Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.66□□□□□ -2.68
ACTBP60709 MIR1263-201ENST00000408324 86 ntBASIC-1.66□□□□□ -2.68
ACTBP60709 AP002795.1-201ENST00000534879 84 ntBASIC-1.66□□□□□ -2.68
ACTBP60709 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.67□□□□□ -2.68
ACTBP60709 RNY4P6-201ENST00000363667 96 ntBASIC-1.67□□□□□ -2.68
ACTBP60709 Y_RNA.163-201ENST00000363702 113 ntBASIC-1.67□□□□□ -2.68
ACTBP60709 RNU6-1014P-201ENST00000383940 103 ntBASIC-1.67□□□□□ -2.68
ACTBP60709 Y_RNA.478-201ENST00000384358 107 ntBASIC-1.67□□□□□ -2.68
ACTBP60709 RNU6-816P-201ENST00000390914 107 ntBASIC-1.67□□□□□ -2.68
ACTBP60709 RNU6-1268P-201ENST00000391214 107 ntBASIC-1.67□□□□□ -2.68
ACTBP60709 RNU6-1239P-201ENST00000391310 107 ntBASIC-1.67□□□□□ -2.68
ACTBP60709 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.67□□□□□ -2.68
ACTBP60709 CYP3A54P-201ENST00000566950 75 ntBASIC-1.67□□□□□ -2.68
ACTBP60709 MIR3064-201ENST00000581130 66 ntBASIC-1.67□□□□□ -2.68
ACTBP60709 RNU6-226P-201ENST00000363778 107 ntBASIC-1.68□□□□□ -2.68
ACTBP60709 RNU6-915P-201ENST00000364943 103 ntBASIC-1.68□□□□□ -2.68
ACTBP60709 Y_RNA.528-201ENST00000384575 108 ntBASIC-1.68□□□□□ -2.68
ACTBP60709 MIR548U-201ENST00000390728 81 ntBASIC-1.68□□□□□ -2.68
ACTBP60709 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.68□□□□□ -2.68
ACTBP60709 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.68□□□□□ -2.68
ACTBP60709 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.68□□□□□ -2.68
ACTBP60709 MIR1246-201ENST00000636535 73 ntBASIC-1.68□□□□□ -2.68
ACTBP60709 SNORA2.1-201ENST00000363089 137 ntBASIC-1.69□□□□□ -2.68
ACTBP60709 MIR507-201ENST00000385234 94 ntBASIC-1.69□□□□□ -2.68
ACTBP60709 AL353691.2-201ENST00000443795 59 ntBASIC-1.69□□□□□ -2.68
ACTBP60709 Y_RNA.720-201ENST00000517166 92 ntBASIC-1.69□□□□□ -2.68
ACTBP60709 AL513043.2-201ENST00000573941 143 ntBASIC-1.69□□□□□ -2.68
ACTBP60709 MIR4801-201ENST00000582704 82 ntBASIC-1.69□□□□□ -2.68
ACTBP60709 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.7□□□□□ -2.68
ACTBP60709 RNU6-260P-201ENST00000384092 107 ntBASIC-1.7□□□□□ -2.68
ACTBP60709 RNU6-80P-201ENST00000384195 107 ntBASIC-1.7□□□□□ -2.68
ACTBP60709 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.7□□□□□ -2.68
ACTBP60709 MIR577-201ENST00000385196 96 ntBASIC-1.7□□□□□ -2.68
ACTBP60709 SNORD90-201ENST00000391145 111 ntBASIC-1.7□□□□□ -2.68
ACTBP60709 RNU6-460P-201ENST00000391158 108 ntBASIC-1.7□□□□□ -2.68
ACTBP60709 RNU6-412P-201ENST00000516434 106 ntBASIC-1.7□□□□□ -2.68
ACTBP60709 RNA5SP147-201ENST00000516493 109 ntBASIC-1.7□□□□□ -2.68
ACTBP60709 RNY4P27-201ENST00000363341 96 ntBASIC-1.71□□□□□ -2.68
ACTBP60709 AC104996.3-201ENST00000590718 94 ntBASIC-1.71□□□□□ -2.68
ACTBP60709 RNU6-774P-201ENST00000363238 107 ntBASIC-1.72□□□□□ -2.68
ACTBP60709 RNU6-382P-201ENST00000365181 106 ntBASIC-1.72□□□□□ -2.68
ACTBP60709 RNU4-11P-201ENST00000365287 132 ntBASIC-1.72□□□□□ -2.68
ACTBP60709 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.72□□□□□ -2.68
ACTBP60709 SNORD19-201ENST00000391191 68 ntBASIC-1.72□□□□□ -2.68
ACTBP60709 RNU6-1064P-201ENST00000410626 104 ntBASIC-1.72□□□□□ -2.68
ACTBP60709 RNU6-1135P-201ENST00000411083 103 ntBASIC-1.72□□□□□ -2.68
ACTBP60709 SNORA81.3-201ENST00000517283 198 ntBASIC-1.72□□□□□ -2.68
ACTBP60709 MIR4694-201ENST00000578534 80 ntBASIC-1.72□□□□□ -2.68
ACTBP60709 Y_RNA.200-201ENST00000364018 102 ntBASIC-1.73□□□□□ -2.69
ACTBP60709 RNU6-151P-201ENST00000364158 107 ntBASIC-1.73□□□□□ -2.69
