Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 MTND3P10-201ENST00000450967 341 ntBASIC-1.87□□□□□ -2.71
PRKDCP78527 DLEU2_1.1-201ENST00000612089 120 ntBASIC-1.87□□□□□ -2.71
PRKDCP78527 SNORD60-201ENST00000383903 83 ntBASIC-1.88□□□□□ -2.71
PRKDCP78527 AC013734.1-201ENST00000619329 111 ntBASIC-1.88□□□□□ -2.71
PRKDCP78527 RNU6-1042P-201ENST00000384204 107 ntBASIC-1.88□□□□□ -2.71
PRKDCP78527 Y_RNA.541-201ENST00000384640 113 ntBASIC-1.88□□□□□ -2.71
PRKDCP78527 MIR548C-201ENST00000384815 97 ntBASIC-1.88□□□□□ -2.71
PRKDCP78527 MTND1P19-201ENST00000511780 315 ntBASIC-1.88□□□□□ -2.71
PRKDCP78527 Y_RNA.581-201ENST00000391017 97 ntBASIC-1.88□□□□□ -2.71
PRKDCP78527 RN7SKP298-201ENST00000515950 94 ntBASIC-1.88□□□□□ -2.71
PRKDCP78527 AC002553.4-201ENST00000616896 331 ntBASIC-1.88□□□□□ -2.71
PRKDCP78527 Y_RNA.41-201ENST00000362646 102 ntBASIC-1.89□□□□□ -2.71
PRKDCP78527 SNORD115-37-201ENST00000363768 82 ntBASIC-1.89□□□□□ -2.71
PRKDCP78527 RNU7-125P-201ENST00000458760 62 ntBASIC-1.89□□□□□ -2.71
PRKDCP78527 RPS29P30-201ENST00000600975 111 ntBASIC-1.89□□□□□ -2.71
PRKDCP78527 U2.1-201ENST00000618978 145 ntBASIC-1.89□□□□□ -2.71
PRKDCP78527 RNU6-1188P-201ENST00000363795 107 ntBASIC-1.89□□□□□ -2.71
PRKDCP78527 SNORD115-31-201ENST00000365318 82 ntBASIC-1.89□□□□□ -2.71
PRKDCP78527 MIR513B-201ENST00000385136 84 ntBASIC-1.89□□□□□ -2.71
PRKDCP78527 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-1.89□□□□□ -2.71
PRKDCP78527 SNORD116-1-201ENST00000384335 95 ntBASIC-1.89□□□□□ -2.71
PRKDCP78527 RNU6-656P-201ENST00000516785 107 ntBASIC-1.89□□□□□ -2.71
PRKDCP78527 MIR3170-201ENST00000582699 77 ntBASIC-1.89□□□□□ -2.71
PRKDCP78527 DEFB108C-201ENST00000400154 252 ntBASIC-1.9□□□□□ -2.71
PRKDCP78527 RNU6-976P-201ENST00000516086 111 ntBASIC-1.9□□□□□ -2.71
PRKDCP78527 AC107308.1-201ENST00000615897 301 ntBASIC-1.9□□□□□ -2.71
PRKDCP78527 Y_RNA.155-201ENST00000363632 101 ntBASIC-1.9□□□□□ -2.71
PRKDCP78527 MIR548V-201ENST00000584165 80 ntBASIC-1.9□□□□□ -2.71
PRKDCP78527 AC025166.1-201ENST00000612411 163 ntBASIC-1.9□□□□□ -2.71
PRKDCP78527 DLEU2_3.2-201ENST00000612883 73 ntBASIC-1.9□□□□□ -2.71
PRKDCP78527 RNU6-937P-201ENST00000384325 106 ntBASIC-1.9□□□□□ -2.71
PRKDCP78527 RNU6-1215P-201ENST00000384441 102 ntBASIC-1.9□□□□□ -2.71
PRKDCP78527 RNY4P20-201ENST00000516678 93 ntBASIC-1.9□□□□□ -2.71
PRKDCP78527 RNU6-451P-201ENST00000362921 107 ntBASIC-1.91□□□□□ -2.71
PRKDCP78527 Y_RNA.154-201ENST00000363624 102 ntBASIC-1.91□□□□□ -2.72
PRKDCP78527 SNORA24B-201ENST00000384176 131 ntBASIC-1.91□□□□□ -2.72
PRKDCP78527 AL445567.1-201ENST00000439121 144 ntBASIC-1.91□□□□□ -2.72
PRKDCP78527 SNORD81.2-201ENST00000365153 76 ntBASIC-1.91□□□□□ -2.72
PRKDCP78527 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-1.91□□□□□ -2.72
PRKDCP78527 AC090574.1-201ENST00000623186 233 ntBASIC-1.91□□□□□ -2.72
PRKDCP78527 Y_RNA.198-201ENST00000364013 98 ntBASIC-1.92□□□□□ -2.72
PRKDCP78527 RNU6-645P-201ENST00000364649 106 ntBASIC-1.92□□□□□ -2.72
PRKDCP78527 Y_RNA.467-201ENST00000384297 102 ntBASIC-1.92□□□□□ -2.72
PRKDCP78527 Y_RNA.594-201ENST00000410373 140 ntBASIC-1.92□□□□□ -2.72
PRKDCP78527 SNORD11.1-201ENST00000459482 85 ntBASIC-1.92□□□□□ -2.72
PRKDCP78527 RNU6-669P-201ENST00000365575 107 ntBASIC-1.92□□□□□ -2.72
PRKDCP78527 MT-TI-201ENST00000387365 69 ntBASIC-1.92□□□□□ -2.72
PRKDCP78527 Y_RNA.612-201ENST00000410717 95 ntBASIC-1.92□□□□□ -2.72
PRKDCP78527 RNU6-1148P-201ENST00000410992 104 ntBASIC-1.92□□□□□ -2.72
PRKDCP78527 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.92□□□□□ -2.72
PRKDCP78527 AC092794.1-201ENST00000612734 582 ntBASIC-1.92□□□□□ -2.72
PRKDCP78527 Y_RNA.409-201ENST00000383990 98 ntBASIC-1.93□□□□□ -2.72
PRKDCP78527 Y_RNA.590-201ENST00000410140 107 ntBASIC-1.93□□□□□ -2.72
PRKDCP78527 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC-1.93□□□□□ -2.72
PRKDCP78527 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.93□□□□□ -2.72
PRKDCP78527 SNORA18.5-201ENST00000516616 101 ntBASIC-1.93□□□□□ -2.72
PRKDCP78527 Y_RNA.163-201ENST00000363702 113 ntBASIC-1.93□□□□□ -2.72
PRKDCP78527 RNU6-106P-201ENST00000384405 107 ntBASIC-1.93□□□□□ -2.72
PRKDCP78527 RNU6-561P-201ENST00000516222 102 ntBASIC-1.93□□□□□ -2.72
PRKDCP78527 RNU7-174P-201ENST00000516248 59 ntBASIC-1.93□□□□□ -2.72
PRKDCP78527 SNORD113-6-201ENST00000363345 75 ntBASIC-1.93□□□□□ -2.72
PRKDCP78527 RNU6-835P-201ENST00000516974 104 ntBASIC-1.93□□□□□ -2.72
PRKDCP78527 MIR3149-201ENST00000584629 83 ntBASIC-1.94□□□□□ -2.72
PRKDCP78527 RNU6-314P-201ENST00000516574 104 ntBASIC-1.94□□□□□ -2.72
PRKDCP78527 Y_RNA.690-201ENST00000516603 95 ntBASIC-1.94□□□□□ -2.72
PRKDCP78527 RNU6-326P-201ENST00000365480 107 ntBASIC-1.94□□□□□ -2.72
PRKDCP78527 RNU6-1143P-201ENST00000516125 104 ntBASIC-1.94□□□□□ -2.72
