Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 RNU2-59P-201ENST00000410482 191 ntBASIC0.71□□□□□ -2.3
HOXC12P31275 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.71□□□□□ -2.3
HOXC12P31275 Y_RNA.681-201ENST00000516445 113 ntBASIC0.71□□□□□ -2.3
HOXC12P31275 RNU5B-6P-201ENST00000516765 68 ntBASIC0.71□□□□□ -2.3
HOXC12P31275 AC018659.1-201ENST00000551083 169 ntBASIC0.71□□□□□ -2.3
HOXC12P31275 YWHAEP2-201ENST00000580066 112 ntBASIC0.71□□□□□ -2.3
HOXC12P31275 YWHAEP3-201ENST00000582767 121 ntBASIC0.71□□□□□ -2.3
HOXC12P31275 RNU6-351P-201ENST00000516097 100 ntBASIC0.7□□□□□ -2.3
HOXC12P31275 SNORA70.25-201ENST00000612741 95 ntBASIC0.7□□□□□ -2.3
HOXC12P31275 AC069503.3-201ENST00000618674 145 ntBASIC0.7□□□□□ -2.3
HOXC12P31275 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
HOXC12P31275 RNU6-1094P-201ENST00000362416 104 ntBASIC0.69□□□□□ -2.3
HOXC12P31275 RNU6-824P-201ENST00000363724 104 ntBASIC0.69□□□□□ -2.3
HOXC12P31275 RNU6-54P-201ENST00000365563 107 ntBASIC0.69□□□□□ -2.3
HOXC12P31275 Y_RNA.423-201ENST00000384057 113 ntBASIC0.69□□□□□ -2.3
HOXC12P31275 AC098934.3-201ENST00000430450 190 ntBASIC0.69□□□□□ -2.3
HOXC12P31275 MIR4773-1-201ENST00000637203 78 ntBASIC0.69□□□□□ -2.3
HOXC12P31275 Y_RNA.68-201ENST00000362881 102 ntBASIC0.68□□□□□ -2.3
HOXC12P31275 RNU6-1275P-201ENST00000391087 107 ntBASIC0.68□□□□□ -2.3
HOXC12P31275 RNA5SP121-201ENST00000516537 101 ntBASIC0.68□□□□□ -2.3
HOXC12P31275 RNA5SP330-201ENST00000517096 96 ntBASIC0.68□□□□□ -2.3
HOXC12P31275 MIR6835-201ENST00000621552 64 ntBASIC0.68□□□□□ -2.3
HOXC12P31275 RNU6-340P-201ENST00000364005 107 ntBASIC0.67□□□□□ -2.3
HOXC12P31275 RNU6-681P-201ENST00000364012 104 ntBASIC0.67□□□□□ -2.3
HOXC12P31275 Y_RNA.258-201ENST00000364613 105 ntBASIC0.66□□□□□ -2.3
HOXC12P31275 RNU6-382P-201ENST00000365181 106 ntBASIC0.66□□□□□ -2.3
HOXC12P31275 SNORA2A-201ENST00000383885 135 ntBASIC0.66□□□□□ -2.3
HOXC12P31275 RNU6-279P-201ENST00000391297 101 ntBASIC0.66□□□□□ -2.3
HOXC12P31275 Y_RNA.606-201ENST00000410579 103 ntBASIC0.66□□□□□ -2.3
HOXC12P31275 RNU6-857P-201ENST00000515893 110 ntBASIC0.66□□□□□ -2.3
HOXC12P31275 RNU6-229P-201ENST00000516614 102 ntBASIC0.66□□□□□ -2.3
HOXC12P31275 AL109933.3-201ENST00000619095 188 ntBASIC0.66□□□□□ -2.3
HOXC12P31275 RNU6-495P-201ENST00000362995 107 ntBASIC0.65□□□□□ -2.31
HOXC12P31275 RNA5SP193-201ENST00000410353 107 ntBASIC0.65□□□□□ -2.31
HOXC12P31275 U6.81-201ENST00000612550 106 ntBASIC0.65□□□□□ -2.31
HOXC12P31275 Y_RNA.433-201ENST00000384089 102 ntBASIC0.64□□□□□ -2.31
HOXC12P31275 RNU6-24P-201ENST00000384440 107 ntBASIC0.64□□□□□ -2.31
HOXC12P31275 MIR508-201ENST00000384857 115 ntBASIC0.64□□□□□ -2.31
HOXC12P31275 RNU6-303P-201ENST00000517091 106 ntBASIC0.64□□□□□ -2.31
HOXC12P31275 MIR4711-201ENST00000578274 70 ntBASIC0.64□□□□□ -2.31
HOXC12P31275 MIR5706-201ENST00000579841 80 ntBASIC0.64□□□□□ -2.31
HOXC12P31275 MIR4473-201ENST00000583731 91 ntBASIC0.64□□□□□ -2.31
HOXC12P31275 RNU1-29P-201ENST00000606574 126 ntBASIC0.64□□□□□ -2.31
HOXC12P31275 DLEU2_3.2-201ENST00000612883 73 ntBASIC0.64□□□□□ -2.31
HOXC12P31275 SNORD75.2-201ENST00000408784 58 ntBASIC0.63□□□□□ -2.31
HOXC12P31275 RNU6-274P-201ENST00000459566 107 ntBASIC0.63□□□□□ -2.31
HOXC12P31275 RNA5SP395-201ENST00000516567 118 ntBASIC0.63□□□□□ -2.31
HOXC12P31275 MIR4484-201ENST00000582855 83 ntBASIC0.63□□□□□ -2.31
HOXC12P31275 MIR8087-201ENST00000612745 78 ntBASIC0.63□□□□□ -2.31
HOXC12P31275 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.63□□□□□ -2.31
HOXC12P31275 SNORD44.1-201ENST00000363202 61 ntBASIC0.62□□□□□ -2.31
HOXC12P31275 RNU6-807P-201ENST00000516805 107 ntBASIC0.62□□□□□ -2.31
HOXC12P31275 MIR330-201ENST00000362196 94 ntBASIC0.61□□□□□ -2.31
HOXC12P31275 RNA5SP347-201ENST00000362445 119 ntBASIC0.61□□□□□ -2.31
HOXC12P31275 RNA5SP257-201ENST00000363023 116 ntBASIC0.61□□□□□ -2.31
HOXC12P31275 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.61□□□□□ -2.31
HOXC12P31275 RNU7-24P-201ENST00000458867 62 ntBASIC0.61□□□□□ -2.31
HOXC12P31275 SNORD42B-201ENST00000458893 67 ntBASIC0.61□□□□□ -2.31
HOXC12P31275 MIR6755-201ENST00000619993 66 ntBASIC0.61□□□□□ -2.31
HOXC12P31275 MIR1297-201ENST00000637311 77 ntBASIC0.61□□□□□ -2.31
HOXC12P31275 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.61□□□□□ -2.31
HOXC12P31275 SNORA68.3-201ENST00000515906 83 ntBASIC0.6□□□□□ -2.31
HOXC12P31275 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.6□□□□□ -2.31
HOXC12P31275 Y_RNA.407-201ENST00000383986 113 ntBASIC0.59□□□□□ -2.31
HOXC12P31275 Y_RNA.532-201ENST00000384590 113 ntBASIC0.59□□□□□ -2.31
HOXC12P31275 HMGN2P22-201ENST00000427588 175 ntBASIC0.59□□□□□ -2.31
HOXC12P31275 AL691482.2-201ENST00000457453 84 ntBASIC0.59□□□□□ -2.31
HOXC12P31275 RNU6-1232P-201ENST00000516299 86 ntBASIC0.59□□□□□ -2.31
HOXC12P31275 U7.6-201ENST00000610841 64 ntBASIC0.59□□□□□ -2.31
HOXC12P31275 uc_338.10-201ENST00000621872 182 ntBASIC0.59□□□□□ -2.31
HOXC12P31275 SNORD114-4-201ENST00000363962 75 ntBASIC0.58□□□□□ -2.32
HOXC12P31275 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.58□□□□□ -2.32
HOXC12P31275 RNU6-848P-201ENST00000515948 107 ntBASIC0.58□□□□□ -2.32
HOXC12P31275 RNU6-863P-201ENST00000515989 104 ntBASIC0.58□□□□□ -2.32
HOXC12P31275 RNU6-617P-201ENST00000516147 107 ntBASIC0.58□□□□□ -2.32
HOXC12P31275 RNU6-473P-201ENST00000516164 107 ntBASIC0.58□□□□□ -2.32
HOXC12P31275 RNU6-1049P-201ENST00000516414 107 ntBASIC0.58□□□□□ -2.32
HOXC12P31275 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
HOXC12P31275 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.58□□□□□ -2.32
HOXC12P31275 Y_RNA.244-201ENST00000364484 109 ntBASIC0.57□□□□□ -2.32
HOXC12P31275 MIR760-201ENST00000390220 80 ntBASIC0.57□□□□□ -2.32
HOXC12P31275 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.57□□□□□ -2.32
HOXC12P31275 AC074348.1-201ENST00000426503 132 ntBASIC0.57□□□□□ -2.32
HOXC12P31275 MIR103A1-201ENST00000362165 78 ntBASIC0.56□□□□□ -2.32
HOXC12P31275 Y_RNA.125-201ENST00000363371 111 ntBASIC0.56□□□□□ -2.32
HOXC12P31275 RNU6-154P-201ENST00000384306 106 ntBASIC0.56□□□□□ -2.32
HOXC12P31275 MIR548AE1-201ENST00000583292 70 ntBASIC0.56□□□□□ -2.32
HOXC12P31275 AC243829.3-201ENST00000622177 108 ntBASIC0.56□□□□□ -2.32
HOXC12P31275 RNU6-330P-201ENST00000363015 107 ntBASIC0.55□□□□□ -2.32
HOXC12P31275 MIR652-201ENST00000385278 98 ntBASIC0.55□□□□□ -2.32
HOXC12P31275 MIR1197-201ENST00000408818 88 ntBASIC0.55□□□□□ -2.32
HOXC12P31275 SCARNA18B-201ENST00000458806 135 ntBASIC0.55□□□□□ -2.32
HOXC12P31275 MIR6509-201ENST00000614603 85 ntBASIC0.55□□□□□ -2.32
HOXC12P31275 U7.4-201ENST00000614961 63 ntBASIC0.55□□□□□ -2.32
HOXC12P31275 uc_338.17-201ENST00000619633 179 ntBASIC0.55□□□□□ -2.32
HOXC12P31275 MIRLET7D-201ENST00000362263 87 ntBASIC0.54□□□□□ -2.32
HOXC12P31275 RNU6-1039P-201ENST00000383931 107 ntBASIC0.54□□□□□ -2.32
HOXC12P31275 SNORA8.1-201ENST00000384250 140 ntBASIC0.54□□□□□ -2.32
HOXC12P31275 RNU7-129P-201ENST00000516128 62 ntBASIC0.54□□□□□ -2.32
HOXC12P31275 RNU6-638P-201ENST00000516582 104 ntBASIC0.54□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 249 ms