Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 RNU1-141P-201ENST00000364623 158 ntBASIC1.17□□□□□ -2.22
ERVFC1P60507 RNU6-260P-201ENST00000384092 107 ntBASIC1.17□□□□□ -2.22
ERVFC1P60507 SNORA8.2-201ENST00000384372 139 ntBASIC1.17□□□□□ -2.22
ERVFC1P60507 MIR598-201ENST00000384868 97 ntBASIC1.17□□□□□ -2.22
ERVFC1P60507 SNORD124-201ENST00000459577 104 ntBASIC1.17□□□□□ -2.22
ERVFC1P60507 MIR3612-201ENST00000579753 87 ntBASIC1.17□□□□□ -2.22
ERVFC1P60507 MIR3657-201ENST00000584818 117 ntBASIC1.17□□□□□ -2.22
ERVFC1P60507 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.17□□□□□ -2.22
ERVFC1P60507 MIR373-201ENST00000362273 69 ntBASIC1.16□□□□□ -2.22
ERVFC1P60507 RNU6-669P-201ENST00000365575 107 ntBASIC1.16□□□□□ -2.22
ERVFC1P60507 MTND4LP1-201ENST00000446263 157 ntBASIC1.16□□□□□ -2.22
ERVFC1P60507 RNU6-982P-201ENST00000516216 102 ntBASIC1.16□□□□□ -2.22
ERVFC1P60507 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.16□□□□□ -2.22
ERVFC1P60507 SNORA2.1-201ENST00000363089 137 ntBASIC1.15□□□□□ -2.23
ERVFC1P60507 SNORD114-24-201ENST00000365029 72 ntBASIC1.15□□□□□ -2.23
ERVFC1P60507 MIR548L-201ENST00000408303 86 ntBASIC1.15□□□□□ -2.23
ERVFC1P60507 RNA5SP404-201ENST00000517118 132 ntBASIC1.15□□□□□ -2.23
ERVFC1P60507 MIR4460-201ENST00000577862 86 ntBASIC1.15□□□□□ -2.23
ERVFC1P60507 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
ERVFC1P60507 RNU6-269P-201ENST00000391077 97 ntBASIC1.14□□□□□ -2.23
ERVFC1P60507 RNA5SP255-201ENST00000516370 107 ntBASIC1.14□□□□□ -2.23
ERVFC1P60507 AC069503.3-201ENST00000618674 145 ntBASIC1.14□□□□□ -2.23
ERVFC1P60507 AL162376.1-201ENST00000624117 175 ntBASIC1.14□□□□□ -2.23
ERVFC1P60507 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.14□□□□□ -2.23
ERVFC1P60507 RNA5SP325-201ENST00000363756 130 ntBASIC1.13□□□□□ -2.23
ERVFC1P60507 SNORD114-4-201ENST00000363962 75 ntBASIC1.13□□□□□ -2.23
ERVFC1P60507 RNU6-1335P-201ENST00000365426 107 ntBASIC1.13□□□□□ -2.23
ERVFC1P60507 MIR203A-201ENST00000384836 110 ntBASIC1.13□□□□□ -2.23
ERVFC1P60507 AC110620.1-201ENST00000416042 228 ntBASIC1.13□□□□□ -2.23
ERVFC1P60507 OR2A41P-201ENST00000473586 105 ntBASIC1.13□□□□□ -2.23
ERVFC1P60507 SNORA40.17-201ENST00000517256 115 ntBASIC1.13□□□□□ -2.23
ERVFC1P60507 SNORD114-21-201ENST00000606412 72 ntBASIC1.13□□□□□ -2.23
ERVFC1P60507 RNU4-45P-201ENST00000365469 141 ntBASIC1.12□□□□□ -2.23
ERVFC1P60507 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.12□□□□□ -2.23
ERVFC1P60507 MIR6739-201ENST00000622461 75 ntBASIC1.12□□□□□ -2.23
ERVFC1P60507 RNU6-668P-201ENST00000364180 107 ntBASIC1.11□□□□□ -2.23
ERVFC1P60507 Y_RNA.250-201ENST00000364542 110 ntBASIC1.11□□□□□ -2.23
ERVFC1P60507 RNU6-1187P-201ENST00000364771 110 ntBASIC1.11□□□□□ -2.23
ERVFC1P60507 RNU6-716P-201ENST00000365621 103 ntBASIC1.11□□□□□ -2.23
ERVFC1P60507 Y_RNA.375-201ENST00000365625 101 ntBASIC1.11□□□□□ -2.23
ERVFC1P60507 MIR9-2-201ENST00000384838 87 ntBASIC1.11□□□□□ -2.23
ERVFC1P60507 RNU6-645P-201ENST00000364649 106 ntBASIC1.1□□□□□ -2.23
ERVFC1P60507 RNU6-542P-201ENST00000516405 103 ntBASIC1.1□□□□□ -2.23
ERVFC1P60507 MIR3973-201ENST00000579824 107 ntBASIC1.1□□□□□ -2.23
ERVFC1P60507 MIR18A-201ENST00000362310 71 ntBASIC1.09□□□□□ -2.23
ERVFC1P60507 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.09□□□□□ -2.23
ERVFC1P60507 MIR5000-201ENST00000577717 103 ntBASIC1.09□□□□□ -2.23
ERVFC1P60507 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.09□□□□□ -2.24
ERVFC1P60507 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.24
ERVFC1P60507 RNA5SP484-201ENST00000458857 111 ntBASIC1.08□□□□□ -2.24
