Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 RNU6-184P-201ENST00000516514 107 ntBASIC0.1□□□□□ -2.39
COL5A1P20908 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.1□□□□□ -2.39
COL5A1P20908 MIR3925-201ENST00000584674 77 ntBASIC0.1□□□□□ -2.39
COL5A1P20908 MIR548Z-201ENST00000584743 97 ntBASIC0.1□□□□□ -2.39
COL5A1P20908 SNORA63.2-201ENST00000362603 126 ntBASIC0.09□□□□□ -2.39
COL5A1P20908 Y_RNA.495-201ENST00000384435 112 ntBASIC0.09□□□□□ -2.39
COL5A1P20908 MIR604-201ENST00000384880 94 ntBASIC0.09□□□□□ -2.39
COL5A1P20908 MIR610-201ENST00000385139 96 ntBASIC0.09□□□□□ -2.39
COL5A1P20908 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.09□□□□□ -2.39
COL5A1P20908 SNORA75.1-201ENST00000391130 148 ntBASIC0.09□□□□□ -2.39
COL5A1P20908 U3.27-201ENST00000391237 200 ntBASIC0.09□□□□□ -2.39
COL5A1P20908 snoU13.17-201ENST00000458802 104 ntBASIC0.09□□□□□ -2.39
COL5A1P20908 RNU7-24P-201ENST00000458867 62 ntBASIC0.09□□□□□ -2.39
COL5A1P20908 RNU6-168P-201ENST00000516189 101 ntBASIC0.09□□□□□ -2.39
COL5A1P20908 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.09□□□□□ -2.39
COL5A1P20908 MIR101-1-201ENST00000362265 75 ntBASIC0.08□□□□□ -2.4
COL5A1P20908 RNU6-495P-201ENST00000362995 107 ntBASIC0.08□□□□□ -2.4
COL5A1P20908 RNU4-32P-201ENST00000363404 141 ntBASIC0.08□□□□□ -2.4
COL5A1P20908 RNA5SP128-201ENST00000365305 116 ntBASIC0.08□□□□□ -2.4
COL5A1P20908 MIR1236-201ENST00000408340 102 ntBASIC0.08□□□□□ -2.4
COL5A1P20908 AC006210.1-201ENST00000424882 111 ntBASIC0.08□□□□□ -2.4
COL5A1P20908 RNU7-159P-201ENST00000459284 62 ntBASIC0.08□□□□□ -2.4
COL5A1P20908 RNA5SP227-201ENST00000516184 113 ntBASIC0.08□□□□□ -2.4
COL5A1P20908 RNU6-162P-201ENST00000516228 103 ntBASIC0.08□□□□□ -2.4
COL5A1P20908 SCARNA11.2-201ENST00000517183 154 ntBASIC0.08□□□□□ -2.4
COL5A1P20908 RNU6-640P-201ENST00000363693 105 ntBASIC0.08□□□□□ -2.4
COL5A1P20908 RNU6-1051P-201ENST00000365471 102 ntBASIC0.08□□□□□ -2.4
COL5A1P20908 Y_RNA.371-201ENST00000365591 113 ntBASIC0.08□□□□□ -2.4
COL5A1P20908 MIR1295A-201ENST00000408463 79 ntBASIC0.08□□□□□ -2.4
COL5A1P20908 Y_RNA.620-201ENST00000411009 88 ntBASIC0.08□□□□□ -2.4
COL5A1P20908 RNU5B-6P-201ENST00000516765 68 ntBASIC0.08□□□□□ -2.4
COL5A1P20908 YWHAEP2-201ENST00000580066 112 ntBASIC0.08□□□□□ -2.4
COL5A1P20908 MIR4743-201ENST00000584576 69 ntBASIC0.08□□□□□ -2.4
