Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 MIR4439-201ENST00000583746 80 ntBASIC-0.75□□□□□ -2.53
HLA-DQA1P01909 SNORA63.2-201ENST00000362603 126 ntBASIC-0.76□□□□□ -2.53
HLA-DQA1P01909 Y_RNA.95-201ENST00000363079 95 ntBASIC-0.76□□□□□ -2.53
HLA-DQA1P01909 RNU6-431P-201ENST00000383874 107 ntBASIC-0.76□□□□□ -2.53
HLA-DQA1P01909 RNU6-644P-201ENST00000391155 98 ntBASIC-0.76□□□□□ -2.53
HLA-DQA1P01909 RNU6-346P-201ENST00000516288 111 ntBASIC-0.76□□□□□ -2.53
HLA-DQA1P01909 MIR3681-201ENST00000580089 72 ntBASIC-0.76□□□□□ -2.53
HLA-DQA1P01909 MIR3064-201ENST00000581130 66 ntBASIC-0.76□□□□□ -2.53
HLA-DQA1P01909 RNU4-36P-201ENST00000364294 144 ntBASIC-0.77□□□□□ -2.53
HLA-DQA1P01909 SNORD45B-201ENST00000364617 72 ntBASIC-0.77□□□□□ -2.53
HLA-DQA1P01909 Y_RNA.343-201ENST00000365354 112 ntBASIC-0.77□□□□□ -2.53
HLA-DQA1P01909 RNU6-813P-201ENST00000384691 107 ntBASIC-0.77□□□□□ -2.53
HLA-DQA1P01909 Y_RNA.563-201ENST00000384707 108 ntBASIC-0.77□□□□□ -2.53
HLA-DQA1P01909 MIR224-201ENST00000384889 81 ntBASIC-0.77□□□□□ -2.53
HLA-DQA1P01909 RNA5SP292-201ENST00000390974 118 ntBASIC-0.77□□□□□ -2.53
HLA-DQA1P01909 SNORD4B-201ENST00000459083 72 ntBASIC-0.77□□□□□ -2.53
HLA-DQA1P01909 RNU6-971P-201ENST00000516920 106 ntBASIC-0.77□□□□□ -2.53
HLA-DQA1P01909 MIR4464-201ENST00000580818 92 ntBASIC-0.77□□□□□ -2.53
HLA-DQA1P01909 SNORA63.6-201ENST00000364921 119 ntBASIC-0.78□□□□□ -2.53
HLA-DQA1P01909 SNORD64-201ENST00000386683 67 ntBASIC-0.78□□□□□ -2.53
HLA-DQA1P01909 MT-TQ-201ENST00000387372 72 ntBASIC-0.78□□□□□ -2.53
HLA-DQA1P01909 MIR548U-201ENST00000390728 81 ntBASIC-0.78□□□□□ -2.53
HLA-DQA1P01909 SNORA13-201ENST00000458790 133 ntBASIC-0.78□□□□□ -2.53
HLA-DQA1P01909 MIR4777-201ENST00000583710 86 ntBASIC-0.78□□□□□ -2.53
HLA-DQA1P01909 SNORD95.1-201ENST00000364099 68 ntBASIC-0.79□□□□□ -2.54
HLA-DQA1P01909 MIR124-2-201ENST00000385081 109 ntBASIC-0.79□□□□□ -2.54
HLA-DQA1P01909 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.79□□□□□ -2.54
HLA-DQA1P01909 AC104996.3-201ENST00000590718 94 ntBASIC-0.79□□□□□ -2.54
HLA-DQA1P01909 MIR3914-2-201ENST00000637339 95 ntBASIC-0.79□□□□□ -2.54
HLA-DQA1P01909 SNORD33.1-201ENST00000516213 88 ntBASIC-0.8□□□□□ -2.54
HLA-DQA1P01909 RNU6-795P-201ENST00000516323 103 ntBASIC-0.8□□□□□ -2.54
HLA-DQA1P01909 RNU6-255P-201ENST00000516957 105 ntBASIC-0.8□□□□□ -2.54
HLA-DQA1P01909 SNORD74.6-201ENST00000364796 70 ntBASIC-0.81□□□□□ -2.54
HLA-DQA1P01909 RNU6-1051P-201ENST00000365471 102 ntBASIC-0.81□□□□□ -2.54
