Protein–RNA interactions for Protein: P78539

SRPX, Sushi repeat-containing protein SRPX, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPXP78539 SNORA18.5-201ENST00000516616 101 ntBASIC-0.22□□□□□ -2.44
SRPXP78539 MIR20A-201ENST00000362279 71 ntBASIC-0.23□□□□□ -2.45
SRPXP78539 SNORD114-12-201ENST00000365400 75 ntBASIC-0.23□□□□□ -2.45
SRPXP78539 RNU6-1051P-201ENST00000365471 102 ntBASIC-0.23□□□□□ -2.45
SRPXP78539 MIR582-201ENST00000365731 98 ntBASIC-0.23□□□□□ -2.45
SRPXP78539 RNU6-46P-201ENST00000383860 107 ntBASIC-0.23□□□□□ -2.45
SRPXP78539 AL031737.1-201ENST00000450125 223 ntBASIC-0.23□□□□□ -2.45
SRPXP78539 MIR8064-201ENST00000612863 90 ntBASIC-0.23□□□□□ -2.45
SRPXP78539 RNA5SP98-201ENST00000363158 137 ntBASIC-0.24□□□□□ -2.45
SRPXP78539 RNA5SP275-201ENST00000363936 118 ntBASIC-0.24□□□□□ -2.45
SRPXP78539 SNORD49B-201ENST00000365172 72 ntBASIC-0.24□□□□□ -2.45
SRPXP78539 SNORA24B-201ENST00000384176 131 ntBASIC-0.24□□□□□ -2.45
SRPXP78539 MIR329-2-201ENST00000385029 84 ntBASIC-0.24□□□□□ -2.45
SRPXP78539 Y_RNA.629-201ENST00000411368 105 ntBASIC-0.24□□□□□ -2.45
SRPXP78539 AC096531.1-201ENST00000419107 107 ntBASIC-0.24□□□□□ -2.45
SRPXP78539 RNU6-320P-201ENST00000516511 106 ntBASIC-0.24□□□□□ -2.45
SRPXP78539 SNORA63.4-201ENST00000362763 126 ntBASIC-0.25□□□□□ -2.45
SRPXP78539 Y_RNA.544-201ENST00000384650 113 ntBASIC-0.25□□□□□ -2.45
SRPXP78539 SNORA49-201ENST00000386157 136 ntBASIC-0.25□□□□□ -2.45
SRPXP78539 MTATP8P2-201ENST00000435212 202 ntBASIC-0.25□□□□□ -2.45
SRPXP78539 AC244090.1-201ENST00000441884 93 ntBASIC-0.25□□□□□ -2.45
SRPXP78539 AC097510.1-201ENST00000510945 133 ntBASIC-0.25□□□□□ -2.45
SRPXP78539 IGLVI-20-201ENST00000519296 130 ntBASIC-0.25□□□□□ -2.45
SRPXP78539 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.25□□□□□ -2.45
SRPXP78539 SNORD114-28-201ENST00000363610 72 ntBASIC-0.26□□□□□ -2.45
SRPXP78539 Y_RNA.290-201ENST00000364879 114 ntBASIC-0.26□□□□□ -2.45
SRPXP78539 RNU6-1081P-201ENST00000384537 107 ntBASIC-0.26□□□□□ -2.45
SRPXP78539 SNORD20-201ENST00000384550 80 ntBASIC-0.26□□□□□ -2.45
SRPXP78539 MIR7-2-201ENST00000384970 110 ntBASIC-0.26□□□□□ -2.45
SRPXP78539 MIR548E-201ENST00000408287 88 ntBASIC-0.26□□□□□ -2.45
SRPXP78539 SNORD4A-201ENST00000459174 72 ntBASIC-0.26□□□□□ -2.45
SRPXP78539 RNA5SP285-201ENST00000516619 119 ntBASIC-0.26□□□□□ -2.45