ACTBP60709 MIR519A2-201ENST00000384990 87 ntBASIC-1.73□□□□□ -2.69
ACTBP60709 AL078595.1-201ENST00000404458 226 ntBASIC-1.73□□□□□ -2.69
ACTBP60709 AC022559.1-201ENST00000520905 205 ntBASIC-1.73□□□□□ -2.69
ACTBP60709 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.74□□□□□ -2.69
ACTBP60709 Y_RNA.491-201ENST00000384417 107 ntBASIC-1.74□□□□□ -2.69
ACTBP60709 MIR203A-201ENST00000384836 110 ntBASIC-1.74□□□□□ -2.69
ACTBP60709 RNA5SP86-201ENST00000390869 98 ntBASIC-1.74□□□□□ -2.69
ACTBP60709 RNU6-1333P-201ENST00000516162 93 ntBASIC-1.74□□□□□ -2.69
ACTBP60709 RNU7-154P-201ENST00000516194 62 ntBASIC-1.74□□□□□ -2.69
ACTBP60709 RNU6-62P-201ENST00000516526 102 ntBASIC-1.74□□□□□ -2.69
ACTBP60709 AL117187.1-201ENST00000555482 181 ntBASIC-1.74□□□□□ -2.69
ACTBP60709 MIR4439-201ENST00000583746 80 ntBASIC-1.74□□□□□ -2.69
ACTBP60709 Y_RNA.350-201ENST00000365409 98 ntBASIC-1.75□□□□□ -2.69
ACTBP60709 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.75□□□□□ -2.69
ACTBP60709 AC090616.4-201ENST00000448026 115 ntBASIC-1.75□□□□□ -2.69
ACTBP60709 RNU6-732P-201ENST00000516033 103 ntBASIC-1.75□□□□□ -2.69
ACTBP60709 Y_RNA.668-201ENST00000516233 93 ntBASIC-1.75□□□□□ -2.69
ACTBP60709 RNU6-781P-201ENST00000516377 101 ntBASIC-1.75□□□□□ -2.69
ACTBP60709 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.75□□□□□ -2.69
ACTBP60709 MIR548AG1-201ENST00000579932 66 ntBASIC-1.75□□□□□ -2.69
ACTBP60709 AP001340.1-201ENST00000624405 217 ntBASIC-1.75□□□□□ -2.69
ACTBP60709 Y_RNA.47-201ENST00000362697 108 ntBASIC-1.76□□□□□ -2.69
ACTBP60709 RNU6-832P-201ENST00000363319 107 ntBASIC-1.76□□□□□ -2.69
ACTBP60709 Y_RNA.422-201ENST00000384054 114 ntBASIC-1.76□□□□□ -2.69
ACTBP60709 Y_RNA.558-201ENST00000384685 113 ntBASIC-1.76□□□□□ -2.69
ACTBP60709 AL158147.1-201ENST00000443970 75 ntBASIC-1.76□□□□□ -2.69
ACTBP60709 SNORD4B-201ENST00000459083 72 ntBASIC-1.76□□□□□ -2.69
ACTBP60709 RNU6-111P-201ENST00000517179 105 ntBASIC-1.76□□□□□ -2.69
ACTBP60709 MIR3657-201ENST00000584818 117 ntBASIC-1.76□□□□□ -2.69
ACTBP60709 AC006254.2-201ENST00000603259 279 ntBASIC-1.76□□□□□ -2.69
ACTBP60709 AC072026.1-201ENST00000605023 201 ntBASIC-1.76□□□□□ -2.69
ACTBP60709 AC141273.2-201ENST00000618989 130 ntBASIC-1.76□□□□□ -2.69
ACTBP60709 Y_RNA.61-201ENST00000362835 102 ntBASIC-1.77□□□□□ -2.69
ACTBP60709 Y_RNA.240-201ENST00000364469 95 ntBASIC-1.77□□□□□ -2.69
ACTBP60709 RNU6-644P-201ENST00000391155 98 ntBASIC-1.77□□□□□ -2.69
ACTBP60709 Y_RNA.674-201ENST00000516362 113 ntBASIC-1.77□□□□□ -2.69
ACTBP60709 RNU6-1153P-201ENST00000516760 105 ntBASIC-1.77□□□□□ -2.69
ACTBP60709 MIR3128-201ENST00000581957 66 ntBASIC-1.77□□□□□ -2.69
ACTBP60709 RNU6-824P-201ENST00000363724 104 ntBASIC-1.78□□□□□ -2.69
ACTBP60709 Y_RNA.188-201ENST00000363952 111 ntBASIC-1.78□□□□□ -2.69
ACTBP60709 RNA5SP292-201ENST00000390974 118 ntBASIC-1.78□□□□□ -2.69
ACTBP60709 RPL35AP4-201ENST00000412007 102 ntBASIC-1.78□□□□□ -2.69
ACTBP60709 RNU6-1023P-201ENST00000516137 106 ntBASIC-1.78□□□□□ -2.69
ACTBP60709 RNU6-168P-201ENST00000516189 101 ntBASIC-1.78□□□□□ -2.69
ACTBP60709 Y_RNA.680-201ENST00000516441 93 ntBASIC-1.78□□□□□ -2.69
ACTBP60709 MIR5683-201ENST00000636514 76 ntBASIC-1.78□□□□□ -2.69
ACTBP60709 RNU6-246P-201ENST00000384702 107 ntBASIC-1.79□□□□□ -2.7
ACTBP60709 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-1.79□□□□□ -2.7
ACTBP60709 MIR6509-201ENST00000614603 85 ntBASIC-1.79□□□□□ -2.7
ACTBP60709 RNY3P2-201ENST00000362918 102 ntBASIC-1.8□□□□□ -2.7
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms