Protein–RNA interactions for Protein: Q6P087

RPUSD3, Mitochondrial mRNA pseudouridine synthase RPUSD3, humanhuman

Known RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3Q6P087 RNA5SP26-201ENST00000362406 119 ntBASIC-0.73□□□□□ -2.53
RPUSD3Q6P087 RNU6-990P-201ENST00000364385 104 ntBASIC-0.73□□□□□ -2.53
RPUSD3Q6P087 RNU6-10P-201ENST00000384036 107 ntBASIC-0.73□□□□□ -2.53
RPUSD3Q6P087 MIR889-201ENST00000401280 79 ntBASIC-0.73□□□□□ -2.53
RPUSD3Q6P087 SNORD2-201ENST00000459163 69 ntBASIC-0.73□□□□□ -2.53
RPUSD3Q6P087 RNA5SP67-201ENST00000516422 131 ntBASIC-0.73□□□□□ -2.53
RPUSD3Q6P087 AL445584.3-201ENST00000617173 78 ntBASIC-0.73□□□□□ -2.53
RPUSD3Q6P087 MIR6818-201ENST00000621576 65 ntBASIC-0.73□□□□□ -2.53
RPUSD3Q6P087 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-0.73□□□□□ -2.53
RPUSD3Q6P087 SNORD115-22-201ENST00000364456 82 ntBASIC-0.74□□□□□ -2.53
RPUSD3Q6P087 Y_RNA.309-201ENST00000365046 111 ntBASIC-0.74□□□□□ -2.53
RPUSD3Q6P087 MIR29B1-201ENST00000385015 81 ntBASIC-0.74□□□□□ -2.53
RPUSD3Q6P087 MIR124-2-201ENST00000385081 109 ntBASIC-0.74□□□□□ -2.53
RPUSD3Q6P087 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.74□□□□□ -2.53
RPUSD3Q6P087 RNY1P9-201ENST00000532431 109 ntBASIC-0.74□□□□□ -2.53
RPUSD3Q6P087 RNU6-226P-201ENST00000363778 107 ntBASIC-0.75□□□□□ -2.53
RPUSD3Q6P087 SNORA24B-201ENST00000384176 131 ntBASIC-0.75□□□□□ -2.53
RPUSD3Q6P087 RNU6-935P-201ENST00000410371 100 ntBASIC-0.75□□□□□ -2.53
RPUSD3Q6P087 AP002795.1-201ENST00000534879 84 ntBASIC-0.75□□□□□ -2.53
RPUSD3Q6P087 MIR548AX-201ENST00000580117 73 ntBASIC-0.75□□□□□ -2.53
RPUSD3Q6P087 Y_RNA.150-201ENST00000363562 102 ntBASIC-0.76□□□□□ -2.53
RPUSD3Q6P087 YWHAEP3-201ENST00000582767 121 ntBASIC-0.76□□□□□ -2.53
RPUSD3Q6P087 RNA5SP192-201ENST00000364404 120 ntBASIC-0.77□□□□□ -2.53
RPUSD3Q6P087 Y_RNA.343-201ENST00000365354 112 ntBASIC-0.77□□□□□ -2.53
RPUSD3Q6P087 RNU6-886P-201ENST00000384319 105 ntBASIC-0.77□□□□□ -2.53
RPUSD3Q6P087 SNORD18.2-201ENST00000459604 70 ntBASIC-0.77□□□□□ -2.53
RPUSD3Q6P087 SNORD63.1-201ENST00000516178 80 ntBASIC-0.77□□□□□ -2.53
RPUSD3Q6P087 Y_RNA.677-201ENST00000516401 85 ntBASIC-0.77□□□□□ -2.53
RPUSD3Q6P087 MIR548AG1-201ENST00000579932 66 ntBASIC-0.77□□□□□ -2.53
RPUSD3Q6P087 MIR6502-201ENST00000617296 76 ntBASIC-0.77□□□□□ -2.53
RPUSD3Q6P087 RNU6-774P-201ENST00000363238 107 ntBASIC-0.78□□□□□ -2.53
RPUSD3Q6P087 SNORA63.6-201ENST00000364921 119 ntBASIC-0.78□□□□□ -2.53