HLA-DQA1P01909 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.81□□□□□ -2.54
HLA-DQA1P01909 Y_RNA.506-201ENST00000384494 102 ntBASIC-0.81□□□□□ -2.54
HLA-DQA1P01909 RNU6-1177P-201ENST00000391058 104 ntBASIC-0.81□□□□□ -2.54
HLA-DQA1P01909 RNU4-63P-201ENST00000411313 118 ntBASIC-0.81□□□□□ -2.54
HLA-DQA1P01909 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-0.81□□□□□ -2.54
HLA-DQA1P01909 MIR6888-201ENST00000621977 67 ntBASIC-0.81□□□□□ -2.54
HLA-DQA1P01909 Y_RNA.464-201ENST00000384282 110 ntBASIC-0.82□□□□□ -2.54
HLA-DQA1P01909 MIR147A-201ENST00000385079 72 ntBASIC-0.82□□□□□ -2.54
HLA-DQA1P01909 RNU6-519P-201ENST00000410590 108 ntBASIC-0.82□□□□□ -2.54
HLA-DQA1P01909 RNA5SP25-201ENST00000410815 110 ntBASIC-0.82□□□□□ -2.54
HLA-DQA1P01909 snoU13.17-201ENST00000458802 104 ntBASIC-0.82□□□□□ -2.54
HLA-DQA1P01909 Y_RNA.712-201ENST00000517011 92 ntBASIC-0.82□□□□□ -2.54
HLA-DQA1P01909 AC012531.4-201ENST00000616509 177 ntBASIC-0.82□□□□□ -2.54
HLA-DQA1P01909 snoR1.1-201ENST00000628177 80 ntBASIC-0.82□□□□□ -2.54
HLA-DQA1P01909 RNU6-208P-201ENST00000362431 107 ntBASIC-0.83□□□□□ -2.54
HLA-DQA1P01909 RNU6-382P-201ENST00000365181 106 ntBASIC-0.83□□□□□ -2.54
HLA-DQA1P01909 MIR548A3-201ENST00000385297 97 ntBASIC-0.83□□□□□ -2.54
HLA-DQA1P01909 Y_RNA.586-201ENST00000391146 98 ntBASIC-0.83□□□□□ -2.54
HLA-DQA1P01909 SNORD18.2-201ENST00000459604 70 ntBASIC-0.83□□□□□ -2.54
HLA-DQA1P01909 AC021146.9-201ENST00000512503 156 ntBASIC-0.83□□□□□ -2.54
HLA-DQA1P01909 RNU6-1212P-201ENST00000517023 104 ntBASIC-0.83□□□□□ -2.54
HLA-DQA1P01909 YWHAEP3-201ENST00000582767 121 ntBASIC-0.83□□□□□ -2.54
HLA-DQA1P01909 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.83□□□□□ -2.54
HLA-DQA1P01909 RNU6-1290P-201ENST00000362957 109 ntBASIC-0.84□□□□□ -2.54
HLA-DQA1P01909 RNU6-824P-201ENST00000363724 104 ntBASIC-0.84□□□□□ -2.54
HLA-DQA1P01909 Y_RNA.180-201ENST00000363867 113 ntBASIC-0.84□□□□□ -2.54
HLA-DQA1P01909 SNORD114-17-201ENST00000364699 75 ntBASIC-0.84□□□□□ -2.54
HLA-DQA1P01909 Y_RNA.433-201ENST00000384089 102 ntBASIC-0.84□□□□□ -2.54
HLA-DQA1P01909 RNU6-80P-201ENST00000384195 107 ntBASIC-0.84□□□□□ -2.54
HLA-DQA1P01909 MIR203A-201ENST00000384836 110 ntBASIC-0.84□□□□□ -2.54
HLA-DQA1P01909 SNORD75.2-201ENST00000408784 58 ntBASIC-0.84□□□□□ -2.54
HLA-DQA1P01909 RNA5SP147-201ENST00000516493 109 ntBASIC-0.84□□□□□ -2.54
HLA-DQA1P01909 SNORA18.5-201ENST00000516616 101 ntBASIC-0.84□□□□□ -2.54
