Protein–RNA interactions for Protein: P48547

KCNC1, Potassium voltage-gated channel subfamily C member 1, humanhuman

Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC1P48547 RNU6-656P-201ENST00000516785 107 ntBASIC1.11□□□□□ -2.23
KCNC1P48547 MIR4460-201ENST00000577862 86 ntBASIC1.11□□□□□ -2.23
KCNC1P48547 AC069503.3-201ENST00000618674 145 ntBASIC1.11□□□□□ -2.23
KCNC1P48547 RNU6-669P-201ENST00000365575 107 ntBASIC1.1□□□□□ -2.23
KCNC1P48547 MIR573-201ENST00000384964 99 ntBASIC1.1□□□□□ -2.23
KCNC1P48547 MIR548L-201ENST00000408303 86 ntBASIC1.1□□□□□ -2.23
KCNC1P48547 FABP5P4-201ENST00000437203 171 ntBASIC1.1□□□□□ -2.23
KCNC1P48547 MTND4LP1-201ENST00000446263 157 ntBASIC1.1□□□□□ -2.23
KCNC1P48547 OR2A41P-201ENST00000473586 105 ntBASIC1.1□□□□□ -2.23
KCNC1P48547 AC092634.7-201ENST00000621022 103 ntBASIC1.1□□□□□ -2.23
KCNC1P48547 SNORA2.1-201ENST00000363089 137 ntBASIC1.09□□□□□ -2.23
KCNC1P48547 RNA5SP484-201ENST00000458857 111 ntBASIC1.09□□□□□ -2.23
KCNC1P48547 MIR6734-201ENST00000621166 68 ntBASIC1.09□□□□□ -2.23
KCNC1P48547 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.08□□□□□ -2.24
KCNC1P48547 RNU6-987P-201ENST00000384759 104 ntBASIC1.08□□□□□ -2.24
KCNC1P48547 MIR7-2-201ENST00000384970 110 ntBASIC1.08□□□□□ -2.24
KCNC1P48547 MIR1285-1-201ENST00000408593 84 ntBASIC1.08□□□□□ -2.24
KCNC1P48547 RNU4-37P-201ENST00000410214 84 ntBASIC1.08□□□□□ -2.24
KCNC1P48547 MIR4661-201ENST00000582720 75 ntBASIC1.08□□□□□ -2.24
KCNC1P48547 snoU13.13-201ENST00000458842 104 ntBASIC1.07□□□□□ -2.24
KCNC1P48547 SCARNA16.5-201ENST00000517114 183 ntBASIC1.07□□□□□ -2.24
KCNC1P48547 MIR6739-201ENST00000622461 75 ntBASIC1.07□□□□□ -2.24
KCNC1P48547 SNORA36.1-201ENST00000363424 132 ntBASIC1.06□□□□□ -2.24
KCNC1P48547 SNORA8.2-201ENST00000384372 139 ntBASIC1.06□□□□□ -2.24
KCNC1P48547 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.06□□□□□ -2.24
KCNC1P48547 RNU6-542P-201ENST00000516405 103 ntBASIC1.06□□□□□ -2.24
KCNC1P48547 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.06□□□□□ -2.24
KCNC1P48547 SNORD114-21-201ENST00000606412 72 ntBASIC1.06□□□□□ -2.24
KCNC1P48547 AL162376.1-201ENST00000624117 175 ntBASIC1.06□□□□□ -2.24
KCNC1P48547 MIR6828-201ENST00000636181 60 ntBASIC1.06□□□□□ -2.24
KCNC1P48547 SNORD114-22-201ENST00000365423 72 ntBASIC1.05□□□□□ -2.24
KCNC1P48547 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
KCNC1P48547 RNA5SP192-201ENST00000364404 120 ntBASIC1.04□□□□□ -2.24
KCNC1P48547 RNA5SP299-201ENST00000391203 116 ntBASIC1.04□□□□□ -2.24
KCNC1P48547 AC079150.2-201ENST00000443733 78 ntBASIC1.04□□□□□ -2.24
KCNC1P48547 MIR4295-201ENST00000585286 85 ntBASIC1.04□□□□□ -2.24
KCNC1P48547 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
KCNC1P48547 MIR18A-201ENST00000362310 71 ntBASIC1.03□□□□□ -2.24
KCNC1P48547 AC087343.1-201ENST00000477341 475 ntBASIC1.03□□□□□ -2.24
KCNC1P48547 RNA5SP255-201ENST00000516370 107 ntBASIC1.03□□□□□ -2.24
KCNC1P48547 RNU6-1089P-201ENST00000516473 104 ntBASIC1.03□□□□□ -2.24
KCNC1P48547 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.03□□□□□ -2.24
KCNC1P48547 SNORA25.5-201ENST00000363782 126 ntBASIC1.02□□□□□ -2.25
KCNC1P48547 SNORD99-201ENST00000408612 74 ntBASIC1.02□□□□□ -2.25
KCNC1P48547 SCARNA21.1-201ENST00000515996 128 ntBASIC1.02□□□□□ -2.25
KCNC1P48547 AC011195.1-201ENST00000578177 177 ntBASIC1.02□□□□□ -2.25
KCNC1P48547 MIR548AE1-201ENST00000583292 70 ntBASIC1.02□□□□□ -2.25
KCNC1P48547 AC103810.9-201ENST00000606688 112 ntBASIC1.02□□□□□ -2.25
KCNC1P48547 RNU6-829P-201ENST00000363700 112 ntBASIC1.01□□□□□ -2.25