RPUSD3Q6P087 MIR451A-201ENST00000385059 72 ntBASIC-0.78□□□□□ -2.53
RPUSD3Q6P087 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.78□□□□□ -2.53
RPUSD3Q6P087 SNORD90-201ENST00000391145 111 ntBASIC-0.78□□□□□ -2.53
RPUSD3Q6P087 U3.27-201ENST00000391237 200 ntBASIC-0.78□□□□□ -2.53
RPUSD3Q6P087 RNA5SP461-201ENST00000516451 104 ntBASIC-0.78□□□□□ -2.53
RPUSD3Q6P087 AC132825.6-201ENST00000638861 357 ntBASIC-0.78□□□□□ -2.53
RPUSD3Q6P087 RNU6-495P-201ENST00000362995 107 ntBASIC-0.79□□□□□ -2.54
RPUSD3Q6P087 SNORD114-4-201ENST00000363962 75 ntBASIC-0.79□□□□□ -2.54
RPUSD3Q6P087 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.79□□□□□ -2.54
RPUSD3Q6P087 SNORD75.2-201ENST00000408784 58 ntBASIC-0.79□□□□□ -2.54
RPUSD3Q6P087 MIR4679-2-201ENST00000578358 77 ntBASIC-0.79□□□□□ -2.54
RPUSD3Q6P087 MIR4694-201ENST00000578534 80 ntBASIC-0.79□□□□□ -2.54
RPUSD3Q6P087 AL353803.5-201ENST00000599815 141 ntBASIC-0.79□□□□□ -2.54
RPUSD3Q6P087 MIR6129-201ENST00000616087 109 ntBASIC-0.79□□□□□ -2.54
RPUSD3Q6P087 AC091912.2-201ENST00000624798 167 ntBASIC-0.79□□□□□ -2.54
RPUSD3Q6P087 MIR409-201ENST00000362237 79 ntBASIC-0.8□□□□□ -2.54
RPUSD3Q6P087 Y_RNA.163-201ENST00000363702 113 ntBASIC-0.8□□□□□ -2.54
RPUSD3Q6P087 Y_RNA.244-201ENST00000364484 109 ntBASIC-0.8□□□□□ -2.54
RPUSD3Q6P087 RNU6-132P-201ENST00000383863 107 ntBASIC-0.8□□□□□ -2.54
RPUSD3Q6P087 SNORA40-201ENST00000388090 126 ntBASIC-0.8□□□□□ -2.54
RPUSD3Q6P087 RNU7-85P-201ENST00000458851 63 ntBASIC-0.8□□□□□ -2.54
RPUSD3Q6P087 snoU83B.1-201ENST00000517136 88 ntBASIC-0.8□□□□□ -2.54
RPUSD3Q6P087 MIR3140-201ENST00000583685 90 ntBASIC-0.8□□□□□ -2.54
RPUSD3Q6P087 FAS-AS1.1-201ENST00000615327 126 ntBASIC-0.8□□□□□ -2.54
RPUSD3Q6P087 RNU6-208P-201ENST00000362431 107 ntBASIC-0.81□□□□□ -2.54
RPUSD3Q6P087 MIR587-201ENST00000384845 96 ntBASIC-0.81□□□□□ -2.54
RPUSD3Q6P087 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-0.81□□□□□ -2.54
RPUSD3Q6P087 RNU6-426P-201ENST00000516464 97 ntBASIC-0.81□□□□□ -2.54
RPUSD3Q6P087 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-0.81□□□□□ -2.54
RPUSD3Q6P087 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.81□□□□□ -2.54
RPUSD3Q6P087 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.81□□□□□ -2.54
RPUSD3Q6P087 MIR6874-201ENST00000635894 71 ntBASIC-0.81□□□□□ -2.54
RPUSD3Q6P087 MIRLET7F1-201ENST00000362202 87 ntBASIC-0.82□□□□□ -2.54
RPUSD3Q6P087 SNORA2.1-201ENST00000363089 137 ntBASIC-0.82□□□□□ -2.54
RPUSD3Q6P087 MIR527-201ENST00000385244 85 ntBASIC-0.82□□□□□ -2.54