HLA-DQA1P01909 MIR382-201ENST00000637119 76 ntBASIC-0.84□□□□□ -2.54
HLA-DQA1P01909 MIR6086-201ENST00000638065 55 ntBASIC-0.84□□□□□ -2.54
HLA-DQA1P01909 Y_RNA.10-201ENST00000362371 110 ntBASIC-0.85□□□□□ -2.55
HLA-DQA1P01909 SNORA33.1-201ENST00000364957 130 ntBASIC-0.85□□□□□ -2.55
HLA-DQA1P01909 RNU7-24P-201ENST00000458867 62 ntBASIC-0.85□□□□□ -2.55
HLA-DQA1P01909 RNU6-659P-201ENST00000516454 104 ntBASIC-0.85□□□□□ -2.55
HLA-DQA1P01909 MIR4499-201ENST00000584834 69 ntBASIC-0.85□□□□□ -2.55
HLA-DQA1P01909 AL353803.5-201ENST00000599815 141 ntBASIC-0.85□□□□□ -2.55
HLA-DQA1P01909 AC090425.1-201ENST00000610007 140 ntBASIC-0.85□□□□□ -2.55
HLA-DQA1P01909 AL445584.3-201ENST00000617173 78 ntBASIC-0.85□□□□□ -2.55
HLA-DQA1P01909 U6.96-201ENST00000636425 70 ntBASIC-0.85□□□□□ -2.55
HLA-DQA1P01909 Y_RNA.218-201ENST00000364218 104 ntBASIC-0.86□□□□□ -2.55
HLA-DQA1P01909 RNY1P7-201ENST00000384743 110 ntBASIC-0.86□□□□□ -2.55
HLA-DQA1P01909 SNORD83B-201ENST00000386745 93 ntBASIC-0.86□□□□□ -2.55
HLA-DQA1P01909 RNU6-62P-201ENST00000516526 102 ntBASIC-0.86□□□□□ -2.55
HLA-DQA1P01909 RNA5SP395-201ENST00000516567 118 ntBASIC-0.86□□□□□ -2.55
HLA-DQA1P01909 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.86□□□□□ -2.55
HLA-DQA1P01909 U6.95-201ENST00000636931 70 ntBASIC-0.86□□□□□ -2.55
HLA-DQA1P01909 RNY4P3-201ENST00000365254 95 ntBASIC-0.87□□□□□ -2.55
HLA-DQA1P01909 RNY1P5-201ENST00000383890 115 ntBASIC-0.87□□□□□ -2.55
HLA-DQA1P01909 RNU6-1014P-201ENST00000383940 103 ntBASIC-0.87□□□□□ -2.55
HLA-DQA1P01909 RNU6-260P-201ENST00000384092 107 ntBASIC-0.87□□□□□ -2.55
HLA-DQA1P01909 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.87□□□□□ -2.55
HLA-DQA1P01909 RNU6-907P-201ENST00000390924 102 ntBASIC-0.87□□□□□ -2.55
HLA-DQA1P01909 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.87□□□□□ -2.55
HLA-DQA1P01909 SNORA19.1-201ENST00000410656 129 ntBASIC-0.87□□□□□ -2.55
HLA-DQA1P01909 Y_RNA.71-201ENST00000362892 104 ntBASIC-0.88□□□□□ -2.55
HLA-DQA1P01909 Y_RNA.281-201ENST00000364774 94 ntBASIC-0.88□□□□□ -2.55
HLA-DQA1P01909 SNORD58A-201ENST00000383875 65 ntBASIC-0.88□□□□□ -2.55
HLA-DQA1P01909 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-0.88□□□□□ -2.55
HLA-DQA1P01909 MTATP6P29-201ENST00000415057 132 ntBASIC-0.88□□□□□ -2.55
HLA-DQA1P01909 SCARNA18B-201ENST00000458806 135 ntBASIC-0.88□□□□□ -2.55
HLA-DQA1P01909 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.88□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 306.7 ms