ERVFC1P60507 AC211469.2-201ENST00000605461 205 ntBASIC1.08□□□□□ -2.24
ERVFC1P60507 AL109933.3-201ENST00000619095 188 ntBASIC1.08□□□□□ -2.24
ERVFC1P60507 RNU6-990P-201ENST00000364385 104 ntBASIC1.07□□□□□ -2.24
ERVFC1P60507 RNU4-38P-201ENST00000364472 129 ntBASIC1.07□□□□□ -2.24
ERVFC1P60507 RNU6-499P-201ENST00000365615 107 ntBASIC1.07□□□□□ -2.24
ERVFC1P60507 RNU6-656P-201ENST00000516785 107 ntBASIC1.07□□□□□ -2.24
ERVFC1P60507 AC018659.1-201ENST00000551083 169 ntBASIC1.07□□□□□ -2.24
ERVFC1P60507 SNORA36.1-201ENST00000363424 132 ntBASIC1.06□□□□□ -2.24
ERVFC1P60507 RNA5SP215-201ENST00000363440 122 ntBASIC1.06□□□□□ -2.24
ERVFC1P60507 MIR1285-1-201ENST00000408593 84 ntBASIC1.06□□□□□ -2.24
ERVFC1P60507 SNORD99-201ENST00000408612 74 ntBASIC1.06□□□□□ -2.24
ERVFC1P60507 RNU5B-6P-201ENST00000516765 68 ntBASIC1.05□□□□□ -2.24
ERVFC1P60507 CYP3A137P-201ENST00000562436 69 ntBASIC1.05□□□□□ -2.24
ERVFC1P60507 RNA5SP227-201ENST00000516184 113 ntBASIC1.04□□□□□ -2.24
ERVFC1P60507 RNA5SP268-201ENST00000516828 124 ntBASIC1.04□□□□□ -2.24
ERVFC1P60507 AC011195.1-201ENST00000578177 177 ntBASIC1.04□□□□□ -2.24
ERVFC1P60507 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.04□□□□□ -2.24
ERVFC1P60507 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
ERVFC1P60507 MIR532-201ENST00000385025 91 ntBASIC1.03□□□□□ -2.24
ERVFC1P60507 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
ERVFC1P60507 RNA5SP94-201ENST00000516917 108 ntBASIC1.03□□□□□ -2.24
ERVFC1P60507 RNU6-1162P-201ENST00000384443 104 ntBASIC1.02□□□□□ -2.25
ERVFC1P60507 MIR521-2-201ENST00000384818 87 ntBASIC1.02□□□□□ -2.25
ERVFC1P60507 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.02□□□□□ -2.25
ERVFC1P60507 MIR4661-201ENST00000582720 75 ntBASIC1.02□□□□□ -2.25
ERVFC1P60507 MIR6857-201ENST00000613267 93 ntBASIC1.02□□□□□ -2.25
ERVFC1P60507 Y_RNA.407-201ENST00000383986 113 ntBASIC1.01□□□□□ -2.25
ERVFC1P60507 Y_RNA.633-201ENST00000459107 95 ntBASIC1.01□□□□□ -2.25
ERVFC1P60507 RNU6-1089P-201ENST00000516473 104 ntBASIC1.01□□□□□ -2.25
ERVFC1P60507 RNA5SP147-201ENST00000516493 109 ntBASIC1.01□□□□□ -2.25
ERVFC1P60507 MIR4698-201ENST00000577795 80 ntBASIC1.01□□□□□ -2.25
ERVFC1P60507 AC092634.7-201ENST00000621022 103 ntBASIC1.01□□□□□ -2.25
ERVFC1P60507 SNORA15B-2-201ENST00000384058 135 ntBASIC1□□□□□ -2.25
ERVFC1P60507 SNORA15B-1-201ENST00000384334 135 ntBASIC1□□□□□ -2.25
ERVFC1P60507 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1□□□□□ -2.25
ERVFC1P60507 SCARNA17.3-201ENST00000516381 125 ntBASIC1□□□□□ -2.25
ERVFC1P60507 AL353765.1-201ENST00000605514 183 ntBASIC1□□□□□ -2.25
ERVFC1P60507 MIR7107-201ENST00000611489 80 ntBASIC1□□□□□ -2.25
ERVFC1P60507 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1□□□□□ -2.25
ERVFC1P60507 Y_RNA.374-201ENST00000365606 101 ntBASIC0.99□□□□□ -2.25
ERVFC1P60507 SCARNA21.1-201ENST00000515996 128 ntBASIC0.99□□□□□ -2.25
ERVFC1P60507 RN7SL793P-201ENST00000583259 296 ntBASIC0.99□□□□□ -2.25
ERVFC1P60507 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.99□□□□□ -2.25
ERVFC1P60507 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
ERVFC1P60507 SNORA25.5-201ENST00000363782 126 ntBASIC0.98□□□□□ -2.25
ERVFC1P60507 SNORD110-201ENST00000408189 75 ntBASIC0.98□□□□□ -2.25
ERVFC1P60507 AC006210.1-201ENST00000424882 111 ntBASIC0.98□□□□□ -2.25
ERVFC1P60507 MIR652-201ENST00000385278 98 ntBASIC0.97□□□□□ -2.25
ERVFC1P60507 RNA5SP299-201ENST00000391203 116 ntBASIC0.97□□□□□ -2.25
ERVFC1P60507 MTND4LP19-201ENST00000403051 166 ntBASIC0.97□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 255.6 ms