Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 MIR548U-201ENST00000390728 81 ntBASIC-1□□□□□ -2.57
PKNOX1P55347 RNU6-644P-201ENST00000391155 98 ntBASIC-1□□□□□ -2.57
PKNOX1P55347 RNU7-200P-201ENST00000516105 62 ntBASIC-1□□□□□ -2.57
PKNOX1P55347 AC103810.7-201ENST00000607821 91 ntBASIC-1□□□□□ -2.57
PKNOX1P55347 MIR6854-201ENST00000614935 69 ntBASIC-1□□□□□ -2.57
PKNOX1P55347 MIR8068-201ENST00000618032 68 ntBASIC-1□□□□□ -2.57
PKNOX1P55347 Y_RNA.467-201ENST00000384297 102 ntBASIC-1.01□□□□□ -2.57
PKNOX1P55347 RNU6-813P-201ENST00000384691 107 ntBASIC-1.01□□□□□ -2.57
PKNOX1P55347 MIR517B-201ENST00000385102 67 ntBASIC-1.01□□□□□ -2.57
PKNOX1P55347 Y_RNA.649-201ENST00000459077 103 ntBASIC-1.01□□□□□ -2.57
PKNOX1P55347 SNORD4B-201ENST00000459083 72 ntBASIC-1.01□□□□□ -2.57
PKNOX1P55347 SCARNA17-201ENST00000516183 144 ntBASIC-1.01□□□□□ -2.57
PKNOX1P55347 MIR5009-201ENST00000578736 100 ntBASIC-1.01□□□□□ -2.57
PKNOX1P55347 AC104996.3-201ENST00000590718 94 ntBASIC-1.01□□□□□ -2.57
PKNOX1P55347 Y_RNA.568-201ENST00000384742 113 ntBASIC-1.02□□□□□ -2.57
PKNOX1P55347 RNU6-337P-201ENST00000391243 106 ntBASIC-1.02□□□□□ -2.57
PKNOX1P55347 RNU6-592P-201ENST00000411333 103 ntBASIC-1.02□□□□□ -2.57
PKNOX1P55347 Y_RNA.246-201ENST00000364495 108 ntBASIC-1.03□□□□□ -2.57
PKNOX1P55347 Y_RNA.563-201ENST00000384707 108 ntBASIC-1.03□□□□□ -2.57
PKNOX1P55347 MIRLET7B-201ENST00000385140 83 ntBASIC-1.03□□□□□ -2.57
PKNOX1P55347 RNU6-1211P-201ENST00000459179 105 ntBASIC-1.03□□□□□ -2.57
PKNOX1P55347 RNA5SP67-201ENST00000516422 131 ntBASIC-1.03□□□□□ -2.57
PKNOX1P55347 RNA5SP476-201ENST00000516613 103 ntBASIC-1.03□□□□□ -2.57
PKNOX1P55347 RNU6-990P-201ENST00000364385 104 ntBASIC-1.04□□□□□ -2.58
PKNOX1P55347 SNORD115-23-201ENST00000364461 82 ntBASIC-1.04□□□□□ -2.58
PKNOX1P55347 Y_RNA.491-201ENST00000384417 107 ntBASIC-1.04□□□□□ -2.58
PKNOX1P55347 AP000533.3-201ENST00000447704 118 ntBASIC-1.04□□□□□ -2.58
PKNOX1P55347 AC022137.1-201ENST00000483735 151 ntBASIC-1.04□□□□□ -2.58
PKNOX1P55347 MIR548Z-201ENST00000584743 97 ntBASIC-1.04□□□□□ -2.58
PKNOX1P55347 MIR3914-2-201ENST00000637339 95 ntBASIC-1.04□□□□□ -2.58
PKNOX1P55347 Y_RNA.12-201ENST00000362393 112 ntBASIC-1.05□□□□□ -2.58
PKNOX1P55347 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.05□□□□□ -2.58
PKNOX1P55347 SNORD74.6-201ENST00000364796 70 ntBASIC-1.05□□□□□ -2.58
PKNOX1P55347 SNORD83B-201ENST00000386745 93 ntBASIC-1.05□□□□□ -2.58
PKNOX1P55347 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.05□□□□□ -2.58
PKNOX1P55347 RNU6-1250P-201ENST00000391218 107 ntBASIC-1.05□□□□□ -2.58
PKNOX1P55347 AL500527.2-201ENST00000454105 95 ntBASIC-1.05□□□□□ -2.58
PKNOX1P55347 SNORD33.1-201ENST00000516213 88 ntBASIC-1.05□□□□□ -2.58
PKNOX1P55347 MIR4777-201ENST00000583710 86 ntBASIC-1.05□□□□□ -2.58
PKNOX1P55347 Y_RNA.343-201ENST00000365354 112 ntBASIC-1.06□□□□□ -2.58
PKNOX1P55347 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.06□□□□□ -2.58
PKNOX1P55347 MIR548A1-201ENST00000385041 97 ntBASIC-1.06□□□□□ -2.58
PKNOX1P55347 RNA5SP292-201ENST00000390974 118 ntBASIC-1.06□□□□□ -2.58
PKNOX1P55347 RNU6-971P-201ENST00000516920 106 ntBASIC-1.06□□□□□ -2.58
PKNOX1P55347 snoR1.1-201ENST00000628177 80 ntBASIC-1.06□□□□□ -2.58
PKNOX1P55347 RNU6-905P-201ENST00000384434 107 ntBASIC-1.07□□□□□ -2.58
PKNOX1P55347 SNORD90-201ENST00000391145 111 ntBASIC-1.07□□□□□ -2.58
PKNOX1P55347 SNORD75.2-201ENST00000408784 58 ntBASIC-1.07□□□□□ -2.58
PKNOX1P55347 RNU7-24P-201ENST00000458867 62 ntBASIC-1.07□□□□□ -2.58
PKNOX1P55347 Y_RNA.712-201ENST00000517011 92 ntBASIC-1.07□□□□□ -2.58
PKNOX1P55347 RNU6-519P-201ENST00000410590 108 ntBASIC-1.08□□□□□ -2.58
PKNOX1P55347 HAR1A.1-201ENST00000459583 118 ntBASIC-1.08□□□□□ -2.58
PKNOX1P55347 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.08□□□□□ -2.58
PKNOX1P55347 RNU6-795P-201ENST00000516323 103 ntBASIC-1.08□□□□□ -2.58
PKNOX1P55347 RNU6-1212P-201ENST00000517023 104 ntBASIC-1.08□□□□□ -2.58
PKNOX1P55347 Y_RNA.464-201ENST00000384282 110 ntBASIC-1.09□□□□□ -2.58
PKNOX1P55347 AC021146.9-201ENST00000512503 156 ntBASIC-1.09□□□□□ -2.58
PKNOX1P55347 RNU6-346P-201ENST00000516288 111 ntBASIC-1.09□□□□□ -2.58
PKNOX1P55347 RNU6-62P-201ENST00000516526 102 ntBASIC-1.09□□□□□ -2.58
PKNOX1P55347 AC012531.4-201ENST00000616509 177 ntBASIC-1.09□□□□□ -2.58
PKNOX1P55347 Y_RNA.10-201ENST00000362371 110 ntBASIC-1.1□□□□□ -2.59
PKNOX1P55347 Y_RNA.506-201ENST00000384494 102 ntBASIC-1.1□□□□□ -2.59
PKNOX1P55347 RNU6-80P-201ENST00000384195 107 ntBASIC-1.11□□□□□ -2.59
PKNOX1P55347 Y_RNA.586-201ENST00000391146 98 ntBASIC-1.11□□□□□ -2.59
PKNOX1P55347 RNU6-255P-201ENST00000516957 105 ntBASIC-1.11□□□□□ -2.59
PKNOX1P55347 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.11□□□□□ -2.59
PKNOX1P55347 Y_RNA.180-201ENST00000363867 113 ntBASIC-1.12□□□□□ -2.59
PKNOX1P55347 MIR548A3-201ENST00000385297 97 ntBASIC-1.12□□□□□ -2.59
PKNOX1P55347 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.12□□□□□ -2.59
PKNOX1P55347 SNORA18.5-201ENST00000516616 101 ntBASIC-1.12□□□□□ -2.59
PKNOX1P55347 uc_338.19-201ENST00000616808 99 ntBASIC-1.12□□□□□ -2.59
PKNOX1P55347 MIR6738-201ENST00000619620 64 ntBASIC-1.12□□□□□ -2.59
PKNOX1P55347 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.12□□□□□ -2.59
PKNOX1P55347 U6.95-201ENST00000636931 70 ntBASIC-1.12□□□□□ -2.59
PKNOX1P55347 RNY1P5-201ENST00000383890 115 ntBASIC-1.13□□□□□ -2.59
PKNOX1P55347 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-1.13□□□□□ -2.59
PKNOX1P55347 RNU6-659P-201ENST00000516454 104 ntBASIC-1.13□□□□□ -2.59
PKNOX1P55347 MIR4324-201ENST00000584846 72 ntBASIC-1.13□□□□□ -2.59
PKNOX1P55347 Y_RNA.281-201ENST00000364774 94 ntBASIC-1.14□□□□□ -2.59
PKNOX1P55347 RNU6-382P-201ENST00000365181 106 ntBASIC-1.14□□□□□ -2.59
PKNOX1P55347 RNU6-431P-201ENST00000383874 107 ntBASIC-1.14□□□□□ -2.59
PKNOX1P55347 MIR587-201ENST00000384845 96 ntBASIC-1.14□□□□□ -2.59
PKNOX1P55347 SNORD64-201ENST00000386683 67 ntBASIC-1.14□□□□□ -2.59
PKNOX1P55347 YWHAEP3-201ENST00000582767 121 ntBASIC-1.14□□□□□ -2.59
PKNOX1P55347 MIR4499-201ENST00000584834 69 ntBASIC-1.14□□□□□ -2.59
PKNOX1P55347 AC090617.8-201ENST00000623339 167 ntBASIC-1.14□□□□□ -2.59
PKNOX1P55347 Y_RNA.218-201ENST00000364218 104 ntBASIC-1.15□□□□□ -2.59
PKNOX1P55347 RNU6-1014P-201ENST00000383940 103 ntBASIC-1.15□□□□□ -2.59
PKNOX1P55347 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-1.15□□□□□ -2.59
PKNOX1P55347 RNY1P9-201ENST00000532431 109 ntBASIC-1.15□□□□□ -2.59
PKNOX1P55347 U6.96-201ENST00000636425 70 ntBASIC-1.15□□□□□ -2.59
PKNOX1P55347 MIR548I1-201ENST00000408810 149 ntBASIC-1.16□□□□□ -2.6
PKNOX1P55347 MTATP6P29-201ENST00000415057 132 ntBASIC-1.16□□□□□ -2.6
PKNOX1P55347 SNORD57-201ENST00000448188 72 ntBASIC-1.16□□□□□ -2.6
PKNOX1P55347 SNORA62.4-201ENST00000365504 151 ntBASIC-1.17□□□□□ -2.6
PKNOX1P55347 SNORD58A-201ENST00000383875 65 ntBASIC-1.17□□□□□ -2.6
PKNOX1P55347 RNU6-10P-201ENST00000384036 107 ntBASIC-1.17□□□□□ -2.6
PKNOX1P55347 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.17□□□□□ -2.6
PKNOX1P55347 SNORA19.1-201ENST00000410656 129 ntBASIC-1.17□□□□□ -2.6
PKNOX1P55347 snoU13.17-201ENST00000458802 104 ntBASIC-1.17□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 276.3 ms