Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 RNU6-242P-201ENST00000384359 107 ntBASIC0.36□□□□□ -2.35
CCHCR1Q8TD31 SNORA26.2-201ENST00000390922 122 ntBASIC0.36□□□□□ -2.35
CCHCR1Q8TD31 RNA5SP193-201ENST00000410353 107 ntBASIC0.36□□□□□ -2.35
CCHCR1Q8TD31 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC0.36□□□□□ -2.35
CCHCR1Q8TD31 RNU7-24P-201ENST00000458867 62 ntBASIC0.36□□□□□ -2.35
CCHCR1Q8TD31 Y_RNA.660-201ENST00000516002 120 ntBASIC0.36□□□□□ -2.35
CCHCR1Q8TD31 MIR4677-201ENST00000584153 80 ntBASIC0.36□□□□□ -2.35
CCHCR1Q8TD31 RNU6-208P-201ENST00000362431 107 ntBASIC0.35□□□□□ -2.35
CCHCR1Q8TD31 Y_RNA.264-201ENST00000364665 102 ntBASIC0.35□□□□□ -2.35
CCHCR1Q8TD31 RNU6-1276P-201ENST00000365372 104 ntBASIC0.35□□□□□ -2.35
CCHCR1Q8TD31 VTRNA1-3-201ENST00000365645 89 ntBASIC0.35□□□□□ -2.35
CCHCR1Q8TD31 Y_RNA.407-201ENST00000383986 113 ntBASIC0.35□□□□□ -2.35
CCHCR1Q8TD31 RNU6-592P-201ENST00000411333 103 ntBASIC0.35□□□□□ -2.35
CCHCR1Q8TD31 AC073261.1-201ENST00000429409 121 ntBASIC0.35□□□□□ -2.35
CCHCR1Q8TD31 AL450471.1-201ENST00000447509 127 ntBASIC0.35□□□□□ -2.35
CCHCR1Q8TD31 MIR4473-201ENST00000583731 91 ntBASIC0.35□□□□□ -2.35
CCHCR1Q8TD31 SNORD114-23-201ENST00000363536 72 ntBASIC0.34□□□□□ -2.36
CCHCR1Q8TD31 RNU6-824P-201ENST00000363724 104 ntBASIC0.34□□□□□ -2.36
CCHCR1Q8TD31 Y_RNA.258-201ENST00000364613 105 ntBASIC0.34□□□□□ -2.36
CCHCR1Q8TD31 MIR548AE1-201ENST00000583292 70 ntBASIC0.34□□□□□ -2.36
CCHCR1Q8TD31 U6.81-201ENST00000612550 106 ntBASIC0.34□□□□□ -2.36
CCHCR1Q8TD31 Y_RNA.388-201ENST00000383919 113 ntBASIC0.33□□□□□ -2.36
CCHCR1Q8TD31 SNORD75.2-201ENST00000408784 58 ntBASIC0.33□□□□□ -2.36
CCHCR1Q8TD31 Y_RNA.606-201ENST00000410579 103 ntBASIC0.33□□□□□ -2.36
CCHCR1Q8TD31 SNORD42B-201ENST00000458893 67 ntBASIC0.33□□□□□ -2.36
CCHCR1Q8TD31 RNA5SP134-201ENST00000516492 96 ntBASIC0.33□□□□□ -2.36
CCHCR1Q8TD31 RN7SL793P-201ENST00000583259 296 ntBASIC0.33□□□□□ -2.36
CCHCR1Q8TD31 MIR7111-201ENST00000619751 72 ntBASIC0.33□□□□□ -2.36
CCHCR1Q8TD31 PVT1_3.1-201ENST00000620853 95 ntBASIC0.33□□□□□ -2.36
CCHCR1Q8TD31 uc_338.10-201ENST00000621872 182 ntBASIC0.33□□□□□ -2.36
CCHCR1Q8TD31 MIR499B-201ENST00000636498 73 ntBASIC0.33□□□□□ -2.36
CCHCR1Q8TD31 RNU6-161P-201ENST00000363051 106 ntBASIC0.32□□□□□ -2.36
CCHCR1Q8TD31 RNU6-129P-201ENST00000391022 107 ntBASIC0.32□□□□□ -2.36
