTI1AQ96AJ9 MIR5706-201ENST00000579841 80 ntBASIC0.94□□□□□ -2.26
VTI1AQ96AJ9 RNU6-630P-201ENST00000391258 106 ntBASIC0.93□□□□□ -2.26
VTI1AQ96AJ9 SNORD71-201ENST00000411292 86 ntBASIC0.93□□□□□ -2.26
VTI1AQ96AJ9 MIR6835-201ENST00000621552 64 ntBASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms