Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 RNA5SP404-201ENST00000517118 132 ntBASIC1.2□□□□□ -2.22
SH3RF3Q8TEJ3 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.19□□□□□ -2.22
SH3RF3Q8TEJ3 RNU6-1079P-201ENST00000362861 110 ntBASIC1.19□□□□□ -2.22
SH3RF3Q8TEJ3 RNU1-124P-201ENST00000363861 145 ntBASIC1.19□□□□□ -2.22
SH3RF3Q8TEJ3 RNU6-645P-201ENST00000364649 106 ntBASIC1.19□□□□□ -2.22
SH3RF3Q8TEJ3 RNU6-614P-201ENST00000384369 107 ntBASIC1.19□□□□□ -2.22
SH3RF3Q8TEJ3 MIR644A-201ENST00000385262 94 ntBASIC1.19□□□□□ -2.22
SH3RF3Q8TEJ3 SNORD12-201ENST00000391002 90 ntBASIC1.19□□□□□ -2.22
SH3RF3Q8TEJ3 RNU6-656P-201ENST00000516785 107 ntBASIC1.19□□□□□ -2.22
SH3RF3Q8TEJ3 AL136317.1-201ENST00000612653 226 ntBASIC1.19□□□□□ -2.22
SH3RF3Q8TEJ3 U6.59-201ENST00000615686 107 ntBASIC1.19□□□□□ -2.22
SH3RF3Q8TEJ3 RNU6-668P-201ENST00000364180 107 ntBASIC1.18□□□□□ -2.22
SH3RF3Q8TEJ3 RNU6-990P-201ENST00000364385 104 ntBASIC1.18□□□□□ -2.22
SH3RF3Q8TEJ3 RNA5SP192-201ENST00000364404 120 ntBASIC1.18□□□□□ -2.22
SH3RF3Q8TEJ3 MIR216B-201ENST00000390186 82 ntBASIC1.18□□□□□ -2.22
SH3RF3Q8TEJ3 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
SH3RF3Q8TEJ3 SNORD41.1-201ENST00000391000 69 ntBASIC1.18□□□□□ -2.22
SH3RF3Q8TEJ3 AC002350.1-201ENST00000490759 375 ntBASIC1.18□□□□□ -2.22
SH3RF3Q8TEJ3 RNU6-542P-201ENST00000516405 103 ntBASIC1.18□□□□□ -2.22
SH3RF3Q8TEJ3 RN7SL793P-201ENST00000583259 296 ntBASIC1.18□□□□□ -2.22
SH3RF3Q8TEJ3 SNORA25.5-201ENST00000363782 126 ntBASIC1.17□□□□□ -2.22
SH3RF3Q8TEJ3 RNU6-260P-201ENST00000384092 107 ntBASIC1.17□□□□□ -2.22
SH3RF3Q8TEJ3 RNU6V-201ENST00000384105 107 ntBASIC1.17□□□□□ -2.22
SH3RF3Q8TEJ3 AC002429.1-201ENST00000437672 148 ntBASIC1.17□□□□□ -2.22
SH3RF3Q8TEJ3 MTND4LP1-201ENST00000446263 157 ntBASIC1.17□□□□□ -2.22
SH3RF3Q8TEJ3 SCARNA21.1-201ENST00000515996 128 ntBASIC1.17□□□□□ -2.22
SH3RF3Q8TEJ3 MIR3973-201ENST00000579824 107 ntBASIC1.17□□□□□ -2.22
SH3RF3Q8TEJ3 SNORD113-4-201ENST00000364802 75 ntBASIC1.16□□□□□ -2.22
SH3RF3Q8TEJ3 SNORD28-201ENST00000384706 75 ntBASIC1.16□□□□□ -2.22
SH3RF3Q8TEJ3 AC067863.3-201ENST00000624172 122 ntBASIC1.16□□□□□ -2.22
SH3RF3Q8TEJ3 MT-TY-201ENST00000387409 66 ntBASIC1.15□□□□□ -2.23
SH3RF3Q8TEJ3 MIR466-201ENST00000580653 84 ntBASIC1.15□□□□□ -2.23
SH3RF3Q8TEJ3 AC244669.1-204ENST00000621564 178 ntBASIC1.15□□□□□ -2.23
SH3RF3Q8TEJ3 MIR6739-201ENST00000622461 75 ntBASIC1.15□□□□□ -2.23
SH3RF3Q8TEJ3 SNORA2.1-201ENST00000363089 137 ntBASIC1.14□□□□□ -2.23
SH3RF3Q8TEJ3 MIR216A-201ENST00000385063 110 ntBASIC1.14□□□□□ -2.23
SH3RF3Q8TEJ3 RNA5SP299-201ENST00000391203 116 ntBASIC1.14□□□□□ -2.23
SH3RF3Q8TEJ3 MIR4639-201ENST00000584938 69 ntBASIC1.14□□□□□ -2.23
SH3RF3Q8TEJ3 RNU6-726P-201ENST00000364680 107 ntBASIC1.13□□□□□ -2.23
SH3RF3Q8TEJ3 MIR19B1-201ENST00000384829 87 ntBASIC1.13□□□□□ -2.23
SH3RF3Q8TEJ3 MIR532-201ENST00000385025 91 ntBASIC1.13□□□□□ -2.23
SH3RF3Q8TEJ3 SNORA75.1-201ENST00000391130 148 ntBASIC1.13□□□□□ -2.23
SH3RF3Q8TEJ3 RNA5SP436-201ENST00000516020 115 ntBASIC1.13□□□□□ -2.23
SH3RF3Q8TEJ3 Y_RNA.68-201ENST00000362881 102 ntBASIC1.12□□□□□ -2.23
SH3RF3Q8TEJ3 SNORD18A-201ENST00000363753 72 ntBASIC1.12□□□□□ -2.23
SH3RF3Q8TEJ3 RNA5SP147-201ENST00000516493 109 ntBASIC1.12□□□□□ -2.23
SH3RF3Q8TEJ3 RNA5SP47-201ENST00000517230 109 ntBASIC1.12□□□□□ -2.23
SH3RF3Q8TEJ3 MIR7978-201ENST00000636158 59 ntBASIC1.12□□□□□ -2.23
SH3RF3Q8TEJ3 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.11□□□□□ -2.23
SH3RF3Q8TEJ3 RNU6-1089P-201ENST00000516473 104 ntBASIC1.11□□□□□ -2.23
SH3RF3Q8TEJ3 MIR4698-201ENST00000577795 80 ntBASIC1.11□□□□□ -2.23
SH3RF3Q8TEJ3 RNU1-141P-201ENST00000364623 158 ntBASIC1.1□□□□□ -2.23
SH3RF3Q8TEJ3 OR2A41P-201ENST00000473586 105 ntBASIC1.1□□□□□ -2.23
SH3RF3Q8TEJ3 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.1□□□□□ -2.23
SH3RF3Q8TEJ3 RNU6-122P-201ENST00000516818 107 ntBASIC1.1□□□□□ -2.23
SH3RF3Q8TEJ3 AC018659.1-201ENST00000551083 169 ntBASIC1.1□□□□□ -2.23
SH3RF3Q8TEJ3 MIR4661-201ENST00000582720 75 ntBASIC1.1□□□□□ -2.23
SH3RF3Q8TEJ3 AC211469.2-201ENST00000605461 205 ntBASIC1.1□□□□□ -2.23
SH3RF3Q8TEJ3 RNU6-940P-201ENST00000363433 104 ntBASIC1.09□□□□□ -2.23
SH3RF3Q8TEJ3 RNA5SP215-201ENST00000363440 122 ntBASIC1.09□□□□□ -2.23
SH3RF3Q8TEJ3 RNA5SP117-201ENST00000365294 118 ntBASIC1.09□□□□□ -2.23
SH3RF3Q8TEJ3 MIR200A-201ENST00000384875 90 ntBASIC1.09□□□□□ -2.23
SH3RF3Q8TEJ3 RNU6-269P-201ENST00000391077 97 ntBASIC1.09□□□□□ -2.23
SH3RF3Q8TEJ3 RNU6-1110P-201ENST00000516462 101 ntBASIC1.09□□□□□ -2.23
SH3RF3Q8TEJ3 RNU6-135P-201ENST00000516769 101 ntBASIC1.09□□□□□ -2.23
SH3RF3Q8TEJ3 SNORD60.1-201ENST00000362451 73 ntBASIC1.08□□□□□ -2.24
SH3RF3Q8TEJ3 SNORD89-201ENST00000390981 114 ntBASIC1.08□□□□□ -2.24