CCHCR1Q8TD31 RNU6-1108P-201ENST00000516308 104 ntBASIC0.32□□□□□ -2.36
CCHCR1Q8TD31 MIR4666B-201ENST00000578142 81 ntBASIC0.32□□□□□ -2.36
CCHCR1Q8TD31 AC010487.4-201ENST00000637027 61 ntBASIC0.32□□□□□ -2.36
CCHCR1Q8TD31 Y_RNA.36-201ENST00000362602 112 ntBASIC0.31□□□□□ -2.36
CCHCR1Q8TD31 RNU6-478P-201ENST00000363904 110 ntBASIC0.31□□□□□ -2.36
CCHCR1Q8TD31 Y_RNA.316-201ENST00000365118 111 ntBASIC0.31□□□□□ -2.36
CCHCR1Q8TD31 RNU7-129P-201ENST00000516128 62 ntBASIC0.31□□□□□ -2.36
CCHCR1Q8TD31 MIR4315-1-201ENST00000636800 73 ntBASIC0.31□□□□□ -2.36
CCHCR1Q8TD31 MIR4315-2-201ENST00000640925 73 ntBASIC0.31□□□□□ -2.36
CCHCR1Q8TD31 SNORD114-4-201ENST00000363962 75 ntBASIC0.3□□□□□ -2.36
CCHCR1Q8TD31 RNU6-382P-201ENST00000365181 106 ntBASIC0.3□□□□□ -2.36
CCHCR1Q8TD31 RNU6-127P-201ENST00000390897 107 ntBASIC0.3□□□□□ -2.36
CCHCR1Q8TD31 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
CCHCR1Q8TD31 RNU6-686P-201ENST00000364839 107 ntBASIC0.29□□□□□ -2.36
CCHCR1Q8TD31 MIR652-201ENST00000385278 98 ntBASIC0.29□□□□□ -2.36
CCHCR1Q8TD31 RNU6-782P-201ENST00000516852 104 ntBASIC0.29□□□□□ -2.36
CCHCR1Q8TD31 YWHAEP3-201ENST00000582767 121 ntBASIC0.29□□□□□ -2.36
CCHCR1Q8TD31 MIRLET7A1-201ENST00000362295 80 ntBASIC0.28□□□□□ -2.36
CCHCR1Q8TD31 RNU6-315P-201ENST00000362666 107 ntBASIC0.28□□□□□ -2.36
CCHCR1Q8TD31 RNU6-340P-201ENST00000364005 107 ntBASIC0.28□□□□□ -2.36
CCHCR1Q8TD31 RNU6-787P-201ENST00000384032 107 ntBASIC0.28□□□□□ -2.36
CCHCR1Q8TD31 MIR516B1-201ENST00000385211 90 ntBASIC0.28□□□□□ -2.36
CCHCR1Q8TD31 MIR3925-201ENST00000584674 77 ntBASIC0.28□□□□□ -2.36
CCHCR1Q8TD31 Y_RNA.12-201ENST00000362393 112 ntBASIC0.27□□□□□ -2.37
CCHCR1Q8TD31 RNA5SP173-201ENST00000364857 136 ntBASIC0.27□□□□□ -2.37
CCHCR1Q8TD31 RNU6-652P-201ENST00000365488 107 ntBASIC0.27□□□□□ -2.37
CCHCR1Q8TD31 RNU6-154P-201ENST00000384306 106 ntBASIC0.27□□□□□ -2.37
CCHCR1Q8TD31 MIR876-201ENST00000401147 81 ntBASIC0.27□□□□□ -2.37
CCHCR1Q8TD31 SCARNA17.3-201ENST00000516381 125 ntBASIC0.27□□□□□ -2.37
CCHCR1Q8TD31 MIR1245B-201ENST00000636115 69 ntBASIC0.27□□□□□ -2.37
CCHCR1Q8TD31 MIR193B-201ENST00000384907 83 ntBASIC0.26□□□□□ -2.37
CCHCR1Q8TD31 MIR4773-1-201ENST00000637203 78 ntBASIC0.26□□□□□ -2.37
CCHCR1Q8TD31 SNORD114-26-201ENST00000363543 72 ntBASIC0.25□□□□□ -2.37
CCHCR1Q8TD31 RNU6-681P-201ENST00000364012 104 ntBASIC0.25□□□□□ -2.37
CCHCR1Q8TD31 Y_RNA.371-201ENST00000365591 113 ntBASIC0.25□□□□□ -2.37
CCHCR1Q8TD31 RNA5SP480-201ENST00000516840 109 ntBASIC0.25□□□□□ -2.37
CCHCR1Q8TD31 MIR5093-201ENST00000583199 100 ntBASIC0.25□□□□□ -2.37
CCHCR1Q8TD31 AC084368.1-201ENST00000620935 65 ntBASIC0.25□□□□□ -2.37
CCHCR1Q8TD31 SNORA42.1-201ENST00000363515 137 ntBASIC0.24□□□□□ -2.37
CCHCR1Q8TD31 RNU6-573P-201ENST00000383938 106 ntBASIC0.24□□□□□ -2.37
CCHCR1Q8TD31 RNU6-274P-201ENST00000459566 107 ntBASIC0.24□□□□□ -2.37
CCHCR1Q8TD31 SNORD114-29-201ENST00000364819 70 ntBASIC0.23□□□□□ -2.37
CCHCR1Q8TD31 Y_RNA.540-201ENST00000384638 111 ntBASIC0.23□□□□□ -2.37
CCHCR1Q8TD31 SNORA75.1-201ENST00000391130 148 ntBASIC0.23□□□□□ -2.37
CCHCR1Q8TD31 MIR548H2-201ENST00000408874 88 ntBASIC0.23□□□□□ -2.37
CCHCR1Q8TD31 RNU6-303P-201ENST00000517091 106 ntBASIC0.23□□□□□ -2.37
CCHCR1Q8TD31 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC0.23□□□□□ -2.37
CCHCR1Q8TD31 DLEU2_3.2-201ENST00000612883 73 ntBASIC0.23□□□□□ -2.37
CCHCR1Q8TD31 MIR20A-201ENST00000362279 71 ntBASIC0.22□□□□□ -2.37
CCHCR1Q8TD31 RNU6-1039P-201ENST00000383931 107 ntBASIC0.22□□□□□ -2.37
CCHCR1Q8TD31 AC244090.1-201ENST00000441884 93 ntBASIC0.22□□□□□ -2.37
CCHCR1Q8TD31 RNU6-752P-201ENST00000516376 102 ntBASIC0.22□□□□□ -2.37
CCHCR1Q8TD31 RNU7-188P-201ENST00000517063 64 ntBASIC0.22□□□□□ -2.37
CCHCR1Q8TD31 SCARNA11.2-201ENST00000517183 154 ntBASIC0.22□□□□□ -2.37
CCHCR1Q8TD31 MIR4712-201ENST00000583750 82 ntBASIC0.22□□□□□ -2.37
CCHCR1Q8TD31 MIR3202-2-201ENST00000635980 79 ntBASIC0.22□□□□□ -2.37
CCHCR1Q8TD31 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.22□□□□□ -2.37
CCHCR1Q8TD31 Y_RNA.219-201ENST00000364232 113 ntBASIC0.21□□□□□ -2.38
CCHCR1Q8TD31 Y_RNA.313-201ENST00000365095 103 ntBASIC0.21□□□□□ -2.38
CCHCR1Q8TD31 AC074348.1-201ENST00000426503 132 ntBASIC0.21□□□□□ -2.38
CCHCR1Q8TD31 SNORA62.5-201ENST00000516634 120 ntBASIC0.21□□□□□ -2.38
CCHCR1Q8TD31 MIR1273G-201ENST00000577677 100 ntBASIC0.21□□□□□ -2.38
CCHCR1Q8TD31 Y_RNA.94-201ENST00000363068 106 ntBASIC0.2□□□□□ -2.38
CCHCR1Q8TD31 MIR643-201ENST00000385267 97 ntBASIC0.2□□□□□ -2.38
CCHCR1Q8TD31 RNU6-380P-201ENST00000410207 107 ntBASIC0.2□□□□□ -2.38
CCHCR1Q8TD31 MIR4743-201ENST00000584576 69 ntBASIC0.2□□□□□ -2.38
CCHCR1Q8TD31 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.2□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 198.8 ms