Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 RNU6-208P-201ENST00000362431 107 ntBASIC0.33□□□□□ -2.36
CLIP4Q8N3C7 RNA5SP173-201ENST00000364857 136 ntBASIC0.33□□□□□ -2.36
CLIP4Q8N3C7 SNORA50A-201ENST00000384225 134 ntBASIC0.33□□□□□ -2.36
CLIP4Q8N3C7 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.33□□□□□ -2.36
CLIP4Q8N3C7 HMGN2P22-201ENST00000427588 175 ntBASIC0.33□□□□□ -2.36
CLIP4Q8N3C7 AC097510.1-201ENST00000510945 133 ntBASIC0.33□□□□□ -2.36
CLIP4Q8N3C7 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.33□□□□□ -2.36
CLIP4Q8N3C7 RNA5SP128-201ENST00000365305 116 ntBASIC0.32□□□□□ -2.36
CLIP4Q8N3C7 RNU6-573P-201ENST00000383938 106 ntBASIC0.32□□□□□ -2.36
CLIP4Q8N3C7 Y_RNA.437-201ENST00000384113 113 ntBASIC0.32□□□□□ -2.36
CLIP4Q8N3C7 RNU7-129P-201ENST00000516128 62 ntBASIC0.32□□□□□ -2.36
CLIP4Q8N3C7 AC243829.6-201ENST00000612652 106 ntBASIC0.32□□□□□ -2.36
CLIP4Q8N3C7 MIR6779-201ENST00000617283 64 ntBASIC0.32□□□□□ -2.36
CLIP4Q8N3C7 AC090625.1-201ENST00000357130 210 ntBASIC0.31□□□□□ -2.36
CLIP4Q8N3C7 Y_RNA.125-201ENST00000363371 111 ntBASIC0.31□□□□□ -2.36
CLIP4Q8N3C7 RNA5SP62-201ENST00000363457 110 ntBASIC0.31□□□□□ -2.36
CLIP4Q8N3C7 Y_RNA.264-201ENST00000364665 102 ntBASIC0.31□□□□□ -2.36
CLIP4Q8N3C7 RNU6-652P-201ENST00000365488 107 ntBASIC0.31□□□□□ -2.36
CLIP4Q8N3C7 RNU6-815P-201ENST00000384080 113 ntBASIC0.31□□□□□ -2.36
CLIP4Q8N3C7 MIR193B-201ENST00000384907 83 ntBASIC0.31□□□□□ -2.36
CLIP4Q8N3C7 RNU6-129P-201ENST00000391022 107 ntBASIC0.31□□□□□ -2.36
CLIP4Q8N3C7 AC073261.1-201ENST00000429409 121 ntBASIC0.31□□□□□ -2.36
CLIP4Q8N3C7 uc_338.10-201ENST00000621872 182 ntBASIC0.31□□□□□ -2.36
CLIP4Q8N3C7 MIR499B-201ENST00000636498 73 ntBASIC0.31□□□□□ -2.36
CLIP4Q8N3C7 AC010487.4-201ENST00000637027 61 ntBASIC0.31□□□□□ -2.36
CLIP4Q8N3C7 RNU6-495P-201ENST00000362995 107 ntBASIC0.3□□□□□ -2.36
CLIP4Q8N3C7 RNU6-824P-201ENST00000363724 104 ntBASIC0.3□□□□□ -2.36
CLIP4Q8N3C7 Y_RNA.205-201ENST00000364128 113 ntBASIC0.3□□□□□ -2.36
CLIP4Q8N3C7 Y_RNA.316-201ENST00000365118 111 ntBASIC0.3□□□□□ -2.36
CLIP4Q8N3C7 Y_RNA.371-201ENST00000365591 113 ntBASIC0.3□□□□□ -2.36
CLIP4Q8N3C7 VTRNA1-3-201ENST00000365645 89 ntBASIC0.3□□□□□ -2.36
CLIP4Q8N3C7 Y_RNA.407-201ENST00000383986 113 ntBASIC0.3□□□□□ -2.36
CLIP4Q8N3C7 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC0.3□□□□□ -2.36
