Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 MIR573-201ENST00000384964 99 ntBASIC1.13□□□□□ -2.23
TRIM13O60858 SNORA17.3-201ENST00000391159 129 ntBASIC1.13□□□□□ -2.23
TRIM13O60858 Y_RNA.633-201ENST00000459107 95 ntBASIC1.13□□□□□ -2.23
TRIM13O60858 AC021146.9-201ENST00000512503 156 ntBASIC1.13□□□□□ -2.23
TRIM13O60858 RNU7-174P-201ENST00000516248 59 ntBASIC1.13□□□□□ -2.23
TRIM13O60858 RNA5SP404-201ENST00000517118 132 ntBASIC1.13□□□□□ -2.23
TRIM13O60858 AL353997.5-201ENST00000618886 171 ntBASIC1.13□□□□□ -2.23
TRIM13O60858 U2.7-201ENST00000619197 100 ntBASIC1.13□□□□□ -2.23
TRIM13O60858 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.13□□□□□ -2.23
TRIM13O60858 AL162376.1-201ENST00000624117 175 ntBASIC1.13□□□□□ -2.23
TRIM13O60858 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
TRIM13O60858 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
TRIM13O60858 RNU6-698P-201ENST00000363523 107 ntBASIC1.12□□□□□ -2.23
TRIM13O60858 RNU6-34P-201ENST00000364874 107 ntBASIC1.12□□□□□ -2.23
TRIM13O60858 MIR618-201ENST00000385287 98 ntBASIC1.12□□□□□ -2.23
TRIM13O60858 SNORD113-2-201ENST00000391082 72 ntBASIC1.12□□□□□ -2.23
TRIM13O60858 MIR3612-201ENST00000579753 87 ntBASIC1.12□□□□□ -2.23
TRIM13O60858 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC1.12□□□□□ -2.23
TRIM13O60858 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.12□□□□□ -2.23
TRIM13O60858 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.12□□□□□ -2.23
TRIM13O60858 MIR517B-201ENST00000385102 67 ntBASIC1.11□□□□□ -2.23
TRIM13O60858 U4.4-201ENST00000620626 117 ntBASIC1.11□□□□□ -2.23
TRIM13O60858 MIR6828-201ENST00000636181 60 ntBASIC1.11□□□□□ -2.23
TRIM13O60858 SNORD114-24-201ENST00000365029 72 ntBASIC1.1□□□□□ -2.23
TRIM13O60858 SNORA15B-2-201ENST00000384058 135 ntBASIC1.1□□□□□ -2.23
TRIM13O60858 SNORA15B-1-201ENST00000384334 135 ntBASIC1.1□□□□□ -2.23
TRIM13O60858 OR2A41P-201ENST00000473586 105 ntBASIC1.1□□□□□ -2.23
TRIM13O60858 SCARNA17.3-201ENST00000516381 125 ntBASIC1.1□□□□□ -2.23
TRIM13O60858 MIR4524B-201ENST00000581569 115 ntBASIC1.1□□□□□ -2.23
TRIM13O60858 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
TRIM13O60858 SNORA33.1-201ENST00000364957 130 ntBASIC1.09□□□□□ -2.23
TRIM13O60858 RNU4-62P-201ENST00000410125 130 ntBASIC1.09□□□□□ -2.23
TRIM13O60858 SNORD124-201ENST00000459577 104 ntBASIC1.09□□□□□ -2.23
TRIM13O60858 uc_338.10-201ENST00000621872 182 ntBASIC1.09□□□□□ -2.23
TRIM13O60858 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.09□□□□□ -2.24
TRIM13O60858 Y_RNA.125-201ENST00000363371 111 ntBASIC1.08□□□□□ -2.24
TRIM13O60858 SNORA63.6-201ENST00000364921 119 ntBASIC1.08□□□□□ -2.24
TRIM13O60858 Y_RNA.407-201ENST00000383986 113 ntBASIC1.08□□□□□ -2.24
TRIM13O60858 RNU6-482P-201ENST00000391068 107 ntBASIC1.08□□□□□ -2.24
TRIM13O60858 AC108667.1-201ENST00000428618 249 ntBASIC1.08□□□□□ -2.24
TRIM13O60858 RNA5SP99-201ENST00000364020 114 ntBASIC1.07□□□□□ -2.24
TRIM13O60858 MIR582-201ENST00000365731 98 ntBASIC1.07□□□□□ -2.24
TRIM13O60858 MIR652-201ENST00000385278 98 ntBASIC1.07□□□□□ -2.24
TRIM13O60858 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.07□□□□□ -2.24
TRIM13O60858 RNU6-1312P-201ENST00000362425 108 ntBASIC1.06□□□□□ -2.24
TRIM13O60858 RNU6-520P-201ENST00000384717 104 ntBASIC1.06□□□□□ -2.24
TRIM13O60858 RNU7-95P-201ENST00000459222 64 ntBASIC1.06□□□□□ -2.24
TRIM13O60858 MIR548AE1-201ENST00000583292 70 ntBASIC1.06□□□□□ -2.24
TRIM13O60858 AL353770.2-201ENST00000620024 78 ntBASIC1.06□□□□□ -2.24
TRIM13O60858 MIR548E-201ENST00000408287 88 ntBASIC1.05□□□□□ -2.24
