Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 uc_338.17-201ENST00000619633 179 ntBASIC0.6□□□□□ -2.31
ATP2A3Q93084 RNU6-208P-201ENST00000362431 107 ntBASIC0.59□□□□□ -2.31
ATP2A3Q93084 RNU6-54P-201ENST00000365563 107 ntBASIC0.59□□□□□ -2.31
ATP2A3Q93084 SNORD77.2-201ENST00000391045 68 ntBASIC0.59□□□□□ -2.31
ATP2A3Q93084 RNA5SP193-201ENST00000410353 107 ntBASIC0.59□□□□□ -2.31
ATP2A3Q93084 Y_RNA.685-201ENST00000516532 108 ntBASIC0.59□□□□□ -2.31
ATP2A3Q93084 SNORA70.25-201ENST00000612741 95 ntBASIC0.59□□□□□ -2.31
ATP2A3Q93084 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
ATP2A3Q93084 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.58□□□□□ -2.32
ATP2A3Q93084 MIR548O2-201ENST00000616090 70 ntBASIC0.58□□□□□ -2.32
ATP2A3Q93084 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.58□□□□□ -2.32
ATP2A3Q93084 RNU5F-1-201ENST00000362507 117 ntBASIC0.57□□□□□ -2.32
ATP2A3Q93084 RNU1-141P-201ENST00000364623 158 ntBASIC0.57□□□□□ -2.32
ATP2A3Q93084 RNU6-35P-201ENST00000384530 107 ntBASIC0.57□□□□□ -2.32
ATP2A3Q93084 SNORD71-201ENST00000411292 86 ntBASIC0.57□□□□□ -2.32
ATP2A3Q93084 AC069271.1-201ENST00000445577 156 ntBASIC0.57□□□□□ -2.32
ATP2A3Q93084 SCARNA18B-201ENST00000458806 135 ntBASIC0.57□□□□□ -2.32
ATP2A3Q93084 SNORD42B-201ENST00000458893 67 ntBASIC0.57□□□□□ -2.32
ATP2A3Q93084 RNU6-1057P-201ENST00000517162 102 ntBASIC0.57□□□□□ -2.32
ATP2A3Q93084 MIR4484-201ENST00000582855 83 ntBASIC0.57□□□□□ -2.32
ATP2A3Q93084 RNU6-315P-201ENST00000362666 107 ntBASIC0.56□□□□□ -2.32
ATP2A3Q93084 RNU6-686P-201ENST00000364839 107 ntBASIC0.56□□□□□ -2.32
ATP2A3Q93084 RNU6V-201ENST00000384105 107 ntBASIC0.56□□□□□ -2.32
ATP2A3Q93084 SNORA40.8-201ENST00000411034 126 ntBASIC0.56□□□□□ -2.32
ATP2A3Q93084 AC098934.3-201ENST00000430450 190 ntBASIC0.56□□□□□ -2.32
ATP2A3Q93084 AL157398.1-201ENST00000452981 186 ntBASIC0.56□□□□□ -2.32
ATP2A3Q93084 HAR1A.1-201ENST00000459583 118 ntBASIC0.56□□□□□ -2.32
ATP2A3Q93084 NAMPTP3-201ENST00000569273 224 ntBASIC0.56□□□□□ -2.32
ATP2A3Q93084 Y_RNA.12-201ENST00000362393 112 ntBASIC0.55□□□□□ -2.32
ATP2A3Q93084 RNU6-330P-201ENST00000363015 107 ntBASIC0.55□□□□□ -2.32
ATP2A3Q93084 SNORD118-201ENST00000363593 134 ntBASIC0.55□□□□□ -2.32
ATP2A3Q93084 Y_RNA.244-201ENST00000364484 109 ntBASIC0.55□□□□□ -2.32
ATP2A3Q93084 RNU6-382P-201ENST00000365181 106 ntBASIC0.55□□□□□ -2.32
