Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 RNA5SP292-201ENST00000390974 118 ntBASIC-1.92□□□□□ -2.72
HLA-DQB2P05538 MIR548Z-201ENST00000584743 97 ntBASIC-1.92□□□□□ -2.72
HLA-DQB2P05538 SNORA2.1-201ENST00000363089 137 ntBASIC-1.93□□□□□ -2.72
HLA-DQB2P05538 RNA5SP331-201ENST00000364986 107 ntBASIC-1.93□□□□□ -2.72
HLA-DQB2P05538 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.93□□□□□ -2.72
HLA-DQB2P05538 SNX3P1X-201ENST00000414887 175 ntBASIC-1.93□□□□□ -2.72
HLA-DQB2P05538 SNORD4B-201ENST00000459083 72 ntBASIC-1.93□□□□□ -2.72
HLA-DQB2P05538 RNU6-1333P-201ENST00000516162 93 ntBASIC-1.93□□□□□ -2.72
HLA-DQB2P05538 RNU6-62P-201ENST00000516526 102 ntBASIC-1.93□□□□□ -2.72
HLA-DQB2P05538 MIR4694-201ENST00000578534 80 ntBASIC-1.93□□□□□ -2.72
HLA-DQB2P05538 MIR3657-201ENST00000584818 117 ntBASIC-1.93□□□□□ -2.72
HLA-DQB2P05538 RNA5SP26-201ENST00000362406 119 ntBASIC-1.94□□□□□ -2.72
HLA-DQB2P05538 Y_RNA.162-201ENST00000363683 102 ntBASIC-1.94□□□□□ -2.72
HLA-DQB2P05538 RNY3P14-201ENST00000384309 102 ntBASIC-1.94□□□□□ -2.72
HLA-DQB2P05538 RNA5SP461-201ENST00000516451 104 ntBASIC-1.94□□□□□ -2.72
HLA-DQB2P05538 MIR198-201ENST00000637333 62 ntBASIC-1.94□□□□□ -2.72
HLA-DQB2P05538 RNU6-832P-201ENST00000363319 107 ntBASIC-1.95□□□□□ -2.72
HLA-DQB2P05538 RNU6-151P-201ENST00000364158 107 ntBASIC-1.95□□□□□ -2.72
HLA-DQB2P05538 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-1.95□□□□□ -2.72
HLA-DQB2P05538 MTATP6P29-201ENST00000415057 132 ntBASIC-1.95□□□□□ -2.72
HLA-DQB2P05538 AC091912.2-201ENST00000624798 167 ntBASIC-1.95□□□□□ -2.72
HLA-DQB2P05538 RNU6-824P-201ENST00000363724 104 ntBASIC-1.96□□□□□ -2.72
HLA-DQB2P05538 RNU6-644P-201ENST00000391155 98 ntBASIC-1.96□□□□□ -2.72
HLA-DQB2P05538 MIR548F4-201ENST00000408515 105 ntBASIC-1.96□□□□□ -2.72
HLA-DQB2P05538 MIR548I1-201ENST00000408810 149 ntBASIC-1.96□□□□□ -2.72
HLA-DQB2P05538 RNU7-154P-201ENST00000516194 62 ntBASIC-1.96□□□□□ -2.72
HLA-DQB2P05538 SNORA18.5-201ENST00000516616 101 ntBASIC-1.96□□□□□ -2.72
HLA-DQB2P05538 AC103810.7-201ENST00000607821 91 ntBASIC-1.96□□□□□ -2.72
HLA-DQB2P05538 RNU6-519P-201ENST00000410590 108 ntBASIC-1.97□□□□□ -2.72
HLA-DQB2P05538 AL691482.2-201ENST00000457453 84 ntBASIC-1.97□□□□□ -2.72
HLA-DQB2P05538 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.97□□□□□ -2.72
HLA-DQB2P05538 MIR4520-1-201ENST00000582609 70 ntBASIC-1.97□□□□□ -2.72
HLA-DQB2P05538 MIR6874-201ENST00000635894 71 ntBASIC-1.97□□□□□ -2.72
