Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 RNA5SP170-201ENST00000517150 101 ntBASIC0.13□□□□□ -2.39
CDH12P55289 SCARNA11.2-201ENST00000517183 154 ntBASIC0.13□□□□□ -2.39
CDH12P55289 AC084368.1-201ENST00000620935 65 ntBASIC0.13□□□□□ -2.39
CDH12P55289 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.12□□□□□ -2.39
CDH12P55289 RNU5F-1-201ENST00000362507 117 ntBASIC0.12□□□□□ -2.39
CDH12P55289 RNA5SP325-201ENST00000363756 130 ntBASIC0.12□□□□□ -2.39
CDH12P55289 SNORD114-9-201ENST00000364370 72 ntBASIC0.12□□□□□ -2.39
CDH12P55289 RNU6-294P-201ENST00000364999 102 ntBASIC0.12□□□□□ -2.39
CDH12P55289 MIR652-201ENST00000385278 98 ntBASIC0.12□□□□□ -2.39
CDH12P55289 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.12□□□□□ -2.39
CDH12P55289 MIR876-201ENST00000401147 81 ntBASIC0.12□□□□□ -2.39
CDH12P55289 AC093729.1-201ENST00000513074 128 ntBASIC0.12□□□□□ -2.39
CDH12P55289 MIR924-201ENST00000638017 53 ntBASIC0.12□□□□□ -2.39
CDH12P55289 RNU6-495P-201ENST00000362995 107 ntBASIC0.11□□□□□ -2.39
CDH12P55289 SNORD115-37-201ENST00000363768 82 ntBASIC0.11□□□□□ -2.39
CDH12P55289 MIR489-201ENST00000384923 84 ntBASIC0.11□□□□□ -2.39
CDH12P55289 RNA5SP299-201ENST00000391203 116 ntBASIC0.11□□□□□ -2.39
CDH12P55289 MIR1295A-201ENST00000408463 79 ntBASIC0.11□□□□□ -2.39
CDH12P55289 Y_RNA.611-201ENST00000410682 108 ntBASIC0.11□□□□□ -2.39
CDH12P55289 RNU7-188P-201ENST00000517063 64 ntBASIC0.11□□□□□ -2.39
CDH12P55289 snoMBII-202.2-201ENST00000517263 86 ntBASIC0.11□□□□□ -2.39
CDH12P55289 MIR4514-201ENST00000581410 57 ntBASIC0.11□□□□□ -2.39
CDH12P55289 SNORA75.1-201ENST00000391130 148 ntBASIC0.1□□□□□ -2.39
CDH12P55289 AC140658.3-201ENST00000567603 271 ntBASIC0.1□□□□□ -2.39
CDH12P55289 Y_RNA.73-201ENST00000362910 113 ntBASIC0.09□□□□□ -2.4
CDH12P55289 RNU6-824P-201ENST00000363724 104 ntBASIC0.09□□□□□ -2.4
CDH12P55289 MIR593-201ENST00000384856 100 ntBASIC0.09□□□□□ -2.4
CDH12P55289 MIR610-201ENST00000385139 96 ntBASIC0.09□□□□□ -2.4
CDH12P55289 MIR1273G-201ENST00000577677 100 ntBASIC0.09□□□□□ -2.4
CDH12P55289 RN7SL660P-201ENST00000614852 299 ntBASIC0.09□□□□□ -2.4
CDH12P55289 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.09□□□□□ -2.4
CDH12P55289 SNORD114-5-201ENST00000362928 70 ntBASIC0.08□□□□□ -2.4
CDH12P55289 MIR145-201ENST00000384967 88 ntBASIC0.08□□□□□ -2.4
CDH12P55289 AC097510.1-201ENST00000510945 133 ntBASIC0.08□□□□□ -2.4
CDH12P55289 SCARNA17.3-201ENST00000516381 125 ntBASIC0.08□□□□□ -2.4
CDH12P55289 AC023932.2-201ENST00000603176 175 ntBASIC0.08□□□□□ -2.4
CDH12P55289 IGLL4P-201ENST00000614590 133 ntBASIC0.08□□□□□ -2.4
CDH12P55289 RNU6-624P-201ENST00000363411 107 ntBASIC0.07□□□□□ -2.4
CDH12P55289 RNY1P1-201ENST00000364372 112 ntBASIC0.07□□□□□ -2.4
CDH12P55289 RNU6-382P-201ENST00000365181 106 ntBASIC0.07□□□□□ -2.4
CDH12P55289 SNORD75.2-201ENST00000408784 58 ntBASIC0.07□□□□□ -2.4
CDH12P55289 RNU7-24P-201ENST00000458867 62 ntBASIC0.07□□□□□ -2.4
CDH12P55289 AC006160.2-201ENST00000637708 154 ntBASIC0.07□□□□□ -2.4
CDH12P55289 SNORD114-29-201ENST00000364819 70 ntBASIC0.06□□□□□ -2.4
CDH12P55289 RNU6-175P-201ENST00000516896 107 ntBASIC0.06□□□□□ -2.4
CDH12P55289 MIR4743-201ENST00000584576 69 ntBASIC0.06□□□□□ -2.4
CDH12P55289 RNU6-208P-201ENST00000362431 107 ntBASIC0.05□□□□□ -2.4
CDH12P55289 SNORD114-4-201ENST00000363962 75 ntBASIC0.05□□□□□ -2.4
CDH12P55289 MIR892B-201ENST00000401279 77 ntBASIC0.05□□□□□ -2.4
CDH12P55289 RNA5SP163-201ENST00000410304 99 ntBASIC0.05□□□□□ -2.4
CDH12P55289 AL450471.1-201ENST00000447509 127 ntBASIC0.05□□□□□ -2.4
CDH12P55289 RNU6ATAC17P-201ENST00000516074 71 ntBASIC0.05□□□□□ -2.4
CDH12P55289 MIR4768-201ENST00000585270 74 ntBASIC0.05□□□□□ -2.4
CDH12P55289 MIR330-201ENST00000362196 94 ntBASIC0.04□□□□□ -2.4
CDH12P55289 MIR20A-201ENST00000362279 71 ntBASIC0.04□□□□□ -2.4
CDH12P55289 SNORD114-26-201ENST00000363543 72 ntBASIC0.04□□□□□ -2.4
CDH12P55289 MIR582-201ENST00000365731 98 ntBASIC0.04□□□□□ -2.4
CDH12P55289 SNORD77.2-201ENST00000391045 68 ntBASIC0.04□□□□□ -2.4
CDH12P55289 RNU6-1108P-201ENST00000516308 104 ntBASIC0.04□□□□□ -2.4
CDH12P55289 RNU6-180P-201ENST00000516697 61 ntBASIC0.04□□□□□ -2.4
CDH12P55289 MIR5588-201ENST00000581890 63 ntBASIC0.04□□□□□ -2.4
CDH12P55289 U6.81-201ENST00000612550 106 ntBASIC0.04□□□□□ -2.4
CDH12P55289 MIR4773-1-201ENST00000637203 78 ntBASIC0.04□□□□□ -2.4
CDH12P55289 MIR494-201ENST00000349529 81 ntBASIC0.03□□□□□ -2.4
CDH12P55289 RNU6-1255P-201ENST00000363434 112 ntBASIC0.03□□□□□ -2.4
CDH12P55289 RNU6-979P-201ENST00000383896 107 ntBASIC0.03□□□□□ -2.4
CDH12P55289 MIR450A2-201ENST00000385022 100 ntBASIC0.03□□□□□ -2.4
CDH12P55289 AC244090.1-201ENST00000441884 93 ntBASIC0.03□□□□□ -2.4
CDH12P55289 AC006254.2-201ENST00000603259 279 ntBASIC0.03□□□□□ -2.4
CDH12P55289 MIR8087-201ENST00000612745 78 ntBASIC0.03□□□□□ -2.4
CDH12P55289 MIR6514-201ENST00000622549 70 ntBASIC0.03□□□□□ -2.4
CDH12P55289 MIR371B-201ENST00000638082 66 ntBASIC0.03□□□□□ -2.4
CDH12P55289 RNU6-592P-201ENST00000411333 103 ntBASIC0.02□□□□□ -2.41
CDH12P55289 Y_RNA.660-201ENST00000516002 120 ntBASIC0.02□□□□□ -2.41
CDH12P55289 Y_RNA.43-201ENST00000362670 111 ntBASIC0.01□□□□□ -2.41
CDH12P55289 Y_RNA.371-201ENST00000365591 113 ntBASIC0.01□□□□□ -2.41
CDH12P55289 RNA5SP63-201ENST00000391225 112 ntBASIC0.01□□□□□ -2.41
CDH12P55289 MIR548E-201ENST00000408287 88 ntBASIC0.01□□□□□ -2.41
CDH12P55289 Y_RNA.606-201ENST00000410579 103 ntBASIC0.01□□□□□ -2.41
CDH12P55289 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC0.01□□□□□ -2.41
CDH12P55289 RNU7-165P-201ENST00000458864 60 ntBASIC0.01□□□□□ -2.41
CDH12P55289 AC022137.1-201ENST00000483735 151 ntBASIC0.01□□□□□ -2.41
CDH12P55289 RNA5SP480-201ENST00000516840 109 ntBASIC0.01□□□□□ -2.41
CDH12P55289 MIR4290-201ENST00000583807 95 ntBASIC0.01□□□□□ -2.41
CDH12P55289 DLEU2_3.2-201ENST00000612883 73 ntBASIC0.01□□□□□ -2.41
CDH12P55289 RNU6-990P-201ENST00000364385 104 ntBASIC0□□□□□ -2.41
CDH12P55289 MIR106A-201ENST00000384870 81 ntBASIC0□□□□□ -2.41
CDH12P55289 RNU7-159P-201ENST00000459284 62 ntBASIC0□□□□□ -2.41
CDH12P55289 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0□□□□□ -2.41
CDH12P55289 RNU6-557P-201ENST00000516842 110 ntBASIC0□□□□□ -2.41
CDH12P55289 CR383656.4-201ENST00000546909 122 ntBASIC0□□□□□ -2.41
CDH12P55289 MIR6718-201ENST00000616153 80 ntBASIC0□□□□□ -2.41
CDH12P55289 MIR7111-201ENST00000619751 72 ntBASIC0□□□□□ -2.41
CDH12P55289 RNU6-478P-201ENST00000363904 110 ntBASIC-0.01□□□□□ -2.41
CDH12P55289 RNU6-340P-201ENST00000364005 107 ntBASIC-0.01□□□□□ -2.41
CDH12P55289 Y_RNA.264-201ENST00000364665 102 ntBASIC-0.01□□□□□ -2.41
CDH12P55289 Y_RNA.426-201ENST00000384068 113 ntBASIC-0.01□□□□□ -2.41
CDH12P55289 Y_RNA.607-201ENST00000410597 98 ntBASIC-0.01□□□□□ -2.41
CDH12P55289 AC062037.1-201ENST00000605302 128 ntBASIC-0.01□□□□□ -2.41
CDH12P55289 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 341.5 ms