Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 RNU6-930P-201ENST00000390938 100 ntBASIC1.12□□□□□ -2.23
LMO1P25800 SNORD41.1-201ENST00000391000 69 ntBASIC1.12□□□□□ -2.23
LMO1P25800 AL591704.2-201ENST00000421658 181 ntBASIC1.12□□□□□ -2.23
LMO1P25800 RNU6-231P-201ENST00000517122 103 ntBASIC1.12□□□□□ -2.23
LMO1P25800 SNORA70.22-201ENST00000517160 124 ntBASIC1.12□□□□□ -2.23
LMO1P25800 uc_338.10-201ENST00000621872 182 ntBASIC1.12□□□□□ -2.23
LMO1P25800 RNU4-33P-201ENST00000364316 85 ntBASIC1.11□□□□□ -2.23
LMO1P25800 RNU6-910P-201ENST00000390844 107 ntBASIC1.11□□□□□ -2.23
LMO1P25800 MIR938-201ENST00000401216 83 ntBASIC1.11□□□□□ -2.23
LMO1P25800 RNU6-955P-201ENST00000410497 104 ntBASIC1.11□□□□□ -2.23
LMO1P25800 SNORD79.1-201ENST00000516069 84 ntBASIC1.11□□□□□ -2.23
LMO1P25800 AL136317.1-201ENST00000612653 226 ntBASIC1.11□□□□□ -2.23
LMO1P25800 RNU6-520P-201ENST00000384717 104 ntBASIC1.1□□□□□ -2.23
LMO1P25800 MIR545-201ENST00000385085 106 ntBASIC1.1□□□□□ -2.23
LMO1P25800 MIR644A-201ENST00000385262 94 ntBASIC1.1□□□□□ -2.23
LMO1P25800 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.1□□□□□ -2.23
LMO1P25800 RNU7-21P-201ENST00000459430 62 ntBASIC1.1□□□□□ -2.23
LMO1P25800 SNORA25-201ENST00000384384 134 ntBASIC1.09□□□□□ -2.23
LMO1P25800 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.09□□□□□ -2.23
LMO1P25800 RNU5B-6P-201ENST00000516765 68 ntBASIC1.09□□□□□ -2.23
LMO1P25800 RNA5SP102-201ENST00000516865 106 ntBASIC1.09□□□□□ -2.23
LMO1P25800 MIR3660-201ENST00000584845 100 ntBASIC1.09□□□□□ -2.23
LMO1P25800 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.08□□□□□ -2.24
LMO1P25800 RNA5SP327-201ENST00000362494 101 ntBASIC1.08□□□□□ -2.24
LMO1P25800 Y_RNA.125-201ENST00000363371 111 ntBASIC1.08□□□□□ -2.24
LMO1P25800 RNU6-726P-201ENST00000364680 107 ntBASIC1.08□□□□□ -2.24
LMO1P25800 RNU6-364P-201ENST00000384387 107 ntBASIC1.08□□□□□ -2.24
LMO1P25800 MIR517B-201ENST00000385102 67 ntBASIC1.08□□□□□ -2.24
LMO1P25800 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
LMO1P25800 SNORD111-201ENST00000408139 94 ntBASIC1.08□□□□□ -2.24
LMO1P25800 RNU7-90P-201ENST00000459216 62 ntBASIC1.08□□□□□ -2.24
LMO1P25800 MIR548AE1-201ENST00000583292 70 ntBASIC1.08□□□□□ -2.24
LMO1P25800 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC1.08□□□□□ -2.24
LMO1P25800 RMST_2.1-201ENST00000617263 136 ntBASIC1.08□□□□□ -2.24
LMO1P25800 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC1.08□□□□□ -2.24
LMO1P25800 SNORA9.1-201ENST00000362412 131 ntBASIC1.07□□□□□ -2.24
LMO1P25800 RNU6-986P-201ENST00000363133 102 ntBASIC1.07□□□□□ -2.24
LMO1P25800 RNU1-141P-201ENST00000364623 158 ntBASIC1.07□□□□□ -2.24
LMO1P25800 RNU6-302P-201ENST00000365249 107 ntBASIC1.07□□□□□ -2.24
LMO1P25800 RNU6-1250P-201ENST00000391218 107 ntBASIC1.07□□□□□ -2.24
LMO1P25800 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.06□□□□□ -2.24
LMO1P25800 SNORD28-201ENST00000384706 75 ntBASIC1.06□□□□□ -2.24
LMO1P25800 MIR216B-201ENST00000390186 82 ntBASIC1.06□□□□□ -2.24
LMO1P25800 RNU6-269P-201ENST00000391077 97 ntBASIC1.06□□□□□ -2.24
LMO1P25800 MIR548E-201ENST00000408287 88 ntBASIC1.06□□□□□ -2.24
LMO1P25800 RNA5SP484-201ENST00000458857 111 ntBASIC1.06□□□□□ -2.24
LMO1P25800 AC002350.1-201ENST00000490759 375 ntBASIC1.06□□□□□ -2.24
LMO1P25800 AC244669.1-204ENST00000621564 178 ntBASIC1.06□□□□□ -2.24
LMO1P25800 RNU6-924P-201ENST00000362926 108 ntBASIC1.05□□□□□ -2.24
LMO1P25800 Y_RNA.250-201ENST00000364542 110 ntBASIC1.05□□□□□ -2.24