SH3RF3Q8TEJ3 AL157398.1-201ENST00000452981 186 ntBASIC1.08□□□□□ -2.24
SH3RF3Q8TEJ3 RNU7-74P-201ENST00000459104 62 ntBASIC1.08□□□□□ -2.24
SH3RF3Q8TEJ3 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.07□□□□□ -2.24
SH3RF3Q8TEJ3 SNORD114-24-201ENST00000365029 72 ntBASIC1.07□□□□□ -2.24
SH3RF3Q8TEJ3 SNORD105-201ENST00000386910 85 ntBASIC1.07□□□□□ -2.24
SH3RF3Q8TEJ3 Y_RNA.633-201ENST00000459107 95 ntBASIC1.07□□□□□ -2.24
SH3RF3Q8TEJ3 RNU5B-6P-201ENST00000516765 68 ntBASIC1.07□□□□□ -2.24
SH3RF3Q8TEJ3 MIR4460-201ENST00000577862 86 ntBASIC1.07□□□□□ -2.24
SH3RF3Q8TEJ3 MIR3678-201ENST00000578455 94 ntBASIC1.07□□□□□ -2.24
SH3RF3Q8TEJ3 MIR3938-201ENST00000582157 103 ntBASIC1.07□□□□□ -2.24
SH3RF3Q8TEJ3 MIR6857-201ENST00000613267 93 ntBASIC1.07□□□□□ -2.24
SH3RF3Q8TEJ3 RNU6-1335P-201ENST00000365426 107 ntBASIC1.06□□□□□ -2.24
SH3RF3Q8TEJ3 snoU13.13-201ENST00000458842 104 ntBASIC1.06□□□□□ -2.24
SH3RF3Q8TEJ3 RNA5SP484-201ENST00000458857 111 ntBASIC1.06□□□□□ -2.24
SH3RF3Q8TEJ3 MIR5000-201ENST00000577717 103 ntBASIC1.06□□□□□ -2.24
SH3RF3Q8TEJ3 RNU6-92P-201ENST00000605893 104 ntBASIC1.06□□□□□ -2.24
SH3RF3Q8TEJ3 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
SH3RF3Q8TEJ3 RNU6-716P-201ENST00000365621 103 ntBASIC1.05□□□□□ -2.24
SH3RF3Q8TEJ3 SNORA8.2-201ENST00000384372 139 ntBASIC1.05□□□□□ -2.24
SH3RF3Q8TEJ3 MIR193B-201ENST00000384907 83 ntBASIC1.05□□□□□ -2.24
SH3RF3Q8TEJ3 MIR573-201ENST00000384964 99 ntBASIC1.05□□□□□ -2.24
SH3RF3Q8TEJ3 U7.7-201ENST00000459276 60 ntBASIC1.05□□□□□ -2.24
SH3RF3Q8TEJ3 U2.7-201ENST00000619197 100 ntBASIC1.05□□□□□ -2.24
SH3RF3Q8TEJ3 MIR6828-201ENST00000636181 60 ntBASIC1.05□□□□□ -2.24
SH3RF3Q8TEJ3 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
SH3RF3Q8TEJ3 RNA5SP457-201ENST00000363657 124 ntBASIC1.04□□□□□ -2.24
SH3RF3Q8TEJ3 Y_RNA.433-201ENST00000384089 102 ntBASIC1.04□□□□□ -2.24
SH3RF3Q8TEJ3 MIR521-2-201ENST00000384818 87 ntBASIC1.04□□□□□ -2.24
SH3RF3Q8TEJ3 RNU7-174P-201ENST00000516248 59 ntBASIC1.04□□□□□ -2.24
SH3RF3Q8TEJ3 MIR3612-201ENST00000579753 87 ntBASIC1.04□□□□□ -2.24
SH3RF3Q8TEJ3 U4.4-201ENST00000620626 117 ntBASIC1.04□□□□□ -2.24
SH3RF3Q8TEJ3 AL162376.1-201ENST00000624117 175 ntBASIC1.04□□□□□ -2.24
SH3RF3Q8TEJ3 Y_RNA.250-201ENST00000364542 110 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 1176.7 ms