CLIP4Q8N3C7 Y_RNA.660-201ENST00000516002 120 ntBASIC0.3□□□□□ -2.36
CLIP4Q8N3C7 RNU6-557P-201ENST00000516842 110 ntBASIC0.3□□□□□ -2.36
CLIP4Q8N3C7 SNORA9.1-201ENST00000362412 131 ntBASIC0.29□□□□□ -2.36
CLIP4Q8N3C7 RNU6-478P-201ENST00000363904 110 ntBASIC0.29□□□□□ -2.36
CLIP4Q8N3C7 Y_RNA.258-201ENST00000364613 105 ntBASIC0.29□□□□□ -2.36
CLIP4Q8N3C7 MIR501-201ENST00000390204 84 ntBASIC0.29□□□□□ -2.36
CLIP4Q8N3C7 SNORD42B-201ENST00000458893 67 ntBASIC0.29□□□□□ -2.36
CLIP4Q8N3C7 AC108740.1-201ENST00000498629 225 ntBASIC0.29□□□□□ -2.36
CLIP4Q8N3C7 MIR4666B-201ENST00000578142 81 ntBASIC0.29□□□□□ -2.36
CLIP4Q8N3C7 MIR548AE1-201ENST00000583292 70 ntBASIC0.29□□□□□ -2.36
CLIP4Q8N3C7 MIR4773-1-201ENST00000637203 78 ntBASIC0.29□□□□□ -2.36
CLIP4Q8N3C7 Y_RNA.12-201ENST00000362393 112 ntBASIC0.28□□□□□ -2.36
CLIP4Q8N3C7 RNU6-686P-201ENST00000364839 107 ntBASIC0.28□□□□□ -2.36
CLIP4Q8N3C7 RNU6-382P-201ENST00000365181 106 ntBASIC0.28□□□□□ -2.36
CLIP4Q8N3C7 RNU6-1327P-201ENST00000365302 105 ntBASIC0.28□□□□□ -2.36
CLIP4Q8N3C7 RNU6-787P-201ENST00000384032 107 ntBASIC0.28□□□□□ -2.36
CLIP4Q8N3C7 YWHAEP3-201ENST00000582767 121 ntBASIC0.28□□□□□ -2.36
CLIP4Q8N3C7 MIR4677-201ENST00000584153 80 ntBASIC0.28□□□□□ -2.36
CLIP4Q8N3C7 MIR548AD-201ENST00000584780 82 ntBASIC0.28□□□□□ -2.36
CLIP4Q8N3C7 Y_RNA.313-201ENST00000365095 103 ntBASIC0.27□□□□□ -2.37
CLIP4Q8N3C7 MIR516B1-201ENST00000385211 90 ntBASIC0.27□□□□□ -2.37
CLIP4Q8N3C7 MIR652-201ENST00000385278 98 ntBASIC0.27□□□□□ -2.37
CLIP4Q8N3C7 SNORD75.2-201ENST00000408784 58 ntBASIC0.27□□□□□ -2.37
CLIP4Q8N3C7 AC069113.3-201ENST00000521019 150 ntBASIC0.27□□□□□ -2.37
CLIP4Q8N3C7 MIR1273G-201ENST00000577677 100 ntBASIC0.27□□□□□ -2.37
CLIP4Q8N3C7 SNORD114-4-201ENST00000363962 75 ntBASIC0.26□□□□□ -2.37
CLIP4Q8N3C7 RNU6-340P-201ENST00000364005 107 ntBASIC0.26□□□□□ -2.37
CLIP4Q8N3C7 RNU6-154P-201ENST00000384306 106 ntBASIC0.26□□□□□ -2.37
CLIP4Q8N3C7 Y_RNA.606-201ENST00000410579 103 ntBASIC0.26□□□□□ -2.37
CLIP4Q8N3C7 RNU7-24P-201ENST00000458867 62 ntBASIC0.26□□□□□ -2.37
CLIP4Q8N3C7 RNA5SP134-201ENST00000516492 96 ntBASIC0.26□□□□□ -2.37
CLIP4Q8N3C7 U6.81-201ENST00000612550 106 ntBASIC0.26□□□□□ -2.37
CLIP4Q8N3C7 MIR1245B-201ENST00000636115 69 ntBASIC0.26□□□□□ -2.37
CLIP4Q8N3C7 MIRLET7A1-201ENST00000362295 80 ntBASIC0.25□□□□□ -2.37
