Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 RNU6-520P-201ENST00000384717 104 ntBASIC1.78□□□□□ -2.12
ALDH1A1P00352 RNU5B-6P-201ENST00000516765 68 ntBASIC1.78□□□□□ -2.12
ALDH1A1P00352 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
ALDH1A1P00352 SNORD12-201ENST00000391002 90 ntBASIC1.77□□□□□ -2.13
ALDH1A1P00352 Y_RNA.633-201ENST00000459107 95 ntBASIC1.77□□□□□ -2.13
ALDH1A1P00352 RNA5SP47-201ENST00000517230 109 ntBASIC1.77□□□□□ -2.13
ALDH1A1P00352 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.77□□□□□ -2.13
ALDH1A1P00352 SNORD18A-201ENST00000363753 72 ntBASIC1.76□□□□□ -2.13
ALDH1A1P00352 MIR548L-201ENST00000408303 86 ntBASIC1.76□□□□□ -2.13
ALDH1A1P00352 SNORA70.22-201ENST00000517160 124 ntBASIC1.76□□□□□ -2.13
ALDH1A1P00352 Y_RNA.379-201ENST00000365653 102 ntBASIC1.75□□□□□ -2.13
ALDH1A1P00352 RNU6-269P-201ENST00000391077 97 ntBASIC1.75□□□□□ -2.13
ALDH1A1P00352 RNU6-469P-201ENST00000516253 101 ntBASIC1.75□□□□□ -2.13
ALDH1A1P00352 MIR548AD-201ENST00000584780 82 ntBASIC1.75□□□□□ -2.13
ALDH1A1P00352 AC022709.1-201ENST00000615967 87 ntBASIC1.75□□□□□ -2.13
ALDH1A1P00352 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC1.75□□□□□ -2.13
ALDH1A1P00352 SNORA8.2-201ENST00000384372 139 ntBASIC1.74□□□□□ -2.13
ALDH1A1P00352 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.74□□□□□ -2.13
ALDH1A1P00352 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
ALDH1A1P00352 SNORA15B-2-201ENST00000384058 135 ntBASIC1.73□□□□□ -2.13
ALDH1A1P00352 SNORA15B-1-201ENST00000384334 135 ntBASIC1.73□□□□□ -2.13
ALDH1A1P00352 MIR1323-201ENST00000408090 73 ntBASIC1.73□□□□□ -2.13
ALDH1A1P00352 AC002429.1-201ENST00000437672 148 ntBASIC1.73□□□□□ -2.13
ALDH1A1P00352 AC021146.9-201ENST00000512503 156 ntBASIC1.73□□□□□ -2.13
ALDH1A1P00352 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.73□□□□□ -2.13
ALDH1A1P00352 uc_338.10-201ENST00000621872 182 ntBASIC1.73□□□□□ -2.13
ALDH1A1P00352 SNORA33.1-201ENST00000364957 130 ntBASIC1.72□□□□□ -2.13
ALDH1A1P00352 RNU6-716P-201ENST00000365621 103 ntBASIC1.72□□□□□ -2.13
ALDH1A1P00352 RNA5SP484-201ENST00000458857 111 ntBASIC1.72□□□□□ -2.13
ALDH1A1P00352 MIR4285-201ENST00000581001 85 ntBASIC1.72□□□□□ -2.13
ALDH1A1P00352 MIR6515-201ENST00000619843 57 ntBASIC1.72□□□□□ -2.13
ALDH1A1P00352 Y_RNA.125-201ENST00000363371 111 ntBASIC1.71□□□□□ -2.14
ALDH1A1P00352 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
ALDH1A1P00352 AL354695.1-201ENST00000427935 228 ntBASIC1.7□□□□□ -2.14
ALDH1A1P00352 RNU6-1110P-201ENST00000516462 101 ntBASIC1.7□□□□□ -2.14
ALDH1A1P00352 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
ALDH1A1P00352 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
ALDH1A1P00352 RNU6-753P-201ENST00000363926 107 ntBASIC1.69□□□□□ -2.14
ALDH1A1P00352 SNORA41B-201ENST00000384785 128 ntBASIC1.69□□□□□ -2.14
ALDH1A1P00352 MIR758-201ENST00000390227 88 ntBASIC1.69□□□□□ -2.14
ALDH1A1P00352 MIR3122-201ENST00000577243 73 ntBASIC1.69□□□□□ -2.14
ALDH1A1P00352 MIR6779-201ENST00000617283 64 ntBASIC1.69□□□□□ -2.14
ALDH1A1P00352 SNORD105-201ENST00000386910 85 ntBASIC1.68□□□□□ -2.14
ALDH1A1P00352 SCARNA17.3-201ENST00000516381 125 ntBASIC1.68□□□□□ -2.14
ALDH1A1P00352 RNU6-980P-201ENST00000516925 103 ntBASIC1.68□□□□□ -2.14
ALDH1A1P00352 MIR3678-201ENST00000578455 94 ntBASIC1.68□□□□□ -2.14
ALDH1A1P00352 AL162376.1-201ENST00000624117 175 ntBASIC1.68□□□□□ -2.14
ALDH1A1P00352 SNORA63.6-201ENST00000364921 119 ntBASIC1.67□□□□□ -2.14
ALDH1A1P00352 SNORD48-201ENST00000364953 64 ntBASIC1.67□□□□□ -2.14
ALDH1A1P00352 SNORD89-201ENST00000390981 114 ntBASIC1.67□□□□□ -2.14
