Protein–RNA interactions for Protein: Q14994

NR1I3, Nuclear receptor subfamily 1 group I member 3, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3Q14994 SNORD110-201ENST00000408189 75 ntBASIC0.9□□□□□ -2.27
NR1I3Q14994 AC006210.1-201ENST00000424882 111 ntBASIC0.9□□□□□ -2.27
NR1I3Q14994 AC125388.1-201ENST00000459631 156 ntBASIC0.9□□□□□ -2.27
NR1I3Q14994 AC005520.4-201ENST00000604337 90 ntBASIC0.9□□□□□ -2.27
NR1I3Q14994 MIR6715A-201ENST00000615929 79 ntBASIC0.9□□□□□ -2.27
NR1I3Q14994 AL109933.3-201ENST00000619095 188 ntBASIC0.9□□□□□ -2.27
NR1I3Q14994 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.89□□□□□ -2.27
NR1I3Q14994 MIR548AE1-201ENST00000583292 70 ntBASIC0.89□□□□□ -2.27
NR1I3Q14994 SNORA25.18-201ENST00000607153 114 ntBASIC0.89□□□□□ -2.27
NR1I3Q14994 Y_RNA.443-201ENST00000384135 111 ntBASIC0.88□□□□□ -2.27
NR1I3Q14994 MIR608-201ENST00000384820 100 ntBASIC0.88□□□□□ -2.27
NR1I3Q14994 MIR1265-201ENST00000408444 86 ntBASIC0.88□□□□□ -2.27
NR1I3Q14994 AC069271.1-201ENST00000445577 156 ntBASIC0.88□□□□□ -2.27
NR1I3Q14994 snoU13.13-201ENST00000458842 104 ntBASIC0.88□□□□□ -2.27
NR1I3Q14994 MIR4698-201ENST00000577795 80 ntBASIC0.88□□□□□ -2.27
NR1I3Q14994 MIR3973-201ENST00000579824 107 ntBASIC0.88□□□□□ -2.27
NR1I3Q14994 MIR140-201ENST00000385282 100 ntBASIC0.87□□□□□ -2.27
NR1I3Q14994 AC104984.5-201ENST00000586878 94 ntBASIC0.87□□□□□ -2.27
NR1I3Q14994 snoU13.31-201ENST00000607291 104 ntBASIC0.87□□□□□ -2.27
NR1I3Q14994 MIR6857-201ENST00000613267 93 ntBASIC0.87□□□□□ -2.27
NR1I3Q14994 AC073869.9-201ENST00000641610 120 ntBASIC0.87□□□□□ -2.27
NR1I3Q14994 RNU6-392P-201ENST00000364926 101 ntBASIC0.86□□□□□ -2.27
NR1I3Q14994 MIR652-201ENST00000385278 98 ntBASIC0.86□□□□□ -2.27
NR1I3Q14994 RPL39P28-201ENST00000465655 155 ntBASIC0.86□□□□□ -2.27
NR1I3Q14994 SNORA2.1-201ENST00000363089 137 ntBASIC0.85□□□□□ -2.27
NR1I3Q14994 SNORD114-4-201ENST00000363962 75 ntBASIC0.85□□□□□ -2.27
NR1I3Q14994 RNU6-645P-201ENST00000364649 106 ntBASIC0.85□□□□□ -2.27
NR1I3Q14994 MIR7-2-201ENST00000384970 110 ntBASIC0.85□□□□□ -2.27
NR1I3Q14994 MIR146A-201ENST00000385201 99 ntBASIC0.85□□□□□ -2.27
NR1I3Q14994 AC092634.7-201ENST00000621022 103 ntBASIC0.85□□□□□ -2.27
NR1I3Q14994 Y_RNA.407-201ENST00000383986 113 ntBASIC0.84□□□□□ -2.27
NR1I3Q14994 RNA5SP458-201ENST00000516188 119 ntBASIC0.84□□□□□ -2.27