TRIM13O60858 RNA5SP227-201ENST00000516184 113 ntBASIC1.05□□□□□ -2.24
TRIM13O60858 AC025627.3-201ENST00000582078 182 ntBASIC1.05□□□□□ -2.24
TRIM13O60858 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC1.05□□□□□ -2.24
TRIM13O60858 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.05□□□□□ -2.24
TRIM13O60858 SNORA36.1-201ENST00000363424 132 ntBASIC1.04□□□□□ -2.24
TRIM13O60858 AC103810.9-201ENST00000606688 112 ntBASIC1.04□□□□□ -2.24
TRIM13O60858 AP1B1P2-201ENST00000416196 106 ntBASIC1.03□□□□□ -2.24
TRIM13O60858 AC006210.1-201ENST00000424882 111 ntBASIC1.03□□□□□ -2.24
TRIM13O60858 RNU6-237P-201ENST00000515985 71 ntBASIC1.03□□□□□ -2.24
TRIM13O60858 RNA5SP255-201ENST00000516370 107 ntBASIC1.03□□□□□ -2.24
TRIM13O60858 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.03□□□□□ -2.24
TRIM13O60858 MIR4473-201ENST00000583731 91 ntBASIC1.03□□□□□ -2.24
TRIM13O60858 SNORD114-21-201ENST00000606412 72 ntBASIC1.03□□□□□ -2.24
TRIM13O60858 MIR18A-201ENST00000362310 71 ntBASIC1.02□□□□□ -2.25
TRIM13O60858 Y_RNA.246-201ENST00000364495 108 ntBASIC1.02□□□□□ -2.25
TRIM13O60858 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
TRIM13O60858 SNORA41B-201ENST00000384785 128 ntBASIC1.02□□□□□ -2.25
TRIM13O60858 SNORD110-201ENST00000408189 75 ntBASIC1.02□□□□□ -2.25
TRIM13O60858 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.01□□□□□ -2.25
TRIM13O60858 Y_RNA.325-201ENST00000365171 122 ntBASIC1.01□□□□□ -2.25
TRIM13O60858 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
TRIM13O60858 RNA5SP268-201ENST00000516828 124 ntBASIC1.01□□□□□ -2.25
TRIM13O60858 MIR378A-201ENST00000362177 66 ntBASIC1□□□□□ -2.25
TRIM13O60858 Y_RNA.379-201ENST00000365653 102 ntBASIC1□□□□□ -2.25
TRIM13O60858 RNU6-1246P-201ENST00000391064 107 ntBASIC1□□□□□ -2.25
TRIM13O60858 MIR4769-201ENST00000584126 77 ntBASIC1□□□□□ -2.25
TRIM13O60858 MIR548AD-201ENST00000584780 82 ntBASIC1□□□□□ -2.25
TRIM13O60858 MIR4295-201ENST00000585286 85 ntBASIC1□□□□□ -2.25
TRIM13O60858 MIR7107-201ENST00000611489 80 ntBASIC1□□□□□ -2.25
TRIM13O60858 RNU4-45P-201ENST00000365469 141 ntBASIC0.99□□□□□ -2.25
TRIM13O60858 RNU4-88P-201ENST00000411220 86 ntBASIC0.99□□□□□ -2.25
TRIM13O60858 RNU7-119P-201ENST00000459279 63 ntBASIC0.99□□□□□ -2.25
TRIM13O60858 RNA5SP94-201ENST00000516917 108 ntBASIC0.99□□□□□ -2.25
TRIM13O60858 MIR4661-201ENST00000582720 75 ntBASIC0.99□□□□□ -2.25
TRIM13O60858 SNORA9.1-201ENST00000362412 131 ntBASIC0.98□□□□□ -2.25
TRIM13O60858 SNORD99-201ENST00000408612 74 ntBASIC0.98□□□□□ -2.25
TRIM13O60858 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.98□□□□□ -2.25
TRIM13O60858 RNA5SP458-201ENST00000516188 119 ntBASIC0.98□□□□□ -2.25
TRIM13O60858 CYP3A54P-201ENST00000566950 75 ntBASIC0.98□□□□□ -2.25
TRIM13O60858 AC011195.1-201ENST00000578177 177 ntBASIC0.98□□□□□ -2.25
TRIM13O60858 MIR6078-201ENST00000611069 100 ntBASIC0.98□□□□□ -2.25
TRIM13O60858 SNORA70.25-201ENST00000612741 95 ntBASIC0.98□□□□□ -2.25
TRIM13O60858 RNU4-38P-201ENST00000364472 129 ntBASIC0.97□□□□□ -2.25
TRIM13O60858 MIR516B1-201ENST00000385211 90 ntBASIC0.97□□□□□ -2.25
TRIM13O60858 AL021921.1-201ENST00000442774 93 ntBASIC0.97□□□□□ -2.25
TRIM13O60858 RNU6-231P-201ENST00000517122 103 ntBASIC0.97□□□□□ -2.25
TRIM13O60858 U6.96-201ENST00000636425 70 ntBASIC0.97□□□□□ -2.25
TRIM13O60858 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
TRIM13O60858 AC087343.1-201ENST00000477341 475 ntBASIC0.96□□□□□ -2.26
TRIM13O60858 MIR3124-201ENST00000582636 67 ntBASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 281.3 ms