ALDH1A1P00352 SCARNA16.5-201ENST00000517114 183 ntBASIC1.67□□□□□ -2.14
ALDH1A1P00352 MIR96-201ENST00000362288 78 ntBASIC1.66□□□□□ -2.14
ALDH1A1P00352 RNU1-93P-201ENST00000364704 169 ntBASIC1.66□□□□□ -2.14
ALDH1A1P00352 Y_RNA.325-201ENST00000365171 122 ntBASIC1.66□□□□□ -2.14
ALDH1A1P00352 MIR652-201ENST00000385278 98 ntBASIC1.66□□□□□ -2.14
ALDH1A1P00352 U7.7-201ENST00000459276 60 ntBASIC1.66□□□□□ -2.14
ALDH1A1P00352 RNU7-119P-201ENST00000459279 63 ntBASIC1.66□□□□□ -2.14
ALDH1A1P00352 MIR582-201ENST00000365731 98 ntBASIC1.65□□□□□ -2.15
ALDH1A1P00352 MIR1304-201ENST00000408243 91 ntBASIC1.65□□□□□ -2.15
ALDH1A1P00352 RNU6-1223P-201ENST00000517124 104 ntBASIC1.65□□□□□ -2.15
ALDH1A1P00352 RNA5SP325-201ENST00000363756 130 ntBASIC1.64□□□□□ -2.15
ALDH1A1P00352 Y_RNA.246-201ENST00000364495 108 ntBASIC1.64□□□□□ -2.15
ALDH1A1P00352 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.64□□□□□ -2.15
ALDH1A1P00352 PVT1_3.1-201ENST00000620853 95 ntBASIC1.64□□□□□ -2.15
ALDH1A1P00352 MIR6828-201ENST00000636181 60 ntBASIC1.64□□□□□ -2.15
ALDH1A1P00352 Y_RNA.407-201ENST00000383986 113 ntBASIC1.63□□□□□ -2.15
ALDH1A1P00352 MIR222-201ENST00000384992 110 ntBASIC1.63□□□□□ -2.15
ALDH1A1P00352 MIR598-201ENST00000384868 97 ntBASIC1.62□□□□□ -2.15
ALDH1A1P00352 MIR573-201ENST00000384964 99 ntBASIC1.62□□□□□ -2.15
ALDH1A1P00352 MIR548E-201ENST00000408287 88 ntBASIC1.62□□□□□ -2.15
ALDH1A1P00352 RNU6-231P-201ENST00000517122 103 ntBASIC1.62□□□□□ -2.15
ALDH1A1P00352 MIR3612-201ENST00000579753 87 ntBASIC1.62□□□□□ -2.15
ALDH1A1P00352 MIR548AE1-201ENST00000583292 70 ntBASIC1.62□□□□□ -2.15
ALDH1A1P00352 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
ALDH1A1P00352 RNA5SP363-201ENST00000365072 115 ntBASIC1.61□□□□□ -2.15
ALDH1A1P00352 SNORA25-201ENST00000384384 134 ntBASIC1.61□□□□□ -2.15
ALDH1A1P00352 RNU6-1246P-201ENST00000391064 107 ntBASIC1.61□□□□□ -2.15
ALDH1A1P00352 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
ALDH1A1P00352 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.6□□□□□ -2.15
ALDH1A1P00352 FABP5P4-201ENST00000437203 171 ntBASIC1.6□□□□□ -2.15
ALDH1A1P00352 MIR151B-201ENST00000584249 96 ntBASIC1.6□□□□□ -2.15
ALDH1A1P00352 DLEU2_4.2-201ENST00000616613 58 ntBASIC1.6□□□□□ -2.15
ALDH1A1P00352 MIR520E-201ENST00000384867 87 ntBASIC1.59□□□□□ -2.15
ALDH1A1P00352 MIR6788-201ENST00000618842 66 ntBASIC1.59□□□□□ -2.15
ALDH1A1P00352 SNORA9.1-201ENST00000362412 131 ntBASIC1.58□□□□□ -2.16
ALDH1A1P00352 RNU6-35P-201ENST00000384530 107 ntBASIC1.58□□□□□ -2.16
ALDH1A1P00352 CYP3A54P-201ENST00000566950 75 ntBASIC1.58□□□□□ -2.16
ALDH1A1P00352 MIR3660-201ENST00000584845 100 ntBASIC1.58□□□□□ -2.16
ALDH1A1P00352 SNORA25.8-201ENST00000364831 128 ntBASIC1.57□□□□□ -2.16
ALDH1A1P00352 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
ALDH1A1P00352 RPS29P1-201ENST00000465274 159 ntBASIC1.57□□□□□ -2.16
ALDH1A1P00352 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.57□□□□□ -2.16
ALDH1A1P00352 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC1.57□□□□□ -2.16
ALDH1A1P00352 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
ALDH1A1P00352 RNA5SP327-201ENST00000362494 101 ntBASIC1.56□□□□□ -2.16
ALDH1A1P00352 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.56□□□□□ -2.16
ALDH1A1P00352 SNORD116-16-201ENST00000384533 92 ntBASIC1.55□□□□□ -2.16
ALDH1A1P00352 RNU6-997P-201ENST00000384725 107 ntBASIC1.55□□□□□ -2.16
ALDH1A1P00352 MIR19B1-201ENST00000384829 87 ntBASIC1.55□□□□□ -2.16
ALDH1A1P00352 SNORA40.16-201ENST00000517238 121 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 188 ms