Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 SNORA17.3-201ENST00000391159 129 ntBASIC2.13□□□□□ -2.07
NUBP1P53384 MIR6828-201ENST00000636181 60 ntBASIC2.13□□□□□ -2.07
NUBP1P53384 U6.96-201ENST00000636425 70 ntBASIC2.13□□□□□ -2.07
NUBP1P53384 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.13□□□□□ -2.07
NUBP1P53384 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.13□□□□□ -2.07
NUBP1P53384 MIR200A-201ENST00000384875 90 ntBASIC2.12□□□□□ -2.07
NUBP1P53384 AP1B1P2-201ENST00000416196 106 ntBASIC2.12□□□□□ -2.07
NUBP1P53384 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC2.12□□□□□ -2.07
NUBP1P53384 SNORD110-201ENST00000408189 75 ntBASIC2.11□□□□□ -2.07
NUBP1P53384 AL021921.1-201ENST00000442774 93 ntBASIC2.11□□□□□ -2.07
NUBP1P53384 RNU6-231P-201ENST00000517122 103 ntBASIC2.11□□□□□ -2.07
NUBP1P53384 Y_RNA.325-201ENST00000365171 122 ntBASIC2.1□□□□□ -2.07
NUBP1P53384 SNORA41B-201ENST00000384785 128 ntBASIC2.1□□□□□ -2.07
NUBP1P53384 CYP3A54P-201ENST00000566950 75 ntBASIC2.1□□□□□ -2.07
NUBP1P53384 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
NUBP1P53384 Y_RNA.540-201ENST00000384638 111 ntBASIC2.09□□□□□ -2.07
NUBP1P53384 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC2.09□□□□□ -2.07
NUBP1P53384 MIR4473-201ENST00000583731 91 ntBASIC2.08□□□□□ -2.08
NUBP1P53384 SNORA9.1-201ENST00000362412 131 ntBASIC2.07□□□□□ -2.08
NUBP1P53384 RNA5SP327-201ENST00000362494 101 ntBASIC2.07□□□□□ -2.08
NUBP1P53384 RNA5SP190-201ENST00000365222 118 ntBASIC2.07□□□□□ -2.08
NUBP1P53384 MIR548E-201ENST00000408287 88 ntBASIC2.07□□□□□ -2.08
NUBP1P53384 MIR6504-201ENST00000613520 61 ntBASIC2.07□□□□□ -2.08
NUBP1P53384 Y_RNA.224-201ENST00000364308 111 ntBASIC2.06□□□□□ -2.08
NUBP1P53384 RNA5SP37-201ENST00000365420 130 ntBASIC2.06□□□□□ -2.08
NUBP1P53384 MIR19B1-201ENST00000384829 87 ntBASIC2.06□□□□□ -2.08
NUBP1P53384 RNU4-45P-201ENST00000365469 141 ntBASIC2.05□□□□□ -2.08
NUBP1P53384 MIR582-201ENST00000365731 98 ntBASIC2.05□□□□□ -2.08
NUBP1P53384 SNORA25.15-201ENST00000516487 89 ntBASIC2.05□□□□□ -2.08
NUBP1P53384 MIR4255-201ENST00000579351 72 ntBASIC2.05□□□□□ -2.08
NUBP1P53384 AP000553.5-201ENST00000641933 54 ntBASIC2.05□□□□□ -2.08
NUBP1P53384 MIR21-201ENST00000362134 72 ntBASIC2.04□□□□□ -2.08
NUBP1P53384 Y_RNA.74-201ENST00000362911 99 ntBASIC2.04□□□□□ -2.08
NUBP1P53384 SNORD116.2-201ENST00000391251 93 ntBASIC2.04□□□□□ -2.08
NUBP1P53384 MIR4285-201ENST00000581001 85 ntBASIC2.04□□□□□ -2.08
NUBP1P53384 MIR548AE1-201ENST00000583292 70 ntBASIC2.04□□□□□ -2.08
NUBP1P53384 MIR1276-201ENST00000408707 83 ntBASIC2.03□□□□□ -2.08
NUBP1P53384 RNA5SP268-201ENST00000516828 124 ntBASIC2.03□□□□□ -2.08
NUBP1P53384 RNU6-518P-201ENST00000516056 96 ntBASIC2.02□□□□□ -2.09
NUBP1P53384 RNU6-980P-201ENST00000516925 103 ntBASIC2.02□□□□□ -2.09
NUBP1P53384 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
NUBP1P53384 SNORD116-16-201ENST00000384533 92 ntBASIC2.01□□□□□ -2.09
NUBP1P53384 RNU4-62P-201ENST00000410125 130 ntBASIC2.01□□□□□ -2.09
NUBP1P53384 SNORD13-201ENST00000459299 104 ntBASIC2.01□□□□□ -2.09
NUBP1P53384 MIR7110-201ENST00000612638 86 ntBASIC2.01□□□□□ -2.09
NUBP1P53384 AC243829.6-201ENST00000612652 106 ntBASIC2.01□□□□□ -2.09
NUBP1P53384 RNU6-392P-201ENST00000364926 101 ntBASIC2□□□□□ -2.09
NUBP1P53384 RNU6-42P-201ENST00000384165 107 ntBASIC2□□□□□ -2.09
NUBP1P53384 MIR516B1-201ENST00000385211 90 ntBASIC2□□□□□ -2.09
NUBP1P53384 MIR527-201ENST00000385244 85 ntBASIC2□□□□□ -2.09