COL5A1P20908 MIR4768-201ENST00000585270 74 ntBASIC0.08□□□□□ -2.4
COL5A1P20908 MALAT1.1-201ENST00000618249 95 ntBASIC0.08□□□□□ -2.4
COL5A1P20908 RNU6-681P-201ENST00000364012 104 ntBASIC0.07□□□□□ -2.4
COL5A1P20908 MIR106A-201ENST00000384870 81 ntBASIC0.07□□□□□ -2.4
COL5A1P20908 RNU6-1177P-201ENST00000391058 104 ntBASIC0.07□□□□□ -2.4
COL5A1P20908 RNA5SP484-201ENST00000458857 111 ntBASIC0.07□□□□□ -2.4
COL5A1P20908 RNU7-129P-201ENST00000516128 62 ntBASIC0.07□□□□□ -2.4
COL5A1P20908 SNORA18.5-201ENST00000516616 101 ntBASIC0.07□□□□□ -2.4
COL5A1P20908 SNORA42.1-201ENST00000363515 137 ntBASIC0.06□□□□□ -2.4
COL5A1P20908 SNORD114-29-201ENST00000364819 70 ntBASIC0.06□□□□□ -2.4
COL5A1P20908 RNU6-979P-201ENST00000383896 107 ntBASIC0.06□□□□□ -2.4
COL5A1P20908 RNU6-675P-201ENST00000384236 104 ntBASIC0.06□□□□□ -2.4
COL5A1P20908 MIR450A2-201ENST00000385022 100 ntBASIC0.06□□□□□ -2.4
COL5A1P20908 Y_RNA.609-201ENST00000410669 89 ntBASIC0.06□□□□□ -2.4
COL5A1P20908 AC026421.1-201ENST00000519101 163 ntBASIC0.06□□□□□ -2.4
COL5A1P20908 MIR4796-201ENST00000580742 81 ntBASIC0.06□□□□□ -2.4
COL5A1P20908 MIR4473-201ENST00000583731 91 ntBASIC0.06□□□□□ -2.4
COL5A1P20908 MIR4723-201ENST00000585070 81 ntBASIC0.06□□□□□ -2.4
COL5A1P20908 MIR548O2-201ENST00000616090 70 ntBASIC0.06□□□□□ -2.4
COL5A1P20908 MIR499B-201ENST00000636498 73 ntBASIC0.06□□□□□ -2.4
COL5A1P20908 RNU6-633P-201ENST00000362612 103 ntBASIC0.06□□□□□ -2.4
COL5A1P20908 RNY1P1-201ENST00000364372 112 ntBASIC0.06□□□□□ -2.4
COL5A1P20908 RNU6-294P-201ENST00000364999 102 ntBASIC0.06□□□□□ -2.4
COL5A1P20908 RNU6-652P-201ENST00000365488 107 ntBASIC0.06□□□□□ -2.4
COL5A1P20908 RNU6-815P-201ENST00000384080 113 ntBASIC0.06□□□□□ -2.4
COL5A1P20908 RNU6-49P-201ENST00000384256 107 ntBASIC0.06□□□□□ -2.4
COL5A1P20908 MIR593-201ENST00000384856 100 ntBASIC0.06□□□□□ -2.4
COL5A1P20908 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.06□□□□□ -2.4
COL5A1P20908 Y_RNA.660-201ENST00000516002 120 ntBASIC0.06□□□□□ -2.4
COL5A1P20908 RNU6-1232P-201ENST00000516299 86 ntBASIC0.06□□□□□ -2.4
COL5A1P20908 SCARNA17.3-201ENST00000516381 125 ntBASIC0.06□□□□□ -2.4
COL5A1P20908 MIR3064-201ENST00000581130 66 ntBASIC0.06□□□□□ -2.4
COL5A1P20908 RNU5F-1-201ENST00000362507 117 ntBASIC0.05□□□□□ -2.4
