Protein–RNA interactions for Protein: P53804

TTC3, E3 ubiquitin-protein ligase TTC3, humanhuman

Predictions only

Length 2,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3P53804 SNORA36.1-201ENST00000363424 132 ntBASIC0.62□□□□□ -2.31
TTC3P53804 RNU6-269P-201ENST00000391077 97 ntBASIC0.62□□□□□ -2.31
TTC3P53804 SNORD75.2-201ENST00000408784 58 ntBASIC0.62□□□□□ -2.31
TTC3P53804 AL691482.2-201ENST00000457453 84 ntBASIC0.62□□□□□ -2.31
TTC3P53804 ACA64.5-201ENST00000516207 127 ntBASIC0.62□□□□□ -2.31
TTC3P53804 RNU6-1229P-201ENST00000364295 107 ntBASIC0.62□□□□□ -2.31
TTC3P53804 RNU6-776P-201ENST00000364403 104 ntBASIC0.62□□□□□ -2.31
TTC3P53804 RNU6-1022P-201ENST00000365049 104 ntBASIC0.62□□□□□ -2.31
TTC3P53804 Y_RNA.606-201ENST00000410579 103 ntBASIC0.62□□□□□ -2.31
TTC3P53804 MIR6509-201ENST00000614603 85 ntBASIC0.62□□□□□ -2.31
TTC3P53804 AC243829.3-201ENST00000622177 108 ntBASIC0.62□□□□□ -2.31
TTC3P53804 Y_RNA.32-201ENST00000362589 110 ntBASIC0.61□□□□□ -2.31
TTC3P53804 SNORA8.2-201ENST00000384372 139 ntBASIC0.61□□□□□ -2.31
TTC3P53804 RNU6-24P-201ENST00000384440 107 ntBASIC0.61□□□□□ -2.31
TTC3P53804 RNA5SP94-201ENST00000516917 108 ntBASIC0.61□□□□□ -2.31
TTC3P53804 MIR5706-201ENST00000579841 80 ntBASIC0.61□□□□□ -2.31
TTC3P53804 RNU6-824P-201ENST00000363724 104 ntBASIC0.6□□□□□ -2.31
TTC3P53804 SNORA2A-201ENST00000383885 135 ntBASIC0.6□□□□□ -2.31
TTC3P53804 RNY1P8-201ENST00000383970 114 ntBASIC0.6□□□□□ -2.31
TTC3P53804 AC074348.1-201ENST00000426503 132 ntBASIC0.6□□□□□ -2.31
TTC3P53804 PSMC1P5-201ENST00000512850 177 ntBASIC0.6□□□□□ -2.31
TTC3P53804 SCARNA16.5-201ENST00000517114 183 ntBASIC0.6□□□□□ -2.31
TTC3P53804 SNORA25.18-201ENST00000607153 114 ntBASIC0.6□□□□□ -2.31
TTC3P53804 AC145423.2-201ENST00000610631 239 ntBASIC0.6□□□□□ -2.31
TTC3P53804 RNU6-686P-201ENST00000364839 107 ntBASIC0.6□□□□□ -2.31
TTC3P53804 RNU6-110P-201ENST00000384508 104 ntBASIC0.6□□□□□ -2.31
TTC3P53804 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC0.6□□□□□ -2.31
TTC3P53804 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.6□□□□□ -2.31
TTC3P53804 MIR924-201ENST00000638017 53 ntBASIC0.6□□□□□ -2.31
TTC3P53804 RNU1-141P-201ENST00000364623 158 ntBASIC0.59□□□□□ -2.31
TTC3P53804 Y_RNA.374-201ENST00000365606 101 ntBASIC0.59□□□□□ -2.31
TTC3P53804 SNORD110-201ENST00000408189 75 ntBASIC0.59□□□□□ -2.31
TTC3P53804 MIR1197-201ENST00000408818 88 ntBASIC0.59□□□□□ -2.31
TTC3P53804 RNU6-380P-201ENST00000410207 107 ntBASIC0.59□□□□□ -2.31
TTC3P53804 MIR664A-201ENST00000626086 82 ntBASIC0.59□□□□□ -2.31
TTC3P53804 RNA5SP457-201ENST00000363657 124 ntBASIC0.59□□□□□ -2.32
TTC3P53804 MIR92A1-201ENST00000385233 78 ntBASIC0.59□□□□□ -2.32
TTC3P53804 HMGN2P22-201ENST00000427588 175 ntBASIC0.59□□□□□ -2.32
TTC3P53804 RNA5SP330-201ENST00000517096 96 ntBASIC0.59□□□□□ -2.32
TTC3P53804 MIR548O2-201ENST00000616090 70 ntBASIC0.59□□□□□ -2.32
TTC3P53804 uc_338.10-201ENST00000621872 182 ntBASIC0.59□□□□□ -2.32
TTC3P53804 RNA5SP257-201ENST00000363023 116 ntBASIC0.58□□□□□ -2.32
TTC3P53804 Y_RNA.423-201ENST00000384057 113 ntBASIC0.58□□□□□ -2.32
TTC3P53804 MIR203A-201ENST00000384836 110 ntBASIC0.58□□□□□ -2.32
TTC3P53804 SNORA9.1-201ENST00000362412 131 ntBASIC0.57□□□□□ -2.32
TTC3P53804 SNORD118-201ENST00000363593 134 ntBASIC0.57□□□□□ -2.32
TTC3P53804 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.57□□□□□ -2.32
TTC3P53804 Y_RNA.788-201ENST00000622394 112 ntBASIC0.57□□□□□ -2.32
TTC3P53804 AC018659.1-201ENST00000551083 169 ntBASIC0.57□□□□□ -2.32
TTC3P53804 SNORA8.1-201ENST00000384250 140 ntBASIC0.56□□□□□ -2.32
TTC3P53804 RNU6-863P-201ENST00000515989 104 ntBASIC0.56□□□□□ -2.32
TTC3P53804 MIR3657-201ENST00000584818 117 ntBASIC0.56□□□□□ -2.32
TTC3P53804 RNU1-29P-201ENST00000606574 126 ntBASIC0.56□□□□□ -2.32
TTC3P53804 MIR8053-201ENST00000613344 75 ntBASIC0.56□□□□□ -2.32
TTC3P53804 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
TTC3P53804 Y_RNA.125-201ENST00000363371 111 ntBASIC0.55□□□□□ -2.32
TTC3P53804 RNU6-587P-201ENST00000391282 106 ntBASIC0.55□□□□□ -2.32
TTC3P53804 SNORD2-201ENST00000459163 69 ntBASIC0.55□□□□□ -2.32
TTC3P53804 RNU6-638P-201ENST00000516582 104 ntBASIC0.55□□□□□ -2.32
TTC3P53804 RNU6-807P-201ENST00000516805 107 ntBASIC0.55□□□□□ -2.32
TTC3P53804 SNORD90-201ENST00000391145 111 ntBASIC0.55□□□□□ -2.32
TTC3P53804 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.55□□□□□ -2.32
TTC3P53804 Y_RNA.681-201ENST00000516445 113 ntBASIC0.55□□□□□ -2.32
TTC3P53804 RNU5B-6P-201ENST00000516765 68 ntBASIC0.55□□□□□ -2.32
TTC3P53804 RNA5SP268-201ENST00000516828 124 ntBASIC0.55□□□□□ -2.32
TTC3P53804 AC098934.3-201ENST00000430450 190 ntBASIC0.54□□□□□ -2.32
TTC3P53804 RNU6-382P-201ENST00000365181 106 ntBASIC0.54□□□□□ -2.32
TTC3P53804 RNU6-260P-201ENST00000384092 107 ntBASIC0.54□□□□□ -2.32
TTC3P53804 SNORA40.8-201ENST00000411034 126 ntBASIC0.54□□□□□ -2.32
TTC3P53804 FGF7P7-201ENST00000514120 227 ntBASIC0.54□□□□□ -2.32
TTC3P53804 RNU6-848P-201ENST00000515948 107 ntBASIC0.54□□□□□ -2.32
TTC3P53804 RNU6-617P-201ENST00000516147 107 ntBASIC0.54□□□□□ -2.32
TTC3P53804 RNU6-473P-201ENST00000516164 107 ntBASIC0.54□□□□□ -2.32
TTC3P53804 RNU6-1049P-201ENST00000516414 107 ntBASIC0.54□□□□□ -2.32
TTC3P53804 MIR7107-201ENST00000611489 80 ntBASIC0.54□□□□□ -2.32
TTC3P53804 MIR20A-201ENST00000362279 71 ntBASIC0.53□□□□□ -2.32
TTC3P53804 Y_RNA.30-201ENST00000362572 97 ntBASIC0.53□□□□□ -2.32
TTC3P53804 RNA5SP517-201ENST00000364724 117 ntBASIC0.53□□□□□ -2.32
TTC3P53804 VTRNA1-3-201ENST00000365645 89 ntBASIC0.53□□□□□ -2.32
TTC3P53804 RNU6-54P-201ENST00000365563 107 ntBASIC0.52□□□□□ -2.33
TTC3P53804 MIR516B1-201ENST00000385211 90 ntBASIC0.52□□□□□ -2.33
TTC3P53804 AC114737.2-201ENST00000421583 173 ntBASIC0.52□□□□□ -2.33
TTC3P53804 RNU6-752P-201ENST00000516376 102 ntBASIC0.52□□□□□ -2.33
TTC3P53804 SCARNA17.3-201ENST00000516381 125 ntBASIC0.52□□□□□ -2.33
TTC3P53804 Y_RNA.250-201ENST00000364542 110 ntBASIC0.52□□□□□ -2.33
TTC3P53804 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
TTC3P53804 MIR4773-1-201ENST00000637203 78 ntBASIC0.51□□□□□ -2.33
TTC3P53804 NAMPTP3-201ENST00000569273 224 ntBASIC0.5□□□□□ -2.33
TTC3P53804 SNORA70.25-201ENST00000612741 95 ntBASIC0.5□□□□□ -2.33
TTC3P53804 MIR8087-201ENST00000612745 78 ntBASIC0.5□□□□□ -2.33
TTC3P53804 Y_RNA.545-201ENST00000384652 105 ntBASIC0.5□□□□□ -2.33
TTC3P53804 MIR760-201ENST00000390220 80 ntBASIC0.5□□□□□ -2.33
TTC3P53804 SNORD71-201ENST00000411292 86 ntBASIC0.5□□□□□ -2.33
TTC3P53804 MIR4460-201ENST00000577862 86 ntBASIC0.5□□□□□ -2.33
TTC3P53804 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
TTC3P53804 MIR103A1-201ENST00000362165 78 ntBASIC0.49□□□□□ -2.33
TTC3P53804 SNORD113.1-201ENST00000363280 73 ntBASIC0.49□□□□□ -2.33
TTC3P53804 RNU6-1241P-201ENST00000384536 107 ntBASIC0.49□□□□□ -2.33
TTC3P53804 MIR889-201ENST00000401280 79 ntBASIC0.49□□□□□ -2.33
TTC3P53804 RNA5SP484-201ENST00000458857 111 ntBASIC0.49□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 216.8 ms