NUBP1P53384 RNU4-33P-201ENST00000364316 85 ntBASIC1.99□□□□□ -2.09
NUBP1P53384 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
NUBP1P53384 uc_338.20-201ENST00000621563 178 ntBASIC1.99□□□□□ -2.09
NUBP1P53384 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.98□□□□□ -2.09
NUBP1P53384 MIR18A-201ENST00000362310 71 ntBASIC1.98□□□□□ -2.09
NUBP1P53384 SNORD2-201ENST00000459163 69 ntBASIC1.98□□□□□ -2.09
NUBP1P53384 SNORD124-201ENST00000459577 104 ntBASIC1.98□□□□□ -2.09
NUBP1P53384 RNA5SP480-201ENST00000516840 109 ntBASIC1.98□□□□□ -2.09
NUBP1P53384 BX248123.2-201ENST00000606318 124 ntBASIC1.98□□□□□ -2.09
NUBP1P53384 RNU6-1246P-201ENST00000391064 107 ntBASIC1.97□□□□□ -2.09
NUBP1P53384 Y_RNA.783-201ENST00000613546 102 ntBASIC1.97□□□□□ -2.09
NUBP1P53384 AC244090.1-201ENST00000441884 93 ntBASIC1.96□□□□□ -2.1
NUBP1P53384 AC012493.3-201ENST00000604494 112 ntBASIC1.96□□□□□ -2.1
NUBP1P53384 DLEU2_4.2-201ENST00000616613 58 ntBASIC1.96□□□□□ -2.1
NUBP1P53384 MIR20A-201ENST00000362279 71 ntBASIC1.95□□□□□ -2.1
NUBP1P53384 SNORD114-24-201ENST00000365029 72 ntBASIC1.95□□□□□ -2.1
NUBP1P53384 AC011195.1-201ENST00000578177 177 ntBASIC1.95□□□□□ -2.1
NUBP1P53384 SNORA36.1-201ENST00000363424 132 ntBASIC1.94□□□□□ -2.1
NUBP1P53384 RNA5SP220-201ENST00000516298 104 ntBASIC1.94□□□□□ -2.1
NUBP1P53384 AC084768.2-201ENST00000622736 221 ntBASIC1.94□□□□□ -2.1
NUBP1P53384 Y_RNA.327-201ENST00000365201 102 ntBASIC1.93□□□□□ -2.1
NUBP1P53384 RNU6-930P-201ENST00000390938 100 ntBASIC1.93□□□□□ -2.1
NUBP1P53384 MIR1255B2-201ENST00000408618 67 ntBASIC1.93□□□□□ -2.1
NUBP1P53384 SNORD114-26-201ENST00000363543 72 ntBASIC1.92□□□□□ -2.1
NUBP1P53384 RNU7-95P-201ENST00000459222 64 ntBASIC1.92□□□□□ -2.1
NUBP1P53384 MIR502-201ENST00000606349 86 ntBASIC1.92□□□□□ -2.1
NUBP1P53384 MIR429-201ENST00000362106 83 ntBASIC1.91□□□□□ -2.1
NUBP1P53384 MIRLET7G-201ENST00000362280 84 ntBASIC1.91□□□□□ -2.1
NUBP1P53384 Y_RNA.282-201ENST00000364793 102 ntBASIC1.91□□□□□ -2.1
NUBP1P53384 RNA5SP255-201ENST00000516370 107 ntBASIC1.91□□□□□ -2.1
NUBP1P53384 MIR7107-201ENST00000611489 80 ntBASIC1.91□□□□□ -2.1
NUBP1P53384 AC243829.3-201ENST00000622177 108 ntBASIC1.91□□□□□ -2.1
NUBP1P53384 RNU6-246P-201ENST00000384702 107 ntBASIC1.9□□□□□ -2.11
NUBP1P53384 RNA5SP338-201ENST00000410495 85 ntBASIC1.9□□□□□ -2.11
NUBP1P53384 RNA5SP94-201ENST00000516917 108 ntBASIC1.9□□□□□ -2.11
NUBP1P53384 SNORA40.16-201ENST00000517238 121 ntBASIC1.9□□□□□ -2.11
NUBP1P53384 MIR548X-201ENST00000580069 75 ntBASIC1.9□□□□□ -2.11
NUBP1P53384 MIR4452-201ENST00000583004 71 ntBASIC1.9□□□□□ -2.11
NUBP1P53384 RNU6-35P-201ENST00000384530 107 ntBASIC1.89□□□□□ -2.11
NUBP1P53384 MIR519A2-201ENST00000384990 87 ntBASIC1.89□□□□□ -2.11
NUBP1P53384 MIR618-201ENST00000385287 98 ntBASIC1.89□□□□□ -2.11
NUBP1P53384 SNORD99-201ENST00000408612 74 ntBASIC1.89□□□□□ -2.11
NUBP1P53384 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.89□□□□□ -2.11
NUBP1P53384 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.89□□□□□ -2.11
NUBP1P53384 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.89□□□□□ -2.11
NUBP1P53384 SNORA40B-201ENST00000385573 128 ntBASIC1.88□□□□□ -2.11
NUBP1P53384 MIR5706-201ENST00000579841 80 ntBASIC1.88□□□□□ -2.11
NUBP1P53384 MIR4303-201ENST00000581299 66 ntBASIC1.88□□□□□ -2.11
NUBP1P53384 AC104435.1-201ENST00000483483 166 ntBASIC1.87□□□□□ -2.11
NUBP1P53384 RNA5SP364-201ENST00000516938 78 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms