Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.3□□□□□ -2.62
PTP4A1Q93096 MTND4LP9-201ENST00000427694 174 ntBASIC-1.3□□□□□ -2.62
PTP4A1Q93096 AP000533.3-201ENST00000447704 118 ntBASIC-1.3□□□□□ -2.62
PTP4A1Q93096 MIR382-201ENST00000637119 76 ntBASIC-1.3□□□□□ -2.62
PTP4A1Q93096 RNU7-85P-201ENST00000458851 63 ntBASIC-1.31□□□□□ -2.62
PTP4A1Q93096 AC140658.3-201ENST00000567603 271 ntBASIC-1.31□□□□□ -2.62
PTP4A1Q93096 MIR5704-201ENST00000584029 77 ntBASIC-1.31□□□□□ -2.62
PTP4A1Q93096 RNU6-886P-201ENST00000384319 105 ntBASIC-1.32□□□□□ -2.62
PTP4A1Q93096 RNU6-813P-201ENST00000384691 107 ntBASIC-1.32□□□□□ -2.62
PTP4A1Q93096 RNA5SP272-201ENST00000516095 111 ntBASIC-1.32□□□□□ -2.62
PTP4A1Q93096 RNY1P9-201ENST00000532431 109 ntBASIC-1.32□□□□□ -2.62
PTP4A1Q93096 MIR378F-201ENST00000578143 78 ntBASIC-1.32□□□□□ -2.62
PTP4A1Q93096 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-1.32□□□□□ -2.62
PTP4A1Q93096 Y_RNA.649-201ENST00000459077 103 ntBASIC-1.33□□□□□ -2.62
PTP4A1Q93096 MIR4306-201ENST00000583390 91 ntBASIC-1.33□□□□□ -2.62
PTP4A1Q93096 MIR8068-201ENST00000618032 68 ntBASIC-1.33□□□□□ -2.62
PTP4A1Q93096 AL035470.1-201ENST00000622571 220 ntBASIC-1.33□□□□□ -2.62
PTP4A1Q93096 Y_RNA.95-201ENST00000363079 95 ntBASIC-1.34□□□□□ -2.62
PTP4A1Q93096 Y_RNA.630-201ENST00000411370 108 ntBASIC-1.34□□□□□ -2.62
PTP4A1Q93096 MTND5P41-201ENST00000517498 206 ntBASIC-1.34□□□□□ -2.62
PTP4A1Q93096 MIR6773-201ENST00000612812 74 ntBASIC-1.34□□□□□ -2.62
PTP4A1Q93096 RNU6-495P-201ENST00000362995 107 ntBASIC-1.35□□□□□ -2.63
PTP4A1Q93096 RNU6-24P-201ENST00000384440 107 ntBASIC-1.35□□□□□ -2.63
PTP4A1Q93096 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.35□□□□□ -2.63
PTP4A1Q93096 RNU6-30P-201ENST00000384561 107 ntBASIC-1.35□□□□□ -2.63
PTP4A1Q93096 HAR1A.1-201ENST00000459583 118 ntBASIC-1.35□□□□□ -2.63
PTP4A1Q93096 RNA5SP470-201ENST00000516463 106 ntBASIC-1.35□□□□□ -2.63
PTP4A1Q93096 MIR5009-201ENST00000578736 100 ntBASIC-1.35□□□□□ -2.63
PTP4A1Q93096 MIR3064-201ENST00000581130 66 ntBASIC-1.35□□□□□ -2.63
PTP4A1Q93096 AC104996.3-201ENST00000590718 94 ntBASIC-1.35□□□□□ -2.63
PTP4A1Q93096 RNU6-519P-201ENST00000410590 108 ntBASIC-1.36□□□□□ -2.63
PTP4A1Q93096 AC097510.1-201ENST00000510945 133 ntBASIC-1.36□□□□□ -2.63
PTP4A1Q93096 MIR548Z-201ENST00000584743 97 ntBASIC-1.36□□□□□ -2.63
PTP4A1Q93096 AC103810.7-201ENST00000607821 91 ntBASIC-1.36□□□□□ -2.63
PTP4A1Q93096 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.37□□□□□ -2.63
PTP4A1Q93096 RNU6-132P-201ENST00000383863 107 ntBASIC-1.37□□□□□ -2.63
PTP4A1Q93096 Y_RNA.491-201ENST00000384417 107 ntBASIC-1.37□□□□□ -2.63
PTP4A1Q93096 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.37□□□□□ -2.63
PTP4A1Q93096 RNU6-1211P-201ENST00000459179 105 ntBASIC-1.37□□□□□ -2.63
PTP4A1Q93096 RNU6-62P-201ENST00000516526 102 ntBASIC-1.38□□□□□ -2.63
PTP4A1Q93096 MTATP6P29-201ENST00000415057 132 ntBASIC-1.39□□□□□ -2.63
PTP4A1Q93096 RNU7-24P-201ENST00000458867 62 ntBASIC-1.39□□□□□ -2.63
PTP4A1Q93096 RNU6-905P-201ENST00000384434 107 ntBASIC-1.4□□□□□ -2.63
PTP4A1Q93096 Y_RNA.568-201ENST00000384742 113 ntBASIC-1.4□□□□□ -2.63
PTP4A1Q93096 MIRLET7B-201ENST00000385140 83 ntBASIC-1.4□□□□□ -2.63
PTP4A1Q93096 SNORD75.2-201ENST00000408784 58 ntBASIC-1.4□□□□□ -2.63
PTP4A1Q93096 RNU6-592P-201ENST00000411333 103 ntBASIC-1.4□□□□□ -2.63
PTP4A1Q93096 SNORD4B-201ENST00000459083 72 ntBASIC-1.4□□□□□ -2.63
PTP4A1Q93096 AC099654.10-201ENST00000640395 161 ntBASIC-1.4□□□□□ -2.63
PTP4A1Q93096 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.41□□□□□ -2.64
PTP4A1Q93096 SNORA62.4-201ENST00000365504 151 ntBASIC-1.41□□□□□ -2.64
PTP4A1Q93096 AC021146.9-201ENST00000512503 156 ntBASIC-1.41□□□□□ -2.64
PTP4A1Q93096 RNU7-200P-201ENST00000516105 62 ntBASIC-1.41□□□□□ -2.64
PTP4A1Q93096 MIR3140-201ENST00000583685 90 ntBASIC-1.41□□□□□ -2.64
PTP4A1Q93096 U6.95-201ENST00000636931 70 ntBASIC-1.41□□□□□ -2.64
PTP4A1Q93096 MIR3613-201ENST00000579844 87 ntBASIC-1.42□□□□□ -2.64
PTP4A1Q93096 MIR4324-201ENST00000584846 72 ntBASIC-1.42□□□□□ -2.64
PTP4A1Q93096 AC006254.2-201ENST00000603259 279 ntBASIC-1.42□□□□□ -2.64
PTP4A1Q93096 Y_RNA.96-201ENST00000363092 109 ntBASIC-1.43□□□□□ -2.64
PTP4A1Q93096 MIR548A3-201ENST00000385297 97 ntBASIC-1.43□□□□□ -2.64
PTP4A1Q93096 RNU6-257P-201ENST00000410238 98 ntBASIC-1.43□□□□□ -2.64
PTP4A1Q93096 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.43□□□□□ -2.64
PTP4A1Q93096 U6.96-201ENST00000636425 70 ntBASIC-1.43□□□□□ -2.64
PTP4A1Q93096 RNA5SP67-201ENST00000516422 131 ntBASIC-1.44□□□□□ -2.64
PTP4A1Q93096 MIR3914-2-201ENST00000637339 95 ntBASIC-1.44□□□□□ -2.64
PTP4A1Q93096 SNORD115-23-201ENST00000364461 82 ntBASIC-1.45□□□□□ -2.64
PTP4A1Q93096 Y_RNA.464-201ENST00000384282 110 ntBASIC-1.45□□□□□ -2.64
PTP4A1Q93096 Y_RNA.467-201ENST00000384297 102 ntBASIC-1.45□□□□□ -2.64
PTP4A1Q93096 MIR548A1-201ENST00000385041 97 ntBASIC-1.45□□□□□ -2.64
PTP4A1Q93096 snoU83B.1-201ENST00000517136 88 ntBASIC-1.45□□□□□ -2.64
PTP4A1Q93096 MIR6738-201ENST00000619620 64 ntBASIC-1.45□□□□□ -2.64
PTP4A1Q93096 Y_RNA.563-201ENST00000384707 108 ntBASIC-1.46□□□□□ -2.64
PTP4A1Q93096 RNU7-107P-201ENST00000459121 61 ntBASIC-1.46□□□□□ -2.64
PTP4A1Q93096 Y_RNA.712-201ENST00000517011 92 ntBASIC-1.46□□□□□ -2.64
PTP4A1Q93096 RNU5F-1-201ENST00000362507 117 ntBASIC-1.47□□□□□ -2.64
PTP4A1Q93096 SNORA24B-201ENST00000384176 131 ntBASIC-1.47□□□□□ -2.64
PTP4A1Q93096 RNU6-80P-201ENST00000384195 107 ntBASIC-1.47□□□□□ -2.64
PTP4A1Q93096 SNORD18.2-201ENST00000459604 70 ntBASIC-1.47□□□□□ -2.64
PTP4A1Q93096 RNU6-412P-201ENST00000516434 106 ntBASIC-1.47□□□□□ -2.64
PTP4A1Q93096 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.48□□□□□ -2.65
PTP4A1Q93096 RNU6-337P-201ENST00000391243 106 ntBASIC-1.48□□□□□ -2.65
PTP4A1Q93096 YWHAEP3-201ENST00000582767 121 ntBASIC-1.48□□□□□ -2.65
PTP4A1Q93096 AC138207.3-201ENST00000585289 166 ntBASIC-1.48□□□□□ -2.65
PTP4A1Q93096 RNU6-972P-201ENST00000391208 107 ntBASIC-1.49□□□□□ -2.65
PTP4A1Q93096 RNU6-479P-201ENST00000516348 105 ntBASIC-1.49□□□□□ -2.65
PTP4A1Q93096 Y_RNA.705-201ENST00000516862 110 ntBASIC-1.49□□□□□ -2.65
PTP4A1Q93096 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.49□□□□□ -2.65
PTP4A1Q93096 RNU6-971P-201ENST00000516920 106 ntBASIC-1.5□□□□□ -2.65
PTP4A1Q93096 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.5□□□□□ -2.65
PTP4A1Q93096 AC132825.6-201ENST00000638861 357 ntBASIC-1.5□□□□□ -2.65
PTP4A1Q93096 RNU6-990P-201ENST00000364385 104 ntBASIC-1.51□□□□□ -2.65
PTP4A1Q93096 SNORD114-17-201ENST00000364699 75 ntBASIC-1.51□□□□□ -2.65
PTP4A1Q93096 RNY1P5-201ENST00000383890 115 ntBASIC-1.51□□□□□ -2.65
PTP4A1Q93096 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.51□□□□□ -2.65
PTP4A1Q93096 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.51□□□□□ -2.65
PTP4A1Q93096 MIR587-201ENST00000384845 96 ntBASIC-1.51□□□□□ -2.65
PTP4A1Q93096 SNORD33.1-201ENST00000516213 88 ntBASIC-1.51□□□□□ -2.65
PTP4A1Q93096 SNORA18.5-201ENST00000516616 101 ntBASIC-1.51□□□□□ -2.65
PTP4A1Q93096 RNU6-1212P-201ENST00000517023 104 ntBASIC-1.51□□□□□ -2.65
PTP4A1Q93096 RNU6-706P-201ENST00000517229 104 ntBASIC-1.51□□□□□ -2.65
Retrieved 100 of 98,524 protein–RNA pairs in 179.2 ms