Protein–RNA interactions for Protein: P19438

TNFRSF1A, Tumor necrosis factor receptor superfamily member 1A, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1AP19438 AC244669.1-204ENST00000621564 178 ntBASIC1.18□□□□□ -2.22
TNFRSF1AP19438 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.17□□□□□ -2.22
TNFRSF1AP19438 SNORD28-201ENST00000384706 75 ntBASIC1.17□□□□□ -2.22
TNFRSF1AP19438 RNU6-520P-201ENST00000384717 104 ntBASIC1.17□□□□□ -2.22
TNFRSF1AP19438 RNU7-95P-201ENST00000459222 64 ntBASIC1.17□□□□□ -2.22
TNFRSF1AP19438 AC002350.1-201ENST00000490759 375 ntBASIC1.17□□□□□ -2.22
TNFRSF1AP19438 AC021146.9-201ENST00000512503 156 ntBASIC1.17□□□□□ -2.22
TNFRSF1AP19438 RNU5B-6P-201ENST00000516765 68 ntBASIC1.17□□□□□ -2.22
TNFRSF1AP19438 MIR4421-201ENST00000578133 69 ntBASIC1.17□□□□□ -2.22
TNFRSF1AP19438 RNU1-141P-201ENST00000364623 158 ntBASIC1.16□□□□□ -2.22
TNFRSF1AP19438 RNU6-726P-201ENST00000364680 107 ntBASIC1.16□□□□□ -2.22
TNFRSF1AP19438 MIR548L-201ENST00000408303 86 ntBASIC1.16□□□□□ -2.22
TNFRSF1AP19438 TRMT112P2-201ENST00000512910 132 ntBASIC1.16□□□□□ -2.22
TNFRSF1AP19438 SNORD114-4-201ENST00000363962 75 ntBASIC1.15□□□□□ -2.23
TNFRSF1AP19438 RNU6-135P-201ENST00000516769 101 ntBASIC1.15□□□□□ -2.23
TNFRSF1AP19438 uc_338.10-201ENST00000621872 182 ntBASIC1.15□□□□□ -2.23
TNFRSF1AP19438 SNORA33.1-201ENST00000364957 130 ntBASIC1.14□□□□□ -2.23
TNFRSF1AP19438 RNU6-716P-201ENST00000365621 103 ntBASIC1.14□□□□□ -2.23
TNFRSF1AP19438 RNA5SP404-201ENST00000517118 132 ntBASIC1.14□□□□□ -2.23
TNFRSF1AP19438 MIR7974-201ENST00000615835 79 ntBASIC1.14□□□□□ -2.23
TNFRSF1AP19438 MIR8070-201ENST00000616510 88 ntBASIC1.14□□□□□ -2.23
TNFRSF1AP19438 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.14□□□□□ -2.23
TNFRSF1AP19438 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC1.14□□□□□ -2.23
TNFRSF1AP19438 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
TNFRSF1AP19438 Y_RNA.125-201ENST00000363371 111 ntBASIC1.13□□□□□ -2.23
TNFRSF1AP19438 SNORD18A-201ENST00000363753 72 ntBASIC1.13□□□□□ -2.23
TNFRSF1AP19438 SNORA41B-201ENST00000384785 128 ntBASIC1.13□□□□□ -2.23
TNFRSF1AP19438 AC002429.1-201ENST00000437672 148 ntBASIC1.13□□□□□ -2.23
TNFRSF1AP19438 RNA5SP484-201ENST00000458857 111 ntBASIC1.13□□□□□ -2.23
TNFRSF1AP19438 Y_RNA.633-201ENST00000459107 95 ntBASIC1.13□□□□□ -2.23
TNFRSF1AP19438 RNU6-469P-201ENST00000516253 101 ntBASIC1.13□□□□□ -2.23
TNFRSF1AP19438 RNU6-980P-201ENST00000516925 103 ntBASIC1.13□□□□□ -2.23