HLA-DQB2P05538 Y_RNA.200-201ENST00000364018 102 ntBASIC-1.98□□□□□ -2.73
HLA-DQB2P05538 RNU6-80P-201ENST00000384195 107 ntBASIC-1.98□□□□□ -2.73
HLA-DQB2P05538 MIR519A2-201ENST00000384990 87 ntBASIC-1.98□□□□□ -2.73
HLA-DQB2P05538 MIR4439-201ENST00000583746 80 ntBASIC-1.98□□□□□ -2.73
HLA-DQB2P05538 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.98□□□□□ -2.73
HLA-DQB2P05538 RNY3P2-201ENST00000362918 102 ntBASIC-1.99□□□□□ -2.73
HLA-DQB2P05538 RNU6-164P-201ENST00000364604 103 ntBASIC-1.99□□□□□ -2.73
HLA-DQB2P05538 Y_RNA.488-201ENST00000384403 102 ntBASIC-1.99□□□□□ -2.73
HLA-DQB2P05538 AL158147.1-201ENST00000443970 75 ntBASIC-1.99□□□□□ -2.73
HLA-DQB2P05538 RNU6-518P-201ENST00000516056 96 ntBASIC-1.99□□□□□ -2.73
HLA-DQB2P05538 RNU6-1153P-201ENST00000516760 105 ntBASIC-1.99□□□□□ -2.73
HLA-DQB2P05538 Y_RNA.720-201ENST00000517166 92 ntBASIC-1.99□□□□□ -2.73
HLA-DQB2P05538 MIR3613-201ENST00000579844 87 ntBASIC-1.99□□□□□ -2.73
HLA-DQB2P05538 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-1.99□□□□□ -2.73
HLA-DQB2P05538 AC141273.2-201ENST00000618989 130 ntBASIC-1.99□□□□□ -2.73
HLA-DQB2P05538 Y_RNA.11-201ENST00000362375 109 ntBASIC-2□□□□□ -2.73
HLA-DQB2P05538 RNU5F-1-201ENST00000362507 117 ntBASIC-2□□□□□ -2.73
HLA-DQB2P05538 Y_RNA.478-201ENST00000384358 107 ntBASIC-2□□□□□ -2.73
HLA-DQB2P05538 AL078595.1-201ENST00000404458 226 ntBASIC-2□□□□□ -2.73
HLA-DQB2P05538 AC025166.1-201ENST00000612411 163 ntBASIC-2□□□□□ -2.73
HLA-DQB2P05538 Y_RNA.232-201ENST00000364369 96 ntBASIC-2.01□□□□□ -2.73
HLA-DQB2P05538 Y_RNA.309-201ENST00000365046 111 ntBASIC-2.01□□□□□ -2.73
HLA-DQB2P05538 RNU6-813P-201ENST00000384691 107 ntBASIC-2.01□□□□□ -2.73
HLA-DQB2P05538 MIR521-2-201ENST00000384818 87 ntBASIC-2.01□□□□□ -2.73
HLA-DQB2P05538 RNU6-732P-201ENST00000516033 103 ntBASIC-2.01□□□□□ -2.73
HLA-DQB2P05538 RNU6-111P-201ENST00000517179 105 ntBASIC-2.01□□□□□ -2.73
HLA-DQB2P05538 MIR4490-201ENST00000582647 84 ntBASIC-2.01□□□□□ -2.73
HLA-DQB2P05538 AL627230.5-201ENST00000619807 58 ntBASIC-2.01□□□□□ -2.73
HLA-DQB2P05538 RNU6-1216P-201ENST00000362590 107 ntBASIC-2.02□□□□□ -2.73
HLA-DQB2P05538 Y_RNA.181-201ENST00000363872 101 ntBASIC-2.02□□□□□ -2.73
HLA-DQB2P05538 SNORD45B-201ENST00000364617 72 ntBASIC-2.02□□□□□ -2.73
HLA-DQB2P05538 Y_RNA.467-201ENST00000384297 102 ntBASIC-2.02□□□□□ -2.73
HLA-DQB2P05538 Y_RNA.558-201ENST00000384685 113 ntBASIC-2.02□□□□□ -2.73
HLA-DQB2P05538 RNU6-1135P-201ENST00000411083 103 ntBASIC-2.02□□□□□ -2.73
