Protein–RNA interactions for Protein: P35052

GPC1, Glypican-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1P35052 AC006210.1-201ENST00000424882 111 ntBASIC1.4□□□□□ -2.19
GPC1P35052 SNORA31.24-201ENST00000517232 57 ntBASIC1.4□□□□□ -2.19
GPC1P35052 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.39□□□□□ -2.19
GPC1P35052 MIR18A-201ENST00000362310 71 ntBASIC1.39□□□□□ -2.19
GPC1P35052 SNORA25.8-201ENST00000364831 128 ntBASIC1.39□□□□□ -2.19
GPC1P35052 Y_RNA.407-201ENST00000383986 113 ntBASIC1.39□□□□□ -2.19
GPC1P35052 SNORD26-201ENST00000384147 75 ntBASIC1.39□□□□□ -2.19
GPC1P35052 MIR652-201ENST00000385278 98 ntBASIC1.39□□□□□ -2.19
GPC1P35052 AL354695.1-201ENST00000427935 228 ntBASIC1.39□□□□□ -2.19
GPC1P35052 MIR4498-201ENST00000577599 66 ntBASIC1.39□□□□□ -2.19
GPC1P35052 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
GPC1P35052 MIR378A-201ENST00000362177 66 ntBASIC1.38□□□□□ -2.19
GPC1P35052 Y_RNA.164-201ENST00000363709 102 ntBASIC1.38□□□□□ -2.19
GPC1P35052 SNORA33.1-201ENST00000364957 130 ntBASIC1.38□□□□□ -2.19
GPC1P35052 SNORD114-24-201ENST00000365029 72 ntBASIC1.38□□□□□ -2.19
GPC1P35052 SNORD110-201ENST00000408189 75 ntBASIC1.38□□□□□ -2.19
GPC1P35052 SCARNA17.3-201ENST00000516381 125 ntBASIC1.38□□□□□ -2.19
GPC1P35052 Y_RNA.676-201ENST00000516393 96 ntBASIC1.38□□□□□ -2.19
GPC1P35052 RNU6-122P-201ENST00000516818 107 ntBASIC1.38□□□□□ -2.19
GPC1P35052 RNA5SP268-201ENST00000516828 124 ntBASIC1.38□□□□□ -2.19
GPC1P35052 MIR6828-201ENST00000636181 60 ntBASIC1.38□□□□□ -2.19
GPC1P35052 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.38□□□□□ -2.19
GPC1P35052 SNORA36.1-201ENST00000363424 132 ntBASIC1.37□□□□□ -2.19
GPC1P35052 RNU1-42P-201ENST00000364033 160 ntBASIC1.37□□□□□ -2.19
GPC1P35052 MIR150-201ENST00000385048 84 ntBASIC1.37□□□□□ -2.19
GPC1P35052 MIR517B-201ENST00000385102 67 ntBASIC1.37□□□□□ -2.19
GPC1P35052 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.37□□□□□ -2.19
GPC1P35052 MIR3938-201ENST00000582157 103 ntBASIC1.37□□□□□ -2.19
GPC1P35052 MIR548AE1-201ENST00000583292 70 ntBASIC1.37□□□□□ -2.19
GPC1P35052 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC1.37□□□□□ -2.19
GPC1P35052 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.37□□□□□ -2.19
GPC1P35052 SNORD60.1-201ENST00000362451 73 ntBASIC1.36□□□□□ -2.19
GPC1P35052 SNORA63.6-201ENST00000364921 119 ntBASIC1.36□□□□□ -2.19
GPC1P35052 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
GPC1P35052 SNORA15B-2-201ENST00000384058 135 ntBASIC1.36□□□□□ -2.19
GPC1P35052 SNORA15B-1-201ENST00000384334 135 ntBASIC1.36□□□□□ -2.19
GPC1P35052 SNORA67.5-201ENST00000391036 107 ntBASIC1.36□□□□□ -2.19
GPC1P35052 RNA5SP255-201ENST00000516370 107 ntBASIC1.36□□□□□ -2.19
GPC1P35052 snoU13.31-201ENST00000607291 104 ntBASIC1.36□□□□□ -2.19
GPC1P35052 MIR7974-201ENST00000615835 79 ntBASIC1.36□□□□□ -2.19
GPC1P35052 uc_338.10-201ENST00000621872 182 ntBASIC1.36□□□□□ -2.19
GPC1P35052 RNU6-446P-201ENST00000362827 106 ntBASIC1.35□□□□□ -2.19
GPC1P35052 RNU6-939P-201ENST00000384634 107 ntBASIC1.35□□□□□ -2.19
GPC1P35052 SNORD113-2-201ENST00000391082 72 ntBASIC1.35□□□□□ -2.19
GPC1P35052 RNU6-1053P-201ENST00000515930 101 ntBASIC1.35□□□□□ -2.19
GPC1P35052 U2.7-201ENST00000619197 100 ntBASIC1.35□□□□□ -2.19
GPC1P35052 RNA5SP222-201ENST00000411039 105 ntBASIC1.34□□□□□ -2.19
GPC1P35052 AP1B1P2-201ENST00000416196 106 ntBASIC1.34□□□□□ -2.19
GPC1P35052 RNA5SP404-201ENST00000517118 132 ntBASIC1.34□□□□□ -2.19
GPC1P35052 Y_RNA.125-201ENST00000363371 111 ntBASIC1.33□□□□□ -2.2
GPC1P35052 RNA5SP61-201ENST00000516453 100 ntBASIC1.33□□□□□ -2.2
GPC1P35052 RNA5SP94-201ENST00000516917 108 ntBASIC1.33□□□□□ -2.2
GPC1P35052 MIR7107-201ENST00000611489 80 ntBASIC1.33□□□□□ -2.2
GPC1P35052 MIR582-201ENST00000365731 98 ntBASIC1.32□□□□□ -2.2
GPC1P35052 MIR618-201ENST00000385287 98 ntBASIC1.32□□□□□ -2.2
GPC1P35052 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.31□□□□□ -2.2
GPC1P35052 RNU6-698P-201ENST00000363523 107 ntBASIC1.31□□□□□ -2.2
GPC1P35052 RNU6-34P-201ENST00000364874 107 ntBASIC1.31□□□□□ -2.2
GPC1P35052 Y_RNA.633-201ENST00000459107 95 ntBASIC1.31□□□□□ -2.2
GPC1P35052 RNU7-95P-201ENST00000459222 64 ntBASIC1.31□□□□□ -2.2
GPC1P35052 RNU7-174P-201ENST00000516248 59 ntBASIC1.31□□□□□ -2.2
GPC1P35052 MIR4752-201ENST00000579672 72 ntBASIC1.31□□□□□ -2.2
GPC1P35052 MIR548E-201ENST00000408287 88 ntBASIC1.3□□□□□ -2.2
GPC1P35052 SNORA70.25-201ENST00000612741 95 ntBASIC1.3□□□□□ -2.2
GPC1P35052 MIR7978-201ENST00000636158 59 ntBASIC1.3□□□□□ -2.2
GPC1P35052 RNU1-124P-201ENST00000363861 145 ntBASIC1.29□□□□□ -2.2
GPC1P35052 RNU4-45P-201ENST00000365469 141 ntBASIC1.29□□□□□ -2.2
GPC1P35052 RNU6-321P-201ENST00000410912 106 ntBASIC1.29□□□□□ -2.2
GPC1P35052 Y_RNA.722-201ENST00000517279 114 ntBASIC1.29□□□□□ -2.2
GPC1P35052 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.29□□□□□ -2.2
GPC1P35052 U6.96-201ENST00000636425 70 ntBASIC1.29□□□□□ -2.2
GPC1P35052 RNA5SP247-201ENST00000411181 105 ntBASIC1.28□□□□□ -2.2
GPC1P35052 U4.4-201ENST00000620626 117 ntBASIC1.28□□□□□ -2.2
GPC1P35052 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.27□□□□□ -2.21
GPC1P35052 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
GPC1P35052 SNORD113-4-201ENST00000364802 75 ntBASIC1.25□□□□□ -2.21
GPC1P35052 SNORA36.2-201ENST00000384004 127 ntBASIC1.25□□□□□ -2.21
GPC1P35052 RNU6-936P-201ENST00000384005 107 ntBASIC1.25□□□□□ -2.21
GPC1P35052 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
GPC1P35052 TRMT112P2-201ENST00000512910 132 ntBASIC1.24□□□□□ -2.21
GPC1P35052 Y_RNA.246-201ENST00000364495 108 ntBASIC1.23□□□□□ -2.21
GPC1P35052 RNY1P8-201ENST00000383970 114 ntBASIC1.23□□□□□ -2.21
GPC1P35052 CYP3A54P-201ENST00000566950 75 ntBASIC1.23□□□□□ -2.21
GPC1P35052 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
GPC1P35052 SNORA9.1-201ENST00000362412 131 ntBASIC1.22□□□□□ -2.21
GPC1P35052 RNU6-1312P-201ENST00000362425 108 ntBASIC1.22□□□□□ -2.21
GPC1P35052 Y_RNA.226-201ENST00000364337 114 ntBASIC1.22□□□□□ -2.21
GPC1P35052 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.22□□□□□ -2.21
GPC1P35052 AC068338.1-201ENST00000565567 176 ntBASIC1.22□□□□□ -2.21
GPC1P35052 MIR516B1-201ENST00000385211 90 ntBASIC1.21□□□□□ -2.22
GPC1P35052 AL353765.1-201ENST00000605514 183 ntBASIC1.21□□□□□ -2.22
GPC1P35052 Y_RNA.325-201ENST00000365171 122 ntBASIC1.2□□□□□ -2.22
GPC1P35052 RNU6-808P-201ENST00000391233 108 ntBASIC1.2□□□□□ -2.22
GPC1P35052 HMGN2P22-201ENST00000427588 175 ntBASIC1.2□□□□□ -2.22
GPC1P35052 AC069271.1-201ENST00000445577 156 ntBASIC1.2□□□□□ -2.22
GPC1P35052 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.2□□□□□ -2.22
GPC1P35052 MIR4421-201ENST00000578133 69 ntBASIC1.2□□□□□ -2.22
GPC1P35052 MIR8070-201ENST00000616510 88 ntBASIC1.2□□□□□ -2.22
GPC1P35052 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
GPC1P35052 Y_RNA.327-201ENST00000365201 102 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 189.5 ms