TNFRSF1AP19438 RNU1-124P-201ENST00000363861 145 ntBASIC1.12□□□□□ -2.23
TNFRSF1AP19438 MIR758-201ENST00000390227 88 ntBASIC1.12□□□□□ -2.23
TNFRSF1AP19438 RNU6-269P-201ENST00000391077 97 ntBASIC1.12□□□□□ -2.23
TNFRSF1AP19438 RNA5SP47-201ENST00000517230 109 ntBASIC1.12□□□□□ -2.23
TNFRSF1AP19438 DLEU2_4.2-201ENST00000616613 58 ntBASIC1.12□□□□□ -2.23
TNFRSF1AP19438 MIR7111-201ENST00000619751 72 ntBASIC1.12□□□□□ -2.23
TNFRSF1AP19438 AL353770.2-201ENST00000620024 78 ntBASIC1.12□□□□□ -2.23
TNFRSF1AP19438 SNORA15B-2-201ENST00000384058 135 ntBASIC1.11□□□□□ -2.23
TNFRSF1AP19438 SNORA15B-1-201ENST00000384334 135 ntBASIC1.11□□□□□ -2.23
TNFRSF1AP19438 RNU6-35P-201ENST00000384530 107 ntBASIC1.11□□□□□ -2.23
TNFRSF1AP19438 MIR19B1-201ENST00000384829 87 ntBASIC1.11□□□□□ -2.23
TNFRSF1AP19438 RNU6-1246P-201ENST00000391064 107 ntBASIC1.11□□□□□ -2.23
TNFRSF1AP19438 SNORA63.6-201ENST00000364921 119 ntBASIC1.1□□□□□ -2.23
TNFRSF1AP19438 Y_RNA.325-201ENST00000365171 122 ntBASIC1.1□□□□□ -2.23
TNFRSF1AP19438 SNORA8.2-201ENST00000384372 139 ntBASIC1.1□□□□□ -2.23
TNFRSF1AP19438 MIR499A-201ENST00000384903 122 ntBASIC1.1□□□□□ -2.23
TNFRSF1AP19438 RNU7-119P-201ENST00000459279 63 ntBASIC1.1□□□□□ -2.23
TNFRSF1AP19438 RNU6-231P-201ENST00000517122 103 ntBASIC1.1□□□□□ -2.23
TNFRSF1AP19438 MIR6078-201ENST00000611069 100 ntBASIC1.1□□□□□ -2.23
TNFRSF1AP19438 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC1.1□□□□□ -2.23
TNFRSF1AP19438 Y_RNA.118-201ENST00000363300 101 ntBASIC1.09□□□□□ -2.23
TNFRSF1AP19438 Y_RNA.246-201ENST00000364495 108 ntBASIC1.09□□□□□ -2.23
TNFRSF1AP19438 MIR582-201ENST00000365731 98 ntBASIC1.09□□□□□ -2.23
TNFRSF1AP19438 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.09□□□□□ -2.23
TNFRSF1AP19438 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.08□□□□□ -2.24
TNFRSF1AP19438 SNORA9.1-201ENST00000362412 131 ntBASIC1.08□□□□□ -2.24
TNFRSF1AP19438 Y_RNA.327-201ENST00000365201 102 ntBASIC1.08□□□□□ -2.24
TNFRSF1AP19438 MIR652-201ENST00000385278 98 ntBASIC1.08□□□□□ -2.24
TNFRSF1AP19438 SCARNA17.3-201ENST00000516381 125 ntBASIC1.08□□□□□ -2.24
TNFRSF1AP19438 RNA5SP61-201ENST00000516453 100 ntBASIC1.08□□□□□ -2.24
TNFRSF1AP19438 MIR3660-201ENST00000584845 100 ntBASIC1.08□□□□□ -2.24
TNFRSF1AP19438 SNORD89-201ENST00000390981 114 ntBASIC1.07□□□□□ -2.24
TNFRSF1AP19438 MIR548E-201ENST00000408287 88 ntBASIC1.07□□□□□ -2.24
TNFRSF1AP19438 SCARNA16.5-201ENST00000517114 183 ntBASIC1.07□□□□□ -2.24
