Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 RNY3P14-201ENST00000384309 102 ntBASIC-3.79□□□□□ -3.02
CCDC58Q4VC31 MIR548I1-201ENST00000408810 149 ntBASIC-3.79□□□□□ -3.02
CCDC58Q4VC31 RNY3P8-201ENST00000411366 126 ntBASIC-3.79□□□□□ -3.02
CCDC58Q4VC31 MTATP6P29-201ENST00000415057 132 ntBASIC-3.79□□□□□ -3.02
CCDC58Q4VC31 RNU6-1018P-201ENST00000516577 106 ntBASIC-3.79□□□□□ -3.02
CCDC58Q4VC31 AC006362.1-201ENST00000567392 174 ntBASIC-3.79□□□□□ -3.02
CCDC58Q4VC31 SNORA27.2-201ENST00000363365 126 ntBASIC-3.8□□□□□ -3.02
CCDC58Q4VC31 Y_RNA.402-201ENST00000383972 102 ntBASIC-3.8□□□□□ -3.02
CCDC58Q4VC31 MIR581-201ENST00000384895 96 ntBASIC-3.8□□□□□ -3.02
CCDC58Q4VC31 SNORD115-46-201ENST00000390982 71 ntBASIC-3.8□□□□□ -3.02
CCDC58Q4VC31 AL118496.2-201ENST00000448300 230 ntBASIC-3.81□□□□□ -3.02
CCDC58Q4VC31 Y_RNA.635-201ENST00000459041 101 ntBASIC-3.81□□□□□ -3.02
CCDC58Q4VC31 Y_RNA.658-201ENST00000515990 97 ntBASIC-3.81□□□□□ -3.02
CCDC58Q4VC31 MIR5693-201ENST00000577722 73 ntBASIC-3.81□□□□□ -3.02
CCDC58Q4VC31 MIR3646-201ENST00000578301 84 ntBASIC-3.81□□□□□ -3.02
CCDC58Q4VC31 Y_RNA.445-201ENST00000384168 102 ntBASIC-3.82□□□□□ -3.02
CCDC58Q4VC31 MIR548AA1-201ENST00000384971 97 ntBASIC-3.82□□□□□ -3.02
CCDC58Q4VC31 SNORD116.3-201ENST00000517176 78 ntBASIC-3.82□□□□□ -3.02
CCDC58Q4VC31 AL513043.2-201ENST00000573941 143 ntBASIC-3.82□□□□□ -3.02
CCDC58Q4VC31 AL442128.1-201ENST00000615151 90 ntBASIC-3.82□□□□□ -3.02
CCDC58Q4VC31 Y_RNA.325-201ENST00000365171 122 ntBASIC-3.83□□□□□ -3.02
CCDC58Q4VC31 MT-TW-201ENST00000387382 68 ntBASIC-3.83□□□□□ -3.02
CCDC58Q4VC31 Y_RNA.812-201ENST00000610788 101 ntBASIC-3.83□□□□□ -3.02
CCDC58Q4VC31 Y_RNA.784-201ENST00000613803 101 ntBASIC-3.83□□□□□ -3.02
CCDC58Q4VC31 Y_RNA.787-201ENST00000616522 101 ntBASIC-3.83□□□□□ -3.02
CCDC58Q4VC31 Y_RNA.780-201ENST00000617336 101 ntBASIC-3.83□□□□□ -3.02
CCDC58Q4VC31 Y_RNA.801-201ENST00000619005 101 ntBASIC-3.83□□□□□ -3.02
CCDC58Q4VC31 RNU6-643P-201ENST00000384018 107 ntBASIC-3.84□□□□□ -3.02
CCDC58Q4VC31 SNORA18.5-201ENST00000516616 101 ntBASIC-3.84□□□□□ -3.02
CCDC58Q4VC31 MTRNR2L9-201ENST00000622562 75 ntBASIC-3.84□□□□□ -3.02
CCDC58Q4VC31 AC090582.1-201ENST00000636321 199 ntBASIC-3.84□□□□□ -3.02
CCDC58Q4VC31 RNU6-363P-201ENST00000362895 105 ntBASIC-3.85□□□□□ -3.03
CCDC58Q4VC31 RNU6-103P-201ENST00000363686 107 ntBASIC-3.85□□□□□ -3.03
CCDC58Q4VC31 RNU6-1289P-201ENST00000384431 106 ntBASIC-3.85□□□□□ -3.03
CCDC58Q4VC31 Y_RNA.512-201ENST00000384518 102 ntBASIC-3.85□□□□□ -3.03
CCDC58Q4VC31 SNORD4B-201ENST00000459083 72 ntBASIC-3.85□□□□□ -3.03
CCDC58Q4VC31 RNU6-803P-201ENST00000516034 102 ntBASIC-3.85□□□□□ -3.03
CCDC58Q4VC31 RNU7-174P-201ENST00000516248 59 ntBASIC-3.85□□□□□ -3.03
CCDC58Q4VC31 RNU5F-1-201ENST00000362507 117 ntBASIC-3.86□□□□□ -3.03
CCDC58Q4VC31 Y_RNA.89-201ENST00000363031 102 ntBASIC-3.86□□□□□ -3.03
CCDC58Q4VC31 RNY1P1-201ENST00000364372 112 ntBASIC-3.86□□□□□ -3.03
CCDC58Q4VC31 RNU6-587P-201ENST00000391282 106 ntBASIC-3.86□□□□□ -3.03
CCDC58Q4VC31 Y_RNA.651-201ENST00000459380 103 ntBASIC-3.86□□□□□ -3.03
CCDC58Q4VC31 MIR3163-201ENST00000581592 73 ntBASIC-3.86□□□□□ -3.03
CCDC58Q4VC31 AC021753.1-201ENST00000635724 168 ntBASIC-3.86□□□□□ -3.03
CCDC58Q4VC31 MIR548C-201ENST00000384815 97 ntBASIC-3.87□□□□□ -3.03
CCDC58Q4VC31 Z99129.1-201ENST00000612510 255 ntBASIC-3.87□□□□□ -3.03
CCDC58Q4VC31 AC025253.1-201ENST00000613623 543 ntBASIC-3.87□□□□□ -3.03
CCDC58Q4VC31 RNU6-1324P-201ENST00000384222 107 ntBASIC-3.88□□□□□ -3.03
CCDC58Q4VC31 RNU6-1081P-201ENST00000384537 107 ntBASIC-3.88□□□□□ -3.03
CCDC58Q4VC31 RNU6-1113P-201ENST00000384348 107 ntBASIC-3.89□□□□□ -3.03
CCDC58Q4VC31 RNU6-1271P-201ENST00000517049 105 ntBASIC-3.89□□□□□ -3.03
CCDC58Q4VC31 MIR548Z-201ENST00000584743 97 ntBASIC-3.89□□□□□ -3.03
CCDC58Q4VC31 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-3.89□□□□□ -3.03
CCDC58Q4VC31 RNU6-238P-201ENST00000363313 106 ntBASIC-3.9□□□□□ -3.03
CCDC58Q4VC31 RNY4P14-201ENST00000363656 96 ntBASIC-3.9□□□□□ -3.03
CCDC58Q4VC31 RNU6-752P-201ENST00000516376 102 ntBASIC-3.9□□□□□ -3.03
CCDC58Q4VC31 AL137067.1-201ENST00000615933 120 ntBASIC-3.9□□□□□ -3.03
CCDC58Q4VC31 RNU6-508P-201ENST00000363231 103 ntBASIC-3.91□□□□□ -3.04
CCDC58Q4VC31 RNY4P25-201ENST00000459254 96 ntBASIC-3.91□□□□□ -3.04
CCDC58Q4VC31 MTND4P17-201ENST00000470444 350 ntBASIC-3.91□□□□□ -3.04
CCDC58Q4VC31 AC104985.2-201ENST00000620598 500 ntBASIC-3.91□□□□□ -3.04
CCDC58Q4VC31 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-3.91□□□□□ -3.04
CCDC58Q4VC31 Y_RNA.163-201ENST00000363702 113 ntBASIC-3.92□□□□□ -3.04
CCDC58Q4VC31 Y_RNA.183-201ENST00000363882 113 ntBASIC-3.92□□□□□ -3.04
CCDC58Q4VC31 RNU6-1277P-201ENST00000364561 107 ntBASIC-3.92□□□□□ -3.04
CCDC58Q4VC31 Y_RNA.505-201ENST00000384489 102 ntBASIC-3.92□□□□□ -3.04
