Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 MIR6828-201ENST00000636181 60 ntBASIC1.25□□□□□ -2.21
USP11P51784 SNORA36.1-201ENST00000363424 132 ntBASIC1.24□□□□□ -2.21
USP11P51784 SNORA8.2-201ENST00000384372 139 ntBASIC1.24□□□□□ -2.21
USP11P51784 MIR1285-1-201ENST00000408593 84 ntBASIC1.24□□□□□ -2.21
USP11P51784 RNA5SP484-201ENST00000458857 111 ntBASIC1.24□□□□□ -2.21
USP11P51784 RNA5SP255-201ENST00000516370 107 ntBASIC1.24□□□□□ -2.21
USP11P51784 RNA5SP147-201ENST00000516493 109 ntBASIC1.24□□□□□ -2.21
USP11P51784 AL162376.1-201ENST00000624117 175 ntBASIC1.24□□□□□ -2.21
USP11P51784 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
USP11P51784 RNU1-124P-201ENST00000363861 145 ntBASIC1.23□□□□□ -2.21
USP11P51784 RNU6-668P-201ENST00000364180 107 ntBASIC1.23□□□□□ -2.21
USP11P51784 RNU1-93P-201ENST00000364704 169 ntBASIC1.23□□□□□ -2.21
USP11P51784 MIR7-2-201ENST00000384970 110 ntBASIC1.23□□□□□ -2.21
USP11P51784 MTND4LP1-201ENST00000446263 157 ntBASIC1.23□□□□□ -2.21
USP11P51784 AC087343.1-201ENST00000477341 475 ntBASIC1.23□□□□□ -2.21
USP11P51784 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
USP11P51784 SNORA2.1-201ENST00000363089 137 ntBASIC1.22□□□□□ -2.21
USP11P51784 RNU6-656P-201ENST00000516785 107 ntBASIC1.22□□□□□ -2.21
USP11P51784 AC025627.3-201ENST00000582078 182 ntBASIC1.22□□□□□ -2.21
USP11P51784 MIR18A-201ENST00000362310 71 ntBASIC1.21□□□□□ -2.22
USP11P51784 SNORD114-27-201ENST00000363766 70 ntBASIC1.21□□□□□ -2.22
USP11P51784 SNORD114-24-201ENST00000365029 72 ntBASIC1.21□□□□□ -2.22
USP11P51784 Y_RNA.375-201ENST00000365625 101 ntBASIC1.21□□□□□ -2.22
USP11P51784 SNORD99-201ENST00000408612 74 ntBASIC1.21□□□□□ -2.22
USP11P51784 AC069503.3-201ENST00000618674 145 ntBASIC1.21□□□□□ -2.22
USP11P51784 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
USP11P51784 RNU6-499P-201ENST00000365615 107 ntBASIC1.2□□□□□ -2.22
USP11P51784 AC011195.1-201ENST00000578177 177 ntBASIC1.2□□□□□ -2.22
USP11P51784 SNORD114-21-201ENST00000606412 72 ntBASIC1.2□□□□□ -2.22
USP11P51784 MIR6739-201ENST00000622461 75 ntBASIC1.2□□□□□ -2.22
USP11P51784 RNU6-669P-201ENST00000365575 107 ntBASIC1.19□□□□□ -2.22
USP11P51784 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
USP11P51784 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
USP11P51784 MIR520E-201ENST00000384867 87 ntBASIC1.18□□□□□ -2.22
USP11P51784 AC092634.7-201ENST00000621022 103 ntBASIC1.18□□□□□ -2.22
USP11P51784 snoU13.13-201ENST00000458842 104 ntBASIC1.17□□□□□ -2.22
USP11P51784 RPS29P1-201ENST00000465274 159 ntBASIC1.16□□□□□ -2.22
USP11P51784 OR2A41P-201ENST00000473586 105 ntBASIC1.16□□□□□ -2.22
USP11P51784 RNA5SP227-201ENST00000516184 113 ntBASIC1.16□□□□□ -2.22
USP11P51784 RNU6-542P-201ENST00000516405 103 ntBASIC1.16□□□□□ -2.22
USP11P51784 RNA5SP94-201ENST00000516917 108 ntBASIC1.16□□□□□ -2.22
USP11P51784 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.16□□□□□ -2.22
USP11P51784 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.16□□□□□ -2.22
USP11P51784 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.15□□□□□ -2.22
USP11P51784 RNU4-38P-201ENST00000364472 129 ntBASIC1.15□□□□□ -2.23
USP11P51784 MTND4LP19-201ENST00000403051 166 ntBASIC1.15□□□□□ -2.23
USP11P51784 RNA5SP268-201ENST00000516828 124 ntBASIC1.15□□□□□ -2.23
USP11P51784 MIR548AE1-201ENST00000583292 70 ntBASIC1.15□□□□□ -2.23
USP11P51784 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.15□□□□□ -2.23
USP11P51784 MIR7107-201ENST00000611489 80 ntBASIC1.15□□□□□ -2.23