KCNC1P48547 RNU1-93P-201ENST00000364704 169 ntBASIC1.01□□□□□ -2.25
KCNC1P48547 Y_RNA.540-201ENST00000384638 111 ntBASIC1.01□□□□□ -2.25
KCNC1P48547 AL157398.1-201ENST00000452981 186 ntBASIC1.01□□□□□ -2.25
KCNC1P48547 AC025627.3-201ENST00000582078 182 ntBASIC1.01□□□□□ -2.25
KCNC1P48547 RNU6-1079P-201ENST00000362861 110 ntBASIC1□□□□□ -2.25
KCNC1P48547 MIR652-201ENST00000385278 98 ntBASIC1□□□□□ -2.25
KCNC1P48547 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1□□□□□ -2.25
KCNC1P48547 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1□□□□□ -2.25
KCNC1P48547 RNU6-1223P-201ENST00000517124 104 ntBASIC1□□□□□ -2.25
KCNC1P48547 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
KCNC1P48547 RNA5SP215-201ENST00000363440 122 ntBASIC0.99□□□□□ -2.25
KCNC1P48547 MIR521-2-201ENST00000384818 87 ntBASIC0.99□□□□□ -2.25
KCNC1P48547 Y_RNA.633-201ENST00000459107 95 ntBASIC0.99□□□□□ -2.25
KCNC1P48547 RNA5SP227-201ENST00000516184 113 ntBASIC0.99□□□□□ -2.25
KCNC1P48547 MIR466-201ENST00000580653 84 ntBASIC0.99□□□□□ -2.25
KCNC1P48547 MIR548V-201ENST00000584165 80 ntBASIC0.99□□□□□ -2.25
KCNC1P48547 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.99□□□□□ -2.25
KCNC1P48547 MIR7107-201ENST00000611489 80 ntBASIC0.99□□□□□ -2.25
KCNC1P48547 AC022709.1-201ENST00000615967 87 ntBASIC0.99□□□□□ -2.25
KCNC1P48547 SNORD114-26-201ENST00000363543 72 ntBASIC0.98□□□□□ -2.25
KCNC1P48547 SNORD114-4-201ENST00000363962 75 ntBASIC0.98□□□□□ -2.25
KCNC1P48547 RNU4-38P-201ENST00000364472 129 ntBASIC0.98□□□□□ -2.25
KCNC1P48547 MIR582-201ENST00000365731 98 ntBASIC0.98□□□□□ -2.25
KCNC1P48547 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
KCNC1P48547 SNORA75.1-201ENST00000391130 148 ntBASIC0.98□□□□□ -2.25
KCNC1P48547 RNA5SP268-201ENST00000516828 124 ntBASIC0.98□□□□□ -2.25
KCNC1P48547 RNA5SP480-201ENST00000516840 109 ntBASIC0.98□□□□□ -2.25
KCNC1P48547 RNA5SP94-201ENST00000516917 108 ntBASIC0.98□□□□□ -2.25
KCNC1P48547 MIR151B-201ENST00000584249 96 ntBASIC0.98□□□□□ -2.25
KCNC1P48547 RNU6-446P-201ENST00000362827 106 ntBASIC0.97□□□□□ -2.25
KCNC1P48547 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.97□□□□□ -2.25
KCNC1P48547 MIR4473-201ENST00000583731 91 ntBASIC0.97□□□□□ -2.25
KCNC1P48547 SNORA70.25-201ENST00000612741 95 ntBASIC0.97□□□□□ -2.25
KCNC1P48547 MIR6788-201ENST00000618842 66 ntBASIC0.97□□□□□ -2.25
KCNC1P48547 MIR6515-201ENST00000619843 57 ntBASIC0.97□□□□□ -2.25
KCNC1P48547 SNORA33.1-201ENST00000364957 130 ntBASIC0.96□□□□□ -2.26
KCNC1P48547 RNU6-1162P-201ENST00000384443 104 ntBASIC0.96□□□□□ -2.26
KCNC1P48547 MIR630-201ENST00000384957 97 ntBASIC0.96□□□□□ -2.26
KCNC1P48547 AC021146.9-201ENST00000512503 156 ntBASIC0.96□□□□□ -2.26
KCNC1P48547 MIR4752-201ENST00000579672 72 ntBASIC0.96□□□□□ -2.26
KCNC1P48547 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.96□□□□□ -2.26
KCNC1P48547 Y_RNA.236-201ENST00000364427 111 ntBASIC0.95□□□□□ -2.26
KCNC1P48547 Y_RNA.250-201ENST00000364542 110 ntBASIC0.95□□□□□ -2.26
KCNC1P48547 RNY1P8-201ENST00000383970 114 ntBASIC0.95□□□□□ -2.26
KCNC1P48547 Y_RNA.407-201ENST00000383986 113 ntBASIC0.95□□□□□ -2.26
KCNC1P48547 MIR548E-201ENST00000408287 88 ntBASIC0.95□□□□□ -2.26
KCNC1P48547 SCARNA17.3-201ENST00000516381 125 ntBASIC0.95□□□□□ -2.26
KCNC1P48547 U2.7-201ENST00000619197 100 ntBASIC0.95□□□□□ -2.26
KCNC1P48547 RNU6-940P-201ENST00000363433 104 ntBASIC0.94□□□□□ -2.26
KCNC1P48547 RNU6-614P-201ENST00000384369 107 ntBASIC0.94□□□□□ -2.26
KCNC1P48547 SNORD110-201ENST00000408189 75 ntBASIC0.94□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 165.2 ms