CLIP4Q8N3C7 RNU6-681P-201ENST00000364012 104 ntBASIC0.25□□□□□ -2.37
CLIP4Q8N3C7 SNORA72.7-201ENST00000516349 94 ntBASIC0.25□□□□□ -2.37
CLIP4Q8N3C7 DLEU2_3.2-201ENST00000612883 73 ntBASIC0.25□□□□□ -2.37
CLIP4Q8N3C7 AC084368.1-201ENST00000620935 65 ntBASIC0.25□□□□□ -2.37
CLIP4Q8N3C7 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
CLIP4Q8N3C7 RNU6-127P-201ENST00000390897 107 ntBASIC0.24□□□□□ -2.37
CLIP4Q8N3C7 RNU6-274P-201ENST00000459566 107 ntBASIC0.24□□□□□ -2.37
CLIP4Q8N3C7 MIR3925-201ENST00000584674 77 ntBASIC0.24□□□□□ -2.37
CLIP4Q8N3C7 MIR3202-2-201ENST00000635980 79 ntBASIC0.24□□□□□ -2.37
CLIP4Q8N3C7 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.24□□□□□ -2.37
CLIP4Q8N3C7 RNU6-315P-201ENST00000362666 107 ntBASIC0.23□□□□□ -2.37
CLIP4Q8N3C7 Y_RNA.219-201ENST00000364232 113 ntBASIC0.23□□□□□ -2.37
CLIP4Q8N3C7 RNU6-1124P-201ENST00000384169 107 ntBASIC0.23□□□□□ -2.37
CLIP4Q8N3C7 RNU6-380P-201ENST00000410207 107 ntBASIC0.23□□□□□ -2.37
CLIP4Q8N3C7 AL691482.2-201ENST00000457453 84 ntBASIC0.23□□□□□ -2.37
CLIP4Q8N3C7 SCARNA17.3-201ENST00000516381 125 ntBASIC0.23□□□□□ -2.37
CLIP4Q8N3C7 MIR5093-201ENST00000583199 100 ntBASIC0.23□□□□□ -2.37
CLIP4Q8N3C7 MIR643-201ENST00000385267 97 ntBASIC0.22□□□□□ -2.37
CLIP4Q8N3C7 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC0.22□□□□□ -2.37
CLIP4Q8N3C7 MIR4712-201ENST00000583750 82 ntBASIC0.22□□□□□ -2.37
CLIP4Q8N3C7 MIR4315-1-201ENST00000636800 73 ntBASIC0.22□□□□□ -2.37
CLIP4Q8N3C7 MIR4315-2-201ENST00000640925 73 ntBASIC0.22□□□□□ -2.37
CLIP4Q8N3C7 RNU6-1094P-201ENST00000362416 104 ntBASIC0.21□□□□□ -2.38
CLIP4Q8N3C7 Y_RNA.94-201ENST00000363068 106 ntBASIC0.21□□□□□ -2.38
CLIP4Q8N3C7 RNU6-782P-201ENST00000516852 104 ntBASIC0.21□□□□□ -2.38
CLIP4Q8N3C7 RNU7-188P-201ENST00000517063 64 ntBASIC0.21□□□□□ -2.38
CLIP4Q8N3C7 RNU6-303P-201ENST00000517091 106 ntBASIC0.21□□□□□ -2.38
CLIP4Q8N3C7 SCARNA11.2-201ENST00000517183 154 ntBASIC0.21□□□□□ -2.38
CLIP4Q8N3C7 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC0.21□□□□□ -2.38
CLIP4Q8N3C7 MIR6509-201ENST00000614603 85 ntBASIC0.21□□□□□ -2.38
CLIP4Q8N3C7 MIR924-201ENST00000638017 53 ntBASIC0.21□□□□□ -2.38
CLIP4Q8N3C7 MIR330-201ENST00000362196 94 ntBASIC0.2□□□□□ -2.38
CLIP4Q8N3C7 RNU6-228P-201ENST00000362700 106 ntBASIC0.2□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 170.8 ms