USP11P51784 SNORD114-4-201ENST00000363962 75 ntBASIC1.14□□□□□ -2.23
USP11P51784 MIR633-201ENST00000384821 98 ntBASIC1.14□□□□□ -2.23
USP11P51784 MIR652-201ENST00000385278 98 ntBASIC1.14□□□□□ -2.23
USP11P51784 AC022709.1-201ENST00000615967 87 ntBASIC1.14□□□□□ -2.23
USP11P51784 MIR6767-201ENST00000637302 66 ntBASIC1.14□□□□□ -2.23
USP11P51784 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.14□□□□□ -2.23
USP11P51784 RNU6-1089P-201ENST00000516473 104 ntBASIC1.13□□□□□ -2.23
USP11P51784 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
USP11P51784 RNU6-1223P-201ENST00000517124 104 ntBASIC1.12□□□□□ -2.23
USP11P51784 AC103810.9-201ENST00000606688 112 ntBASIC1.12□□□□□ -2.23
USP11P51784 MIR6788-201ENST00000618842 66 ntBASIC1.12□□□□□ -2.23
USP11P51784 Y_RNA.250-201ENST00000364542 110 ntBASIC1.11□□□□□ -2.23
USP11P51784 MIR582-201ENST00000365731 98 ntBASIC1.11□□□□□ -2.23
USP11P51784 RNA5SP299-201ENST00000391203 116 ntBASIC1.11□□□□□ -2.23
USP11P51784 AL157398.1-201ENST00000452981 186 ntBASIC1.11□□□□□ -2.23
USP11P51784 Y_RNA.633-201ENST00000459107 95 ntBASIC1.11□□□□□ -2.23
USP11P51784 MIR151B-201ENST00000584249 96 ntBASIC1.11□□□□□ -2.23
USP11P51784 MIR6515-201ENST00000619843 57 ntBASIC1.11□□□□□ -2.23
USP11P51784 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.11□□□□□ -2.23
USP11P51784 RNY1P8-201ENST00000383970 114 ntBASIC1.1□□□□□ -2.23
USP11P51784 MIR521-2-201ENST00000384818 87 ntBASIC1.1□□□□□ -2.23
USP11P51784 MIR548J-201ENST00000408833 112 ntBASIC1.1□□□□□ -2.23
USP11P51784 SCARNA21.1-201ENST00000515996 128 ntBASIC1.1□□□□□ -2.23
USP11P51784 MIR4752-201ENST00000579672 72 ntBASIC1.1□□□□□ -2.23
USP11P51784 SNORA70.25-201ENST00000612741 95 ntBASIC1.1□□□□□ -2.23
USP11P51784 RNA5SP215-201ENST00000363440 122 ntBASIC1.09□□□□□ -2.23
USP11P51784 SNORA25.5-201ENST00000363782 126 ntBASIC1.09□□□□□ -2.23
USP11P51784 RNA5SP192-201ENST00000364404 120 ntBASIC1.09□□□□□ -2.23
USP11P51784 Y_RNA.407-201ENST00000383986 113 ntBASIC1.09□□□□□ -2.23
USP11P51784 Y_RNA.540-201ENST00000384638 111 ntBASIC1.09□□□□□ -2.23
USP11P51784 SNORD110-201ENST00000408189 75 ntBASIC1.09□□□□□ -2.23
USP11P51784 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.09□□□□□ -2.23
USP11P51784 RNA5SP222-201ENST00000411039 105 ntBASIC1.09□□□□□ -2.23
USP11P51784 SCARNA17.3-201ENST00000516381 125 ntBASIC1.09□□□□□ -2.23
USP11P51784 MIR4473-201ENST00000583731 91 ntBASIC1.09□□□□□ -2.23
USP11P51784 AL353765.1-201ENST00000605514 183 ntBASIC1.09□□□□□ -2.23
USP11P51784 RNU1-29P-201ENST00000606574 126 ntBASIC1.09□□□□□ -2.23
USP11P51784 RNU4-45P-201ENST00000365469 141 ntBASIC1.08□□□□□ -2.24
USP11P51784 RNU6-1162P-201ENST00000384443 104 ntBASIC1.08□□□□□ -2.24
USP11P51784 AC006210.1-201ENST00000424882 111 ntBASIC1.08□□□□□ -2.24
USP11P51784 AC079150.2-201ENST00000443733 78 ntBASIC1.08□□□□□ -2.24
USP11P51784 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.08□□□□□ -2.24
USP11P51784 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC1.08□□□□□ -2.24
USP11P51784 MIR532-201ENST00000385025 91 ntBASIC1.07□□□□□ -2.24
USP11P51784 AC021146.9-201ENST00000512503 156 ntBASIC1.07□□□□□ -2.24
USP11P51784 MIR4661-201ENST00000582720 75 ntBASIC1.07□□□□□ -2.24
USP11P51784 MIR6857-201ENST00000613267 93 ntBASIC1.07□□□□□ -2.24
USP11P51784 SNORA33.1-201ENST00000364957 130 ntBASIC1.06□□□□□ -2.24
USP11P51784 RNU6-987P-201ENST00000384759 104 ntBASIC1.06□□□□□ -2.24
USP11P51784 MIR548E-201ENST00000408287 88 ntBASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 215.2 ms