CCDC58Q4VC31 MTND1P29-201ENST00000448112 647 ntBASIC-3.92□□□□□ -3.04
CCDC58Q4VC31 MIR3144-201ENST00000579460 79 ntBASIC-3.92□□□□□ -3.04
CCDC58Q4VC31 MIR3611-201ENST00000584484 83 ntBASIC-3.92□□□□□ -3.04
CCDC58Q4VC31 SNORD58B-201ENST00000607313 66 ntBASIC-3.92□□□□□ -3.04
CCDC58Q4VC31 RNU6-340P-201ENST00000364005 107 ntBASIC-3.93□□□□□ -3.04
CCDC58Q4VC31 Y_RNA.275-201ENST00000364726 110 ntBASIC-3.93□□□□□ -3.04
CCDC58Q4VC31 RNU6-669P-201ENST00000365575 107 ntBASIC-3.93□□□□□ -3.04
CCDC58Q4VC31 Y_RNA.398-201ENST00000383952 99 ntBASIC-3.93□□□□□ -3.04
CCDC58Q4VC31 Y_RNA.483-201ENST00000384380 101 ntBASIC-3.93□□□□□ -3.04
CCDC58Q4VC31 RNU6-1215P-201ENST00000384441 102 ntBASIC-3.93□□□□□ -3.04
CCDC58Q4VC31 SNORD63.2-201ENST00000516303 64 ntBASIC-3.93□□□□□ -3.04
CCDC58Q4VC31 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-3.93□□□□□ -3.04
CCDC58Q4VC31 Y_RNA.233-201ENST00000364407 101 ntBASIC-3.94□□□□□ -3.04
CCDC58Q4VC31 RNU6-409P-201ENST00000384114 104 ntBASIC-3.94□□□□□ -3.04
CCDC58Q4VC31 SNORD116-6-201ENST00000384711 96 ntBASIC-3.94□□□□□ -3.04
CCDC58Q4VC31 RNU6-1009P-201ENST00000390996 107 ntBASIC-3.94□□□□□ -3.04
CCDC58Q4VC31 Y_RNA.606-201ENST00000410579 103 ntBASIC-3.94□□□□□ -3.04
CCDC58Q4VC31 Y_RNA.79-201ENST00000362992 113 ntBASIC-3.95□□□□□ -3.04
CCDC58Q4VC31 Y_RNA.496-201ENST00000384444 101 ntBASIC-3.95□□□□□ -3.04
CCDC58Q4VC31 MIR4744-201ENST00000581563 82 ntBASIC-3.95□□□□□ -3.04
CCDC58Q4VC31 Y_RNA.830-201ENST00000628531 96 ntBASIC-3.95□□□□□ -3.04
CCDC58Q4VC31 RNU6-834P-201ENST00000362367 110 ntBASIC-3.96□□□□□ -3.04
CCDC58Q4VC31 Y_RNA.31-201ENST00000362574 102 ntBASIC-3.96□□□□□ -3.04
CCDC58Q4VC31 Y_RNA.134-201ENST00000363435 105 ntBASIC-3.96□□□□□ -3.04
CCDC58Q4VC31 RNU6-645P-201ENST00000364649 106 ntBASIC-3.96□□□□□ -3.04
CCDC58Q4VC31 RNU6-314P-201ENST00000516574 104 ntBASIC-3.96□□□□□ -3.04
CCDC58Q4VC31 Y_RNA.155-201ENST00000363632 101 ntBASIC-3.97□□□□□ -3.04
CCDC58Q4VC31 SNORD2.1-201ENST00000458762 69 ntBASIC-3.97□□□□□ -3.04
CCDC58Q4VC31 RNU6-971P-201ENST00000516920 106 ntBASIC-3.97□□□□□ -3.04
CCDC58Q4VC31 RNU6-106P-201ENST00000384405 107 ntBASIC-3.98□□□□□ -3.05
CCDC58Q4VC31 Y_RNA.573-201ENST00000384763 105 ntBASIC-3.98□□□□□ -3.05
CCDC58Q4VC31 U4.4-201ENST00000620626 117 ntBASIC-3.98□□□□□ -3.05
CCDC58Q4VC31 RNU6-828P-201ENST00000364876 107 ntBASIC-3.99□□□□□ -3.05
Retrieved 100 of 98,524 protein–RNA pairs in 171.6 ms