SRPXP78539 MIR655-201ENST00000362159 97 ntBASIC-0.27□□□□□ -2.45
SRPXP78539 SNORA18.1-201ENST00000363418 128 ntBASIC-0.27□□□□□ -2.45
SRPXP78539 SNORA32.3-201ENST00000384772 121 ntBASIC-0.28□□□□□ -2.45
SRPXP78539 RNU6-1177P-201ENST00000391058 104 ntBASIC-0.28□□□□□ -2.45
SRPXP78539 AP000676.1-201ENST00000533307 52 ntBASIC-0.28□□□□□ -2.45
SRPXP78539 MIR4645-201ENST00000583158 77 ntBASIC-0.28□□□□□ -2.45
SRPXP78539 U2.22-201ENST00000636441 106 ntBASIC-0.28□□□□□ -2.45
SRPXP78539 RNU6-495P-201ENST00000362995 107 ntBASIC-0.29□□□□□ -2.46
SRPXP78539 RNA5SP257-201ENST00000363023 116 ntBASIC-0.29□□□□□ -2.46
SRPXP78539 RNU6-215P-201ENST00000365169 102 ntBASIC-0.29□□□□□ -2.46
SRPXP78539 RNU6-158P-201ENST00000517104 100 ntBASIC-0.29□□□□□ -2.46
SRPXP78539 MIR4802-201ENST00000581881 80 ntBASIC-0.29□□□□□ -2.46
SRPXP78539 SNORD114-4-201ENST00000363962 75 ntBASIC-0.3□□□□□ -2.46
SRPXP78539 RNU6-755P-201ENST00000364400 103 ntBASIC-0.3□□□□□ -2.46
SRPXP78539 SNORD115-27-201ENST00000364430 82 ntBASIC-0.3□□□□□ -2.46
SRPXP78539 RNU6-455P-201ENST00000384681 107 ntBASIC-0.3□□□□□ -2.46
SRPXP78539 Y_RNA.558-201ENST00000384685 113 ntBASIC-0.3□□□□□ -2.46
SRPXP78539 MTATP6P29-201ENST00000415057 132 ntBASIC-0.3□□□□□ -2.46
SRPXP78539 MIR4796-201ENST00000580742 81 ntBASIC-0.3□□□□□ -2.46
SRPXP78539 AP001180.6-201ENST00000584918 159 ntBASIC-0.3□□□□□ -2.46
SRPXP78539 AC145423.2-201ENST00000610631 239 ntBASIC-0.3□□□□□ -2.46
SRPXP78539 AP001318.4-201ENST00000616637 121 ntBASIC-0.3□□□□□ -2.46
SRPXP78539 RNU6-990P-201ENST00000364385 104 ntBASIC-0.31□□□□□ -2.46
SRPXP78539 RNY4P3-201ENST00000365254 95 ntBASIC-0.31□□□□□ -2.46
SRPXP78539 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.31□□□□□ -2.46
SRPXP78539 snoU13.17-201ENST00000458802 104 ntBASIC-0.31□□□□□ -2.46
SRPXP78539 RNU7-153P-201ENST00000516455 62 ntBASIC-0.31□□□□□ -2.46
SRPXP78539 MIR548AZ-201ENST00000616567 95 ntBASIC-0.31□□□□□ -2.46
SRPXP78539 uc_338.36-201ENST00000622331 158 ntBASIC-0.31□□□□□ -2.46
SRPXP78539 SNORD14C-201ENST00000365382 88 ntBASIC-0.32□□□□□ -2.46
SRPXP78539 MIR196A2-201ENST00000385189 110 ntBASIC-0.32□□□□□ -2.46
SRPXP78539 SNORD75.1-201ENST00000408373 60 ntBASIC-0.32□□□□□ -2.46
SRPXP78539 MIR5589-201ENST00000579442 60 ntBASIC-0.32□□□□□ -2.46
SRPXP78539 MIR3666-201ENST00000607845 111 ntBASIC-0.32□□□□□ -2.46
SRPXP78539 SNORD115-25-201ENST00000362619 82 ntBASIC-0.33□□□□□ -2.46