ATP2A3Q93084 Y_RNA.371-201ENST00000365591 113 ntBASIC0.55□□□□□ -2.32
ATP2A3Q93084 RNU6-1177P-201ENST00000391058 104 ntBASIC0.55□□□□□ -2.32
ATP2A3Q93084 RNU6-229P-201ENST00000516614 102 ntBASIC0.55□□□□□ -2.32
ATP2A3Q93084 U6.81-201ENST00000612550 106 ntBASIC0.55□□□□□ -2.32
ATP2A3Q93084 DLEU2_3.2-201ENST00000612883 73 ntBASIC0.55□□□□□ -2.32
ATP2A3Q93084 MT-TY-201ENST00000387409 66 ntBASIC0.54□□□□□ -2.32
ATP2A3Q93084 MIR889-201ENST00000401280 79 ntBASIC0.54□□□□□ -2.32
ATP2A3Q93084 RNU6-1232P-201ENST00000516299 86 ntBASIC0.54□□□□□ -2.32
ATP2A3Q93084 RNU6-638P-201ENST00000516582 104 ntBASIC0.54□□□□□ -2.32
ATP2A3Q93084 RNA5SP476-201ENST00000516613 103 ntBASIC0.54□□□□□ -2.32
ATP2A3Q93084 RNU5B-6P-201ENST00000516765 68 ntBASIC0.54□□□□□ -2.32
ATP2A3Q93084 MIR6755-201ENST00000619993 66 ntBASIC0.54□□□□□ -2.32
ATP2A3Q93084 RNU6-340P-201ENST00000364005 107 ntBASIC0.53□□□□□ -2.32
ATP2A3Q93084 U3.27-201ENST00000391237 200 ntBASIC0.53□□□□□ -2.32
ATP2A3Q93084 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.53□□□□□ -2.32
ATP2A3Q93084 SNORA62.5-201ENST00000516634 120 ntBASIC0.53□□□□□ -2.32
ATP2A3Q93084 MIR548AE1-201ENST00000583292 70 ntBASIC0.53□□□□□ -2.32
ATP2A3Q93084 MIR664A-201ENST00000626086 82 ntBASIC0.53□□□□□ -2.32
ATP2A3Q93084 RNY4P3-201ENST00000365254 95 ntBASIC0.52□□□□□ -2.33
ATP2A3Q93084 RNU6-154P-201ENST00000384306 106 ntBASIC0.52□□□□□ -2.33
ATP2A3Q93084 MIR518A1-201ENST00000385068 85 ntBASIC0.52□□□□□ -2.33
ATP2A3Q93084 AC074348.1-201ENST00000426503 132 ntBASIC0.52□□□□□ -2.33
ATP2A3Q93084 AC097510.1-201ENST00000510945 133 ntBASIC0.52□□□□□ -2.33
ATP2A3Q93084 Y_RNA.660-201ENST00000516002 120 ntBASIC0.52□□□□□ -2.33
ATP2A3Q93084 MIR4460-201ENST00000577862 86 ntBASIC0.52□□□□□ -2.33
ATP2A3Q93084 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.52□□□□□ -2.33
ATP2A3Q93084 RNU6-495P-201ENST00000362995 107 ntBASIC0.51□□□□□ -2.33
ATP2A3Q93084 RNU6-24P-201ENST00000384440 107 ntBASIC0.51□□□□□ -2.33
ATP2A3Q93084 Y_RNA.606-201ENST00000410579 103 ntBASIC0.51□□□□□ -2.33
ATP2A3Q93084 AC114737.2-201ENST00000421583 173 ntBASIC0.51□□□□□ -2.33
ATP2A3Q93084 RNU7-74P-201ENST00000459104 62 ntBASIC0.51□□□□□ -2.33
ATP2A3Q93084 SNORA40.17-201ENST00000517256 115 ntBASIC0.51□□□□□ -2.33
ATP2A3Q93084 MIR4773-1-201ENST00000637203 78 ntBASIC0.51□□□□□ -2.33
ATP2A3Q93084 RNU2-59P-201ENST00000410482 191 ntBASIC0.5□□□□□ -2.33