HLA-DQB2P05538 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-2.02□□□□□ -2.73
HLA-DQB2P05538 MTCYBP6-201ENST00000441810 138 ntBASIC-2.02□□□□□ -2.73
HLA-DQB2P05538 SNORA81.3-201ENST00000517283 198 ntBASIC-2.02□□□□□ -2.73
HLA-DQB2P05538 MIR3128-201ENST00000581957 66 ntBASIC-2.02□□□□□ -2.73
HLA-DQB2P05538 Y_RNA.47-201ENST00000362697 108 ntBASIC-2.03□□□□□ -2.73
HLA-DQB2P05538 Y_RNA.188-201ENST00000363952 111 ntBASIC-2.03□□□□□ -2.73
HLA-DQB2P05538 Y_RNA.535-201ENST00000384612 99 ntBASIC-2.03□□□□□ -2.73
HLA-DQB2P05538 MIR513C-201ENST00000401352 84 ntBASIC-2.03□□□□□ -2.73
HLA-DQB2P05538 SNORA19.1-201ENST00000410656 129 ntBASIC-2.03□□□□□ -2.73
HLA-DQB2P05538 MTND3P2-201ENST00000438452 342 ntBASIC-2.03□□□□□ -2.73
HLA-DQB2P05538 RNU7-88P-201ENST00000458752 63 ntBASIC-2.03□□□□□ -2.73
HLA-DQB2P05538 AP001340.1-201ENST00000624405 217 ntBASIC-2.03□□□□□ -2.73
HLA-DQB2P05538 MIR5683-201ENST00000636514 76 ntBASIC-2.03□□□□□ -2.73
HLA-DQB2P05538 Y_RNA.95-201ENST00000363079 95 ntBASIC-2.04□□□□□ -2.74
HLA-DQB2P05538 Y_RNA.350-201ENST00000365409 98 ntBASIC-2.04□□□□□ -2.74
HLA-DQB2P05538 Y_RNA.563-201ENST00000384707 108 ntBASIC-2.04□□□□□ -2.74
HLA-DQB2P05538 AP002795.1-201ENST00000534879 84 ntBASIC-2.04□□□□□ -2.74
HLA-DQB2P05538 DLEU2_3.2-201ENST00000612883 73 ntBASIC-2.04□□□□□ -2.74
HLA-DQB2P05538 MIR1246-201ENST00000636535 73 ntBASIC-2.04□□□□□ -2.74
HLA-DQB2P05538 Y_RNA.272-201ENST00000364696 102 ntBASIC-2.05□□□□□ -2.74
HLA-DQB2P05538 RPL35AP4-201ENST00000412007 102 ntBASIC-2.05□□□□□ -2.74
HLA-DQB2P05538 RNU6-1061P-201ENST00000516530 99 ntBASIC-2.05□□□□□ -2.74
HLA-DQB2P05538 AC072026.1-201ENST00000605023 201 ntBASIC-2.05□□□□□ -2.74
HLA-DQB2P05538 MIR6129-201ENST00000616087 109 ntBASIC-2.05□□□□□ -2.74
HLA-DQB2P05538 MIR6502-201ENST00000617296 76 ntBASIC-2.05□□□□□ -2.74
HLA-DQB2P05538 AL035470.1-201ENST00000622571 220 ntBASIC-2.05□□□□□ -2.74
HLA-DQB2P05538 Y_RNA.348-201ENST00000365403 103 ntBASIC-2.06□□□□□ -2.74
HLA-DQB2P05538 MIR601-201ENST00000385256 79 ntBASIC-2.06□□□□□ -2.74
HLA-DQB2P05538 MIR1285-2-201ENST00000408311 88 ntBASIC-2.06□□□□□ -2.74
HLA-DQB2P05538 Y_RNA.680-201ENST00000516441 93 ntBASIC-2.06□□□□□ -2.74
HLA-DQB2P05538 Y_RNA.700-201ENST00000516806 100 ntBASIC-2.06□□□□□ -2.74
HLA-DQB2P05538 Y_RNA.778-201ENST00000620203 90 ntBASIC-2.06□□□□□ -2.74
HLA-DQB2P05538 Y_RNA.240-201ENST00000364469 95 ntBASIC-2.07□□□□□ -2.74
Retrieved 100 of 98,524 protein–RNA pairs in 206.7 ms