RPUSD3Q6P087 SNORA26.4-201ENST00000391188 123 ntBASIC-0.82□□□□□ -2.54
RPUSD3Q6P087 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.82□□□□□ -2.54
RPUSD3Q6P087 RNU6-65P-201ENST00000516332 98 ntBASIC-0.82□□□□□ -2.54
RPUSD3Q6P087 RNU6-412P-201ENST00000516434 106 ntBASIC-0.82□□□□□ -2.54
RPUSD3Q6P087 RNU6-719P-201ENST00000516671 104 ntBASIC-0.82□□□□□ -2.54
RPUSD3Q6P087 RNU6-706P-201ENST00000517229 104 ntBASIC-0.82□□□□□ -2.54
RPUSD3Q6P087 AC138207.3-201ENST00000585289 166 ntBASIC-0.82□□□□□ -2.54
RPUSD3Q6P087 AL157777.2-201ENST00000258070 137 ntBASIC-0.83□□□□□ -2.54
RPUSD3Q6P087 Y_RNA.495-201ENST00000384435 112 ntBASIC-0.83□□□□□ -2.54
RPUSD3Q6P087 RNU6-540P-201ENST00000384622 101 ntBASIC-0.83□□□□□ -2.54
RPUSD3Q6P087 RNA5SP86-201ENST00000390869 98 ntBASIC-0.83□□□□□ -2.54
RPUSD3Q6P087 SNORD19-201ENST00000391191 68 ntBASIC-0.83□□□□□ -2.54
RPUSD3Q6P087 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-0.83□□□□□ -2.54
RPUSD3Q6P087 MIR4439-201ENST00000583746 80 ntBASIC-0.83□□□□□ -2.54
RPUSD3Q6P087 SNORA33.1-201ENST00000364957 130 ntBASIC-0.84□□□□□ -2.54
RPUSD3Q6P087 SNORA62.4-201ENST00000365504 151 ntBASIC-0.84□□□□□ -2.54
RPUSD3Q6P087 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.84□□□□□ -2.54
RPUSD3Q6P087 MTND4LP9-201ENST00000427694 174 ntBASIC-0.84□□□□□ -2.54
RPUSD3Q6P087 snoU13.17-201ENST00000458802 104 ntBASIC-0.84□□□□□ -2.54
RPUSD3Q6P087 MIR5591-201ENST00000578248 65 ntBASIC-0.84□□□□□ -2.54
RPUSD3Q6P087 MIR4520-1-201ENST00000582609 70 ntBASIC-0.84□□□□□ -2.54
RPUSD3Q6P087 RNU6-1216P-201ENST00000362590 107 ntBASIC-0.85□□□□□ -2.55
RPUSD3Q6P087 RNA5SP331-201ENST00000364986 107 ntBASIC-0.85□□□□□ -2.55
RPUSD3Q6P087 RNU6-246P-201ENST00000384702 107 ntBASIC-0.85□□□□□ -2.55
RPUSD3Q6P087 MIR577-201ENST00000385196 96 ntBASIC-0.85□□□□□ -2.55
RPUSD3Q6P087 AC021146.9-201ENST00000512503 156 ntBASIC-0.85□□□□□ -2.55
RPUSD3Q6P087 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.85□□□□□ -2.55
RPUSD3Q6P087 MTND5P41-201ENST00000517498 206 ntBASIC-0.85□□□□□ -2.55
RPUSD3Q6P087 MIR4536-1-201ENST00000583537 88 ntBASIC-0.85□□□□□ -2.55
RPUSD3Q6P087 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-0.85□□□□□ -2.55
RPUSD3Q6P087 AC025521.1-201ENST00000621624 286 ntBASIC-0.85□□□□□ -2.55
RPUSD3Q6P087 snoR1.1-201ENST00000628177 80 ntBASIC-0.85□□□□□ -2.55
RPUSD3Q6P087 RNY3P2-201ENST00000362918 102 ntBASIC-0.86□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 189.9 ms