TNFRSF1AP19438 MIR3678-201ENST00000578455 94 ntBASIC1.07□□□□□ -2.24
TNFRSF1AP19438 MIR548AE1-201ENST00000583292 70 ntBASIC1.07□□□□□ -2.24
TNFRSF1AP19438 AL162376.1-201ENST00000624117 175 ntBASIC1.07□□□□□ -2.24
TNFRSF1AP19438 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
TNFRSF1AP19438 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.06□□□□□ -2.24
TNFRSF1AP19438 Y_RNA.407-201ENST00000383986 113 ntBASIC1.06□□□□□ -2.24
TNFRSF1AP19438 SNORD105-201ENST00000386910 85 ntBASIC1.06□□□□□ -2.24
TNFRSF1AP19438 U7.7-201ENST00000459276 60 ntBASIC1.06□□□□□ -2.24
TNFRSF1AP19438 OR2A41P-201ENST00000473586 105 ntBASIC1.06□□□□□ -2.24
TNFRSF1AP19438 SNORA40.16-201ENST00000517238 121 ntBASIC1.06□□□□□ -2.24
TNFRSF1AP19438 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.06□□□□□ -2.24
TNFRSF1AP19438 RNU4-33P-201ENST00000364316 85 ntBASIC1.05□□□□□ -2.24
TNFRSF1AP19438 RNU6-930P-201ENST00000390938 100 ntBASIC1.05□□□□□ -2.24
TNFRSF1AP19438 SNORD116.2-201ENST00000391251 93 ntBASIC1.05□□□□□ -2.24
TNFRSF1AP19438 RNU6-1110P-201ENST00000516462 101 ntBASIC1.05□□□□□ -2.24
TNFRSF1AP19438 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.05□□□□□ -2.24
TNFRSF1AP19438 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.05□□□□□ -2.24
TNFRSF1AP19438 Y_RNA.224-201ENST00000364308 111 ntBASIC1.04□□□□□ -2.24
TNFRSF1AP19438 Y_RNA.355-201ENST00000365462 98 ntBASIC1.04□□□□□ -2.24
TNFRSF1AP19438 SNORD116-16-201ENST00000384533 92 ntBASIC1.04□□□□□ -2.24
TNFRSF1AP19438 MIR200A-201ENST00000384875 90 ntBASIC1.04□□□□□ -2.24
TNFRSF1AP19438 SNORD124-201ENST00000459577 104 ntBASIC1.04□□□□□ -2.24
TNFRSF1AP19438 MIR3612-201ENST00000579753 87 ntBASIC1.04□□□□□ -2.24
TNFRSF1AP19438 MIR4473-201ENST00000583731 91 ntBASIC1.04□□□□□ -2.24
TNFRSF1AP19438 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
TNFRSF1AP19438 RNU6-392P-201ENST00000364926 101 ntBASIC1.03□□□□□ -2.24
TNFRSF1AP19438 MIR573-201ENST00000384964 99 ntBASIC1.03□□□□□ -2.24
TNFRSF1AP19438 CYP3A54P-201ENST00000566950 75 ntBASIC1.03□□□□□ -2.24
TNFRSF1AP19438 AC090617.8-201ENST00000623339 167 ntBASIC1.03□□□□□ -2.24
TNFRSF1AP19438 SNORD114-24-201ENST00000365029 72 ntBASIC1.02□□□□□ -2.25
TNFRSF1AP19438 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
TNFRSF1AP19438 RNU6ATAC29P-201ENST00000408088 125 ntBASIC1.02□□□□□ -2.25
TNFRSF1AP19438 MIR548F3-201ENST00000408509 87 ntBASIC1.02□□□□□ -2.25
TNFRSF1AP19438 RNU6-518P-201ENST00000516056 96 ntBASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 175.5 ms