Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 MIR9-2-201ENST00000384838 87 ntBASIC1.2□□□□□ -2.22
SOX4Q06945 RNA5SP484-201ENST00000458857 111 ntBASIC1.2□□□□□ -2.22
SOX4Q06945 AC103706.3-201ENST00000636297 85 ntBASIC1.2□□□□□ -2.22
SOX4Q06945 RNU6-990P-201ENST00000364385 104 ntBASIC1.19□□□□□ -2.22
SOX4Q06945 AL162376.1-201ENST00000624117 175 ntBASIC1.19□□□□□ -2.22
SOX4Q06945 SNORA2.1-201ENST00000363089 137 ntBASIC1.18□□□□□ -2.22
SOX4Q06945 RNA5SP325-201ENST00000363756 130 ntBASIC1.18□□□□□ -2.22
SOX4Q06945 Y_RNA.178-201ENST00000363832 102 ntBASIC1.18□□□□□ -2.22
SOX4Q06945 Y_RNA.224-201ENST00000364308 111 ntBASIC1.18□□□□□ -2.22
SOX4Q06945 RNU6-645P-201ENST00000364649 106 ntBASIC1.18□□□□□ -2.22
SOX4Q06945 SNORD114-22-201ENST00000365423 72 ntBASIC1.18□□□□□ -2.22
SOX4Q06945 Y_RNA.374-201ENST00000365606 101 ntBASIC1.18□□□□□ -2.22
SOX4Q06945 RNU6-42P-201ENST00000384165 107 ntBASIC1.18□□□□□ -2.22
SOX4Q06945 RNA5SP227-201ENST00000516184 113 ntBASIC1.18□□□□□ -2.22
SOX4Q06945 RNA5SP147-201ENST00000516493 109 ntBASIC1.18□□□□□ -2.22
SOX4Q06945 SNORA40.17-201ENST00000517256 115 ntBASIC1.18□□□□□ -2.22
SOX4Q06945 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.18□□□□□ -2.22
SOX4Q06945 AC018659.1-201ENST00000551083 169 ntBASIC1.18□□□□□ -2.22
SOX4Q06945 MIR4295-201ENST00000585286 85 ntBASIC1.18□□□□□ -2.22
SOX4Q06945 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
SOX4Q06945 SNORD114-4-201ENST00000363962 75 ntBASIC1.17□□□□□ -2.22
SOX4Q06945 RNU1-93P-201ENST00000364704 169 ntBASIC1.17□□□□□ -2.22
SOX4Q06945 RNU6-1187P-201ENST00000364771 110 ntBASIC1.17□□□□□ -2.22
SOX4Q06945 AC069503.3-201ENST00000618674 145 ntBASIC1.17□□□□□ -2.22
SOX4Q06945 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.16□□□□□ -2.22
SOX4Q06945 SNORA36.1-201ENST00000363424 132 ntBASIC1.16□□□□□ -2.22
SOX4Q06945 AC087343.1-201ENST00000477341 475 ntBASIC1.16□□□□□ -2.22
SOX4Q06945 SNORD114-26-201ENST00000363543 72 ntBASIC1.15□□□□□ -2.23
SOX4Q06945 RNU4-45P-201ENST00000365469 141 ntBASIC1.15□□□□□ -2.23
SOX4Q06945 RNA5SP268-201ENST00000516828 124 ntBASIC1.15□□□□□ -2.23
SOX4Q06945 SNORD114-21-201ENST00000606412 72 ntBASIC1.15□□□□□ -2.23
SOX4Q06945 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
SOX4Q06945 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.15□□□□□ -2.23
SOX4Q06945 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.14□□□□□ -2.23
SOX4Q06945 MIR6734-201ENST00000621166 68 ntBASIC1.14□□□□□ -2.23
SOX4Q06945 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
SOX4Q06945 RNA5SP220-201ENST00000516298 104 ntBASIC1.13□□□□□ -2.23
SOX4Q06945 RNA5SP94-201ENST00000516917 108 ntBASIC1.13□□□□□ -2.23
SOX4Q06945 MIR4452-201ENST00000583004 71 ntBASIC1.13□□□□□ -2.23
SOX4Q06945 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.13□□□□□ -2.23
SOX4Q06945 MIR6739-201ENST00000622461 75 ntBASIC1.13□□□□□ -2.23
SOX4Q06945 Y_RNA.375-201ENST00000365625 101 ntBASIC1.12□□□□□ -2.23
SOX4Q06945 Y_RNA.540-201ENST00000384638 111 ntBASIC1.12□□□□□ -2.23
SOX4Q06945 RNU6-656P-201ENST00000516785 107 ntBASIC1.12□□□□□ -2.23
SOX4Q06945 MIR6779-201ENST00000617283 64 ntBASIC1.12□□□□□ -2.23
SOX4Q06945 MIR1285-1-201ENST00000408593 84 ntBASIC1.11□□□□□ -2.23
SOX4Q06945 RNA5SP222-201ENST00000411039 105 ntBASIC1.11□□□□□ -2.23
SOX4Q06945 AC110620.1-201ENST00000416042 228 ntBASIC1.11□□□□□ -2.23
SOX4Q06945 RNU6-542P-201ENST00000516405 103 ntBASIC1.11□□□□□ -2.23
SOX4Q06945 MIR520E-201ENST00000384867 87 ntBASIC1.1□□□□□ -2.23