ATP2A3Q93084 HMGN2P22-201ENST00000427588 175 ntBASIC0.5□□□□□ -2.33
ATP2A3Q93084 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.5□□□□□ -2.33
ATP2A3Q93084 SNORA68.3-201ENST00000515906 83 ntBASIC0.5□□□□□ -2.33
ATP2A3Q93084 MIR3134-201ENST00000579433 74 ntBASIC0.5□□□□□ -2.33
ATP2A3Q93084 YWHAEP2-201ENST00000580066 112 ntBASIC0.5□□□□□ -2.33
ATP2A3Q93084 YWHAEP3-201ENST00000582767 121 ntBASIC0.5□□□□□ -2.33
ATP2A3Q93084 MIR4473-201ENST00000583731 91 ntBASIC0.5□□□□□ -2.33
ATP2A3Q93084 AC243829.6-201ENST00000612652 106 ntBASIC0.5□□□□□ -2.33
ATP2A3Q93084 Y_RNA.264-201ENST00000364665 102 ntBASIC0.49□□□□□ -2.33
ATP2A3Q93084 SNORD75.2-201ENST00000408784 58 ntBASIC0.49□□□□□ -2.33
ATP2A3Q93084 AC006210.1-201ENST00000424882 111 ntBASIC0.49□□□□□ -2.33
ATP2A3Q93084 RNU6-303P-201ENST00000517091 106 ntBASIC0.49□□□□□ -2.33
ATP2A3Q93084 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC0.49□□□□□ -2.33
ATP2A3Q93084 RNU6-990P-201ENST00000364385 104 ntBASIC0.48□□□□□ -2.33
ATP2A3Q93084 Y_RNA.423-201ENST00000384057 113 ntBASIC0.48□□□□□ -2.33
ATP2A3Q93084 SNORD110-201ENST00000408189 75 ntBASIC0.48□□□□□ -2.33
ATP2A3Q93084 AC069503.3-201ENST00000618674 145 ntBASIC0.48□□□□□ -2.33
ATP2A3Q93084 AC073869.9-201ENST00000641610 120 ntBASIC0.48□□□□□ -2.33
ATP2A3Q93084 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.48□□□□□ -2.33
ATP2A3Q93084 MIR103A1-201ENST00000362165 78 ntBASIC0.47□□□□□ -2.33
ATP2A3Q93084 RNU6-1094P-201ENST00000362416 104 ntBASIC0.47□□□□□ -2.33
ATP2A3Q93084 RNA5SP285-201ENST00000516619 119 ntBASIC0.47□□□□□ -2.33
ATP2A3Q93084 MIR6086-201ENST00000638065 55 ntBASIC0.47□□□□□ -2.33
ATP2A3Q93084 VTRNA1-3-201ENST00000365645 89 ntBASIC0.46□□□□□ -2.34
ATP2A3Q93084 SNORA8.1-201ENST00000384250 140 ntBASIC0.46□□□□□ -2.34
ATP2A3Q93084 MIR203A-201ENST00000384836 110 ntBASIC0.46□□□□□ -2.34
ATP2A3Q93084 RNU7-24P-201ENST00000458867 62 ntBASIC0.46□□□□□ -2.34
ATP2A3Q93084 RNU6-523P-201ENST00000516304 54 ntBASIC0.46□□□□□ -2.34
ATP2A3Q93084 AC145423.2-201ENST00000610631 239 ntBASIC0.46□□□□□ -2.34
ATP2A3Q93084 SNORD44.1-201ENST00000363202 61 ntBASIC0.45□□□□□ -2.34
ATP2A3Q93084 SNORA50A-201ENST00000384225 134 ntBASIC0.45□□□□□ -2.34
ATP2A3Q93084 MIR216B-201ENST00000390186 82 ntBASIC0.45□□□□□ -2.34
ATP2A3Q93084 MIR501-201ENST00000390204 84 ntBASIC0.45□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 166 ms