SRPXP78539 RNA5SP368-201ENST00000364298 116 ntBASIC-0.33□□□□□ -2.46
SRPXP78539 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-0.33□□□□□ -2.46
SRPXP78539 MIR1236-201ENST00000408340 102 ntBASIC-0.33□□□□□ -2.46
SRPXP78539 SNORD75.2-201ENST00000408784 58 ntBASIC-0.33□□□□□ -2.46
SRPXP78539 RPS29P8-201ENST00000445109 171 ntBASIC-0.33□□□□□ -2.46
SRPXP78539 SNORD126-201ENST00000459475 77 ntBASIC-0.33□□□□□ -2.46
SRPXP78539 RNU6-919P-201ENST00000516731 104 ntBASIC-0.33□□□□□ -2.46
SRPXP78539 RNU5F-1-201ENST00000362507 117 ntBASIC-0.34□□□□□ -2.46
SRPXP78539 RNU6-824P-201ENST00000363724 104 ntBASIC-0.34□□□□□ -2.46
SRPXP78539 RNU6-382P-201ENST00000365181 106 ntBASIC-0.34□□□□□ -2.46
SRPXP78539 Y_RNA.348-201ENST00000365403 103 ntBASIC-0.34□□□□□ -2.46
SRPXP78539 RNU6-147P-201ENST00000383983 107 ntBASIC-0.34□□□□□ -2.46
SRPXP78539 MIR9-2-201ENST00000384838 87 ntBASIC-0.34□□□□□ -2.46
SRPXP78539 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.34□□□□□ -2.46
SRPXP78539 MIR2052-201ENST00000636055 55 ntBASIC-0.34□□□□□ -2.46
SRPXP78539 MIR6759-201ENST00000638110 65 ntBASIC-0.34□□□□□ -2.46
SRPXP78539 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.34□□□□□ -2.46
SRPXP78539 Y_RNA.291-201ENST00000364886 113 ntBASIC-0.35□□□□□ -2.47
SRPXP78539 RNU6-44P-201ENST00000384045 107 ntBASIC-0.35□□□□□ -2.47
SRPXP78539 AL035461.1-201ENST00000421490 332 ntBASIC-0.35□□□□□ -2.47
SRPXP78539 SNORA40.13-201ENST00000516379 120 ntBASIC-0.35□□□□□ -2.47
SRPXP78539 MIR4636-201ENST00000582271 80 ntBASIC-0.35□□□□□ -2.47
SRPXP78539 AL590491.3-201ENST00000610731 82 ntBASIC-0.35□□□□□ -2.47
SRPXP78539 MALAT1.1-201ENST00000618249 95 ntBASIC-0.35□□□□□ -2.47
SRPXP78539 AL391099.1-201ENST00000624635 187 ntBASIC-0.35□□□□□ -2.47
SRPXP78539 MIR4773-1-201ENST00000637203 78 ntBASIC-0.35□□□□□ -2.47
SRPXP78539 MIR4788-201ENST00000639104 80 ntBASIC-0.35□□□□□ -2.47
SRPXP78539 MIR101-1-201ENST00000362265 75 ntBASIC-0.36□□□□□ -2.47
SRPXP78539 RNA5SP300-201ENST00000391197 107 ntBASIC-0.36□□□□□ -2.47
SRPXP78539 RNU7-24P-201ENST00000458867 62 ntBASIC-0.36□□□□□ -2.47
SRPXP78539 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.36□□□□□ -2.47
SRPXP78539 MIR548AI-201ENST00000579940 88 ntBASIC-0.36□□□□□ -2.47
SRPXP78539 RNU6-640P-201ENST00000363693 105 ntBASIC-0.37□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 7.9 ms