LMO1P25800 MIR19B1-201ENST00000384829 87 ntBASIC1.05□□□□□ -2.24
LMO1P25800 MIR548X-201ENST00000580069 75 ntBASIC1.05□□□□□ -2.24
LMO1P25800 AC067863.3-201ENST00000624172 122 ntBASIC1.05□□□□□ -2.24
LMO1P25800 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
LMO1P25800 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
LMO1P25800 SNORD18A-201ENST00000363753 72 ntBASIC1.04□□□□□ -2.24
LMO1P25800 Y_RNA.246-201ENST00000364495 108 ntBASIC1.04□□□□□ -2.24
LMO1P25800 Y_RNA.282-201ENST00000364793 102 ntBASIC1.04□□□□□ -2.24
LMO1P25800 MIR548C-201ENST00000384815 97 ntBASIC1.04□□□□□ -2.24
LMO1P25800 MIR222-201ENST00000384992 110 ntBASIC1.04□□□□□ -2.24
LMO1P25800 MIR1827-201ENST00000408549 66 ntBASIC1.04□□□□□ -2.24
LMO1P25800 AC002429.1-201ENST00000437672 148 ntBASIC1.04□□□□□ -2.24
LMO1P25800 RNA5SP47-201ENST00000517230 109 ntBASIC1.04□□□□□ -2.24
LMO1P25800 MIR4490-201ENST00000582647 84 ntBASIC1.04□□□□□ -2.24
LMO1P25800 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
LMO1P25800 RNU6-838P-201ENST00000363399 108 ntBASIC1.03□□□□□ -2.24
LMO1P25800 SNORD114-22-201ENST00000365423 72 ntBASIC1.03□□□□□ -2.24
LMO1P25800 RNU6-1162P-201ENST00000384443 104 ntBASIC1.03□□□□□ -2.24
LMO1P25800 SNORD116-16-201ENST00000384533 92 ntBASIC1.03□□□□□ -2.24
LMO1P25800 MIR520F-201ENST00000384824 87 ntBASIC1.03□□□□□ -2.24
LMO1P25800 MIR652-201ENST00000385278 98 ntBASIC1.03□□□□□ -2.24
LMO1P25800 RNU1-119P-201ENST00000391122 165 ntBASIC1.03□□□□□ -2.24
LMO1P25800 AC021146.9-201ENST00000512503 156 ntBASIC1.03□□□□□ -2.24
LMO1P25800 MIR4460-201ENST00000577862 86 ntBASIC1.03□□□□□ -2.24
LMO1P25800 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
LMO1P25800 MIR26B-201ENST00000362251 77 ntBASIC1.02□□□□□ -2.25
LMO1P25800 SNORD1B-201ENST00000363091 84 ntBASIC1.02□□□□□ -2.25
LMO1P25800 Y_RNA.174-201ENST00000363781 105 ntBASIC1.02□□□□□ -2.25
LMO1P25800 SNORA25.8-201ENST00000364831 128 ntBASIC1.02□□□□□ -2.25
LMO1P25800 MIR618-201ENST00000385287 98 ntBASIC1.02□□□□□ -2.25
LMO1P25800 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.02□□□□□ -2.25
LMO1P25800 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
LMO1P25800 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.01□□□□□ -2.25
LMO1P25800 RNU1-124P-201ENST00000363861 145 ntBASIC1.01□□□□□ -2.25
LMO1P25800 RNU6-810P-201ENST00000364001 107 ntBASIC1.01□□□□□ -2.25
LMO1P25800 SNORD116.2-201ENST00000391251 93 ntBASIC1.01□□□□□ -2.25
LMO1P25800 U7.7-201ENST00000459276 60 ntBASIC1.01□□□□□ -2.25
LMO1P25800 MIR4639-201ENST00000584938 69 ntBASIC1.01□□□□□ -2.25
LMO1P25800 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.01□□□□□ -2.25
LMO1P25800 AL162376.1-201ENST00000624117 175 ntBASIC1.01□□□□□ -2.25
LMO1P25800 RNU6-716P-201ENST00000365621 103 ntBASIC1□□□□□ -2.25
LMO1P25800 SNORA40B-201ENST00000385573 128 ntBASIC1□□□□□ -2.25
LMO1P25800 RNA5SP404-201ENST00000517118 132 ntBASIC1□□□□□ -2.25
LMO1P25800 CYP3A54P-201ENST00000566950 75 ntBASIC1□□□□□ -2.25
LMO1P25800 RNU1-29P-201ENST00000606574 126 ntBASIC1□□□□□ -2.25
LMO1P25800 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1□□□□□ -2.25
LMO1P25800 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.99□□□□□ -2.25
LMO1P25800 RNU6-939P-201ENST00000384634 107 ntBASIC0.99□□□□□ -2.25
LMO1P25800 MIR200A-201ENST00000384875 90 ntBASIC0.99□□□□□ -2.25
LMO1P25800 MIR519A2-201ENST00000384990 87 ntBASIC0.99□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 230.7 ms