PRKDCP78527 AC024614.3-201ENST00000637860 256 ntBASIC-1.94□□□□□ -2.72
PRKDCP78527 SNORD115-46-201ENST00000390982 71 ntBASIC-1.95□□□□□ -2.72
PRKDCP78527 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC-1.95□□□□□ -2.72
PRKDCP78527 RNU7-160P-201ENST00000516660 62 ntBASIC-1.95□□□□□ -2.72
PRKDCP78527 RNU6-699P-201ENST00000517081 110 ntBASIC-1.95□□□□□ -2.72
PRKDCP78527 U4.4-201ENST00000620626 117 ntBASIC-1.95□□□□□ -2.72
PRKDCP78527 RNU6-828P-201ENST00000364876 107 ntBASIC-1.95□□□□□ -2.72
PRKDCP78527 AL731768.1-201ENST00000603124 139 ntBASIC-1.95□□□□□ -2.72
PRKDCP78527 MIR548N-201ENST00000408742 75 ntBASIC-1.95□□□□□ -2.72
PRKDCP78527 RNU6-290P-201ENST00000365212 101 ntBASIC-1.96□□□□□ -2.72
PRKDCP78527 Y_RNA.275-201ENST00000364726 110 ntBASIC-1.96□□□□□ -2.72
PRKDCP78527 Y_RNA.629-201ENST00000411368 105 ntBASIC-1.96□□□□□ -2.72
PRKDCP78527 AC009094.1-201ENST00000564443 426 ntBASIC-1.96□□□□□ -2.72
PRKDCP78527 Y_RNA.158-201ENST00000363651 101 ntBASIC-1.96□□□□□ -2.72
PRKDCP78527 SNORD113-2-201ENST00000391082 72 ntBASIC-1.96□□□□□ -2.72
PRKDCP78527 AC096644.2-201ENST00000429278 159 ntBASIC-1.96□□□□□ -2.72
PRKDCP78527 RNU6-361P-201ENST00000364454 107 ntBASIC-1.97□□□□□ -2.72
PRKDCP78527 Y_RNA.359-201ENST00000365498 102 ntBASIC-1.97□□□□□ -2.72
PRKDCP78527 RNU6-834P-201ENST00000362367 110 ntBASIC-1.97□□□□□ -2.72
PRKDCP78527 Y_RNA.573-201ENST00000384763 105 ntBASIC-1.97□□□□□ -2.72
PRKDCP78527 AC130289.1-201ENST00000577321 73 ntBASIC-1.97□□□□□ -2.72
PRKDCP78527 MIR4272-201ENST00000635924 64 ntBASIC-1.97□□□□□ -2.72
PRKDCP78527 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-1.97□□□□□ -2.73
PRKDCP78527 AC113139.1-201ENST00000605049 239 ntBASIC-1.97□□□□□ -2.73
PRKDCP78527 Y_RNA.693-201ENST00000516641 110 ntBASIC-1.98□□□□□ -2.73
PRKDCP78527 Y_RNA.213-201ENST00000364178 111 ntBASIC-1.98□□□□□ -2.73
PRKDCP78527 MIR630-201ENST00000384957 97 ntBASIC-1.98□□□□□ -2.73
PRKDCP78527 MIR577-201ENST00000385196 96 ntBASIC-1.98□□□□□ -2.73
PRKDCP78527 MIR3121-201ENST00000579680 77 ntBASIC-1.98□□□□□ -2.73
PRKDCP78527 Y_RNA.773-201ENST00000607168 90 ntBASIC-1.98□□□□□ -2.73
PRKDCP78527 SNORD113-3-201ENST00000364830 72 ntBASIC-1.99□□□□□ -2.73
PRKDCP78527 MIR369-201ENST00000362155 70 ntBASIC-1.99□□□□□ -2.73
PRKDCP78527 RNU6-1313P-201ENST00000362622 102 ntBASIC-1.99□□□□□ -2.73
Retrieved 100 of 98,524 protein–RNA pairs in 208.7 ms