SOX4Q06945 MIR7107-201ENST00000611489 80 ntBASIC1.1□□□□□ -2.23
SOX4Q06945 MIR373-201ENST00000362273 69 ntBASIC1.09□□□□□ -2.23
SOX4Q06945 RNU4-38P-201ENST00000364472 129 ntBASIC1.09□□□□□ -2.23
SOX4Q06945 Y_RNA.250-201ENST00000364542 110 ntBASIC1.09□□□□□ -2.23
SOX4Q06945 SNORD110-201ENST00000408189 75 ntBASIC1.09□□□□□ -2.23
SOX4Q06945 AC006210.1-201ENST00000424882 111 ntBASIC1.09□□□□□ -2.23
SOX4Q06945 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.09□□□□□ -2.23
SOX4Q06945 snoU13.13-201ENST00000458842 104 ntBASIC1.09□□□□□ -2.23
SOX4Q06945 AL353765.1-201ENST00000605514 183 ntBASIC1.09□□□□□ -2.23
SOX4Q06945 Y_RNA.407-201ENST00000383986 113 ntBASIC1.08□□□□□ -2.24
SOX4Q06945 OR2A41P-201ENST00000473586 105 ntBASIC1.08□□□□□ -2.24
SOX4Q06945 RNU6-1162P-201ENST00000384443 104 ntBASIC1.07□□□□□ -2.24
SOX4Q06945 MIR652-201ENST00000385278 98 ntBASIC1.07□□□□□ -2.24
SOX4Q06945 RNU6-669P-201ENST00000365575 107 ntBASIC1.06□□□□□ -2.24
SOX4Q06945 RNU6-499P-201ENST00000365615 107 ntBASIC1.06□□□□□ -2.24
SOX4Q06945 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.06□□□□□ -2.24
SOX4Q06945 SCARNA17.3-201ENST00000516381 125 ntBASIC1.06□□□□□ -2.24
SOX4Q06945 RNU6-1089P-201ENST00000516473 104 ntBASIC1.06□□□□□ -2.24
SOX4Q06945 MIR4473-201ENST00000583731 91 ntBASIC1.06□□□□□ -2.24
SOX4Q06945 AC092634.7-201ENST00000621022 103 ntBASIC1.06□□□□□ -2.24
SOX4Q06945 RNA5SP215-201ENST00000363440 122 ntBASIC1.05□□□□□ -2.24
SOX4Q06945 MIR521-2-201ENST00000384818 87 ntBASIC1.05□□□□□ -2.24
SOX4Q06945 RPS29P1-201ENST00000465274 159 ntBASIC1.05□□□□□ -2.24
SOX4Q06945 MIR3973-201ENST00000579824 107 ntBASIC1.05□□□□□ -2.24
SOX4Q06945 MIR548AE1-201ENST00000583292 70 ntBASIC1.05□□□□□ -2.24
SOX4Q06945 AC021146.9-201ENST00000512503 156 ntBASIC1.04□□□□□ -2.24
SOX4Q06945 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.04□□□□□ -2.24
SOX4Q06945 SNORA36.2-201ENST00000384004 127 ntBASIC1.03□□□□□ -2.24
SOX4Q06945 RNA5SP299-201ENST00000391203 116 ntBASIC1.03□□□□□ -2.24
SOX4Q06945 MIR4752-201ENST00000579672 72 ntBASIC1.03□□□□□ -2.24
SOX4Q06945 SNORA70.25-201ENST00000612741 95 ntBASIC1.03□□□□□ -2.24
SOX4Q06945 RNY1P8-201ENST00000383970 114 ntBASIC1.02□□□□□ -2.25
SOX4Q06945 AL157398.1-201ENST00000452981 186 ntBASIC1.02□□□□□ -2.25
SOX4Q06945 Y_RNA.633-201ENST00000459107 95 ntBASIC1.02□□□□□ -2.25
SOX4Q06945 MIR4661-201ENST00000582720 75 ntBASIC1.02□□□□□ -2.25
SOX4Q06945 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC1.02□□□□□ -2.25
SOX4Q06945 RNA5SP517-201ENST00000364724 117 ntBASIC1.01□□□□□ -2.25
SOX4Q06945 SNORA15B-2-201ENST00000384058 135 ntBASIC1.01□□□□□ -2.25
SOX4Q06945 SNORA15B-1-201ENST00000384334 135 ntBASIC1.01□□□□□ -2.25
SOX4Q06945 MIR532-201ENST00000385025 91 ntBASIC1.01□□□□□ -2.25
SOX4Q06945 SNORA25.5-201ENST00000363782 126 ntBASIC1□□□□□ -2.25
SOX4Q06945 MIR548C-201ENST00000384815 97 ntBASIC1□□□□□ -2.25
SOX4Q06945 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC1□□□□□ -2.25
SOX4Q06945 MTND4LP19-201ENST00000403051 166 ntBASIC1□□□□□ -2.25
SOX4Q06945 SCARNA21.1-201ENST00000515996 128 ntBASIC1□□□□□ -2.25
SOX4Q06945 MIR6515-201ENST00000619843 57 ntBASIC1□□□□□ -2.25
SOX4Q06945 uc_338.10-201ENST00000621872 182 ntBASIC1□□□□□ -2.25
SOX4Q06945 SNORA63.6-201ENST00000364921 119 ntBASIC0.99□□□□□ -2.25
SOX4Q06945 MIR582-201ENST00000365731 98 ntBASIC0.99□□□□□ -2.25
SOX4Q06945 MIR4698-201ENST00000577795 80 ntBASIC0.99□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 257.7 ms