COL5A1P20908 Y_RNA.81-201ENST00000362997 102 ntBASIC0.05□□□□□ -2.4
COL5A1P20908 SNORD114-16-201ENST00000363044 70 ntBASIC0.05□□□□□ -2.4
COL5A1P20908 RNU6-46P-201ENST00000383860 107 ntBASIC0.05□□□□□ -2.4
COL5A1P20908 RNU6-267P-201ENST00000516714 103 ntBASIC0.05□□□□□ -2.4
COL5A1P20908 CR383656.4-201ENST00000546909 122 ntBASIC0.05□□□□□ -2.4
COL5A1P20908 AC140658.3-201ENST00000567603 271 ntBASIC0.05□□□□□ -2.4
COL5A1P20908 U7.6-201ENST00000610841 64 ntBASIC0.05□□□□□ -2.4
COL5A1P20908 AC084368.1-201ENST00000620935 65 ntBASIC0.05□□□□□ -2.4
COL5A1P20908 RNU6-1298P-201ENST00000362456 101 ntBASIC0.04□□□□□ -2.4
COL5A1P20908 Y_RNA.437-201ENST00000384113 113 ntBASIC0.04□□□□□ -2.4
COL5A1P20908 Y_RNA.457-201ENST00000384237 111 ntBASIC0.04□□□□□ -2.4
COL5A1P20908 MIR145-201ENST00000384967 88 ntBASIC0.04□□□□□ -2.4
COL5A1P20908 Y_RNA.611-201ENST00000410682 108 ntBASIC0.04□□□□□ -2.4
COL5A1P20908 RNU7-188P-201ENST00000517063 64 ntBASIC0.04□□□□□ -2.4
COL5A1P20908 RNU6-844P-201ENST00000517175 102 ntBASIC0.04□□□□□ -2.4
COL5A1P20908 MIR4460-201ENST00000577862 86 ntBASIC0.04□□□□□ -2.4
COL5A1P20908 MIR5582-201ENST00000579697 68 ntBASIC0.04□□□□□ -2.4
COL5A1P20908 YWHAEP3-201ENST00000582767 121 ntBASIC0.04□□□□□ -2.4
COL5A1P20908 DLEU2_3.2-201ENST00000612883 73 ntBASIC0.04□□□□□ -2.4
COL5A1P20908 MIR6739-201ENST00000622461 75 ntBASIC0.04□□□□□ -2.4
COL5A1P20908 RNY1P7-201ENST00000384743 110 ntBASIC0.03□□□□□ -2.4
COL5A1P20908 SNORD75.2-201ENST00000408784 58 ntBASIC0.03□□□□□ -2.4
COL5A1P20908 MIR1468-201ENST00000410600 86 ntBASIC0.03□□□□□ -2.4
COL5A1P20908 RN7SKP12-201ENST00000516275 143 ntBASIC0.03□□□□□ -2.4
COL5A1P20908 MIR4752-201ENST00000579672 72 ntBASIC0.03□□□□□ -2.4
COL5A1P20908 MIR3140-201ENST00000583685 90 ntBASIC0.03□□□□□ -2.4
COL5A1P20908 MIR6509-201ENST00000614603 85 ntBASIC0.03□□□□□ -2.4
COL5A1P20908 RNA5SP163-201ENST00000410304 99 ntBASIC0.03□□□□□ -2.4
COL5A1P20908 Y_RNA.610-201ENST00000410681 103 ntBASIC0.03□□□□□ -2.4
COL5A1P20908 RPS29P8-201ENST00000445109 171 ntBASIC0.03□□□□□ -2.4
COL5A1P20908 RNU6-180P-201ENST00000516697 61 ntBASIC0.03□□□□□ -2.4
COL5A1P20908 RNU6-175P-201ENST00000516896 107 ntBASIC0.03□□□□□ -2.4
COL5A1P20908 MIR4290-201ENST00000583807 95 ntBASIC0.03□□□□□ -2.4
COL5A1P20908 MIR488-201ENST00000365739 83 ntBASIC0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 177.5 ms