NR1I3Q14994 MIR373-201ENST00000362273 69 ntBASIC0.83□□□□□ -2.28
NR1I3Q14994 RNU6-668P-201ENST00000364180 107 ntBASIC0.83□□□□□ -2.28
NR1I3Q14994 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.83□□□□□ -2.28
NR1I3Q14994 MTND4LP1-201ENST00000446263 157 ntBASIC0.83□□□□□ -2.28
NR1I3Q14994 RNU1-29P-201ENST00000606574 126 ntBASIC0.83□□□□□ -2.28
NR1I3Q14994 SNORA25.4-201ENST00000363666 124 ntBASIC0.82□□□□□ -2.28
NR1I3Q14994 Y_RNA.205-201ENST00000364128 113 ntBASIC0.82□□□□□ -2.28
NR1I3Q14994 RNU4-54P-201ENST00000516428 129 ntBASIC0.82□□□□□ -2.28
NR1I3Q14994 MIR4769-201ENST00000584126 77 ntBASIC0.82□□□□□ -2.28
NR1I3Q14994 MIR582-201ENST00000365731 98 ntBASIC0.81□□□□□ -2.28
NR1I3Q14994 HMGN2P22-201ENST00000427588 175 ntBASIC0.81□□□□□ -2.28
NR1I3Q14994 PSMC1P5-201ENST00000512850 177 ntBASIC0.81□□□□□ -2.28
NR1I3Q14994 SCARNA17.3-201ENST00000516381 125 ntBASIC0.81□□□□□ -2.28
NR1I3Q14994 RNU6-656P-201ENST00000516785 107 ntBASIC0.81□□□□□ -2.28
NR1I3Q14994 SNORD118-201ENST00000363593 134 ntBASIC0.8□□□□□ -2.28
NR1I3Q14994 SNORD114-27-201ENST00000363766 70 ntBASIC0.8□□□□□ -2.28
NR1I3Q14994 AC021146.9-201ENST00000512503 156 ntBASIC0.8□□□□□ -2.28
NR1I3Q14994 AC211469.2-201ENST00000605461 205 ntBASIC0.8□□□□□ -2.28
NR1I3Q14994 RNU6-471P-201ENST00000383944 106 ntBASIC0.79□□□□□ -2.28
NR1I3Q14994 Y_RNA.423-201ENST00000384057 113 ntBASIC0.79□□□□□ -2.28
NR1I3Q14994 SNORA40.8-201ENST00000411034 126 ntBASIC0.79□□□□□ -2.28
NR1I3Q14994 MIR4298-201ENST00000584380 73 ntBASIC0.79□□□□□ -2.28
NR1I3Q14994 MIR6739-201ENST00000622461 75 ntBASIC0.79□□□□□ -2.28
NR1I3Q14994 MIR6767-201ENST00000637302 66 ntBASIC0.79□□□□□ -2.28
NR1I3Q14994 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.79□□□□□ -2.28
NR1I3Q14994 MIR9-2-201ENST00000384838 87 ntBASIC0.78□□□□□ -2.28
NR1I3Q14994 TRMT112P2-201ENST00000512910 132 ntBASIC0.78□□□□□ -2.28
NR1I3Q14994 RNU6-1232P-201ENST00000516299 86 ntBASIC0.78□□□□□ -2.28
NR1I3Q14994 uc_338.10-201ENST00000621872 182 ntBASIC0.78□□□□□ -2.28
NR1I3Q14994 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC0.78□□□□□ -2.28
NR1I3Q14994 MIR6866-201ENST00000638146 69 ntBASIC0.78□□□□□ -2.28
NR1I3Q14994 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
NR1I3Q14994 MIR4498-201ENST00000577599 66 ntBASIC0.77□□□□□ -2.29
NR1I3Q14994 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.76□□□□□ -2.29
NR1I3Q14994 MIR548E-201ENST00000408287 88 ntBASIC0.76□□□□□ -2.29
NR1I3Q14994 RNU6-229P-201ENST00000516614 102 ntBASIC0.76□□□□□ -2.29
NR1I3Q14994 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
NR1I3Q14994 MIR518A1-201ENST00000385068 85 ntBASIC0.75□□□□□ -2.29
NR1I3Q14994 SNORD71-201ENST00000411292 86 ntBASIC0.75□□□□□ -2.29
NR1I3Q14994 AL157398.1-201ENST00000452981 186 ntBASIC0.75□□□□□ -2.29
NR1I3Q14994 SNORA33.1-201ENST00000364957 130 ntBASIC0.74□□□□□ -2.29
NR1I3Q14994 SNORA2A-201ENST00000383885 135 ntBASIC0.74□□□□□ -2.29
NR1I3Q14994 RNU6-1162P-201ENST00000384443 104 ntBASIC0.74□□□□□ -2.29
NR1I3Q14994 RNU6-110P-201ENST00000384508 104 ntBASIC0.74□□□□□ -2.29
NR1I3Q14994 MIR548C-201ENST00000384815 97 ntBASIC0.74□□□□□ -2.29
NR1I3Q14994 MIR5706-201ENST00000579841 80 ntBASIC0.74□□□□□ -2.29
NR1I3Q14994 MIR4511-201ENST00000582784 87 ntBASIC0.74□□□□□ -2.29
NR1I3Q14994 MIR4653-201ENST00000585107 83 ntBASIC0.74□□□□□ -2.29
NR1I3Q14994 AL590095.2-201ENST00000604136 117 ntBASIC0.74□□□□□ -2.29
NR1I3Q14994 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.74□□□□□ -2.29
NR1I3Q14994 Y_RNA.125-201ENST00000363371 111 ntBASIC0.73□□□□□ -2.29
NR1I3Q14994 Y_RNA.250-201ENST00000364542 110 ntBASIC0.73□□□□□ -2.29
NR1I3Q14994 SNORA63.6-201ENST00000364921 119 ntBASIC0.73□□□□□ -2.29
NR1I3Q14994 MIR521-2-201ENST00000384818 87 ntBASIC0.73□□□□□ -2.29
NR1I3Q14994 RNU6-321P-201ENST00000410912 106 ntBASIC0.73□□□□□ -2.29
NR1I3Q14994 MIR6755-201ENST00000619993 66 ntBASIC0.73□□□□□ -2.29
NR1I3Q14994 Y_RNA.633-201ENST00000459107 95 ntBASIC0.72□□□□□ -2.29
NR1I3Q14994 RNU6-1089P-201ENST00000516473 104 ntBASIC0.72□□□□□ -2.29
NR1I3Q14994 MIR548V-201ENST00000584165 80 ntBASIC0.72□□□□□ -2.29
NR1I3Q14994 MIR96-201ENST00000362288 78 ntBASIC0.71□□□□□ -2.3
NR1I3Q14994 Y_RNA.375-201ENST00000365625 101 ntBASIC0.71□□□□□ -2.3
NR1I3Q14994 MIR516B1-201ENST00000385211 90 ntBASIC0.71□□□□□ -2.3
NR1I3Q14994 AL603825.1-201ENST00000438481 80 ntBASIC0.7□□□□□ -2.3
NR1I3Q14994 MIR6835-201ENST00000621552 64 ntBASIC0.7□□□□□ -2.3
NR1I3Q14994 AC103706.3-201ENST00000636297 85 ntBASIC0.7□□□□□ -2.3
NR1I3Q14994 RNA5SP299-201ENST00000391203 116 ntBASIC0.69□□□□□ -2.3
NR1I3Q14994 AC098934.3-201ENST00000430450 190 ntBASIC0.69□□□□□ -2.3
NR1I3Q14994 RNU6-945P-201ENST00000383947 107 ntBASIC0.68□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 178 ms