Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
PRICKLE3O43900 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.2□□□□□ -2.22
PRICKLE3O43900 RNU6-829P-201ENST00000363700 112 ntBASIC1.19□□□□□ -2.22
PRICKLE3O43900 SNORA25.5-201ENST00000363782 126 ntBASIC1.19□□□□□ -2.22
PRICKLE3O43900 RNA5SP117-201ENST00000365294 118 ntBASIC1.19□□□□□ -2.22
PRICKLE3O43900 MIR548J-201ENST00000408833 112 ntBASIC1.19□□□□□ -2.22
PRICKLE3O43900 AC244669.1-204ENST00000621564 178 ntBASIC1.19□□□□□ -2.22
PRICKLE3O43900 MIR6739-201ENST00000622461 75 ntBASIC1.19□□□□□ -2.22
PRICKLE3O43900 RNA5SP215-201ENST00000363440 122 ntBASIC1.18□□□□□ -2.22
PRICKLE3O43900 MIR222-201ENST00000384992 110 ntBASIC1.18□□□□□ -2.22
PRICKLE3O43900 SCARNA21.1-201ENST00000515996 128 ntBASIC1.18□□□□□ -2.22
PRICKLE3O43900 RNU6-1110P-201ENST00000516462 101 ntBASIC1.18□□□□□ -2.22
PRICKLE3O43900 RNU6-656P-201ENST00000516785 107 ntBASIC1.18□□□□□ -2.22
PRICKLE3O43900 RNA5SP404-201ENST00000517118 132 ntBASIC1.18□□□□□ -2.22
PRICKLE3O43900 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
PRICKLE3O43900 RNU6-726P-201ENST00000364680 107 ntBASIC1.17□□□□□ -2.22
PRICKLE3O43900 RNU6-940P-201ENST00000363433 104 ntBASIC1.16□□□□□ -2.22
PRICKLE3O43900 RNU1-124P-201ENST00000363861 145 ntBASIC1.16□□□□□ -2.22
PRICKLE3O43900 RNA5SP192-201ENST00000364404 120 ntBASIC1.16□□□□□ -2.22
PRICKLE3O43900 Y_RNA.236-201ENST00000364427 111 ntBASIC1.16□□□□□ -2.22
PRICKLE3O43900 RNU6-939P-201ENST00000384634 107 ntBASIC1.16□□□□□ -2.22
PRICKLE3O43900 RNA5SP47-201ENST00000517230 109 ntBASIC1.16□□□□□ -2.22
PRICKLE3O43900 MIR466-201ENST00000580653 84 ntBASIC1.16□□□□□ -2.22
PRICKLE3O43900 RNU6-990P-201ENST00000364385 104 ntBASIC1.15□□□□□ -2.23
PRICKLE3O43900 RNU1-141P-201ENST00000364623 158 ntBASIC1.15□□□□□ -2.23
PRICKLE3O43900 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
PRICKLE3O43900 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.15□□□□□ -2.23
PRICKLE3O43900 MIR4460-201ENST00000577862 86 ntBASIC1.15□□□□□ -2.23
PRICKLE3O43900 RNU6-1079P-201ENST00000362861 110 ntBASIC1.14□□□□□ -2.23
PRICKLE3O43900 SNORD18A-201ENST00000363753 72 ntBASIC1.14□□□□□ -2.23
PRICKLE3O43900 Y_RNA.250-201ENST00000364542 110 ntBASIC1.14□□□□□ -2.23
PRICKLE3O43900 MIR19B1-201ENST00000384829 87 ntBASIC1.14□□□□□ -2.23
PRICKLE3O43900 MIR150-201ENST00000385048 84 ntBASIC1.14□□□□□ -2.23
PRICKLE3O43900 SNORD105-201ENST00000386910 85 ntBASIC1.14□□□□□ -2.23
PRICKLE3O43900 RNA5SP299-201ENST00000391203 116 ntBASIC1.14□□□□□ -2.23
PRICKLE3O43900 U7.7-201ENST00000459276 60 ntBASIC1.14□□□□□ -2.23
PRICKLE3O43900 RNA5SP436-201ENST00000516020 115 ntBASIC1.14□□□□□ -2.23
PRICKLE3O43900 RNU6-469P-201ENST00000516253 101 ntBASIC1.14□□□□□ -2.23
PRICKLE3O43900 SNORA8.2-201ENST00000384372 139 ntBASIC1.13□□□□□ -2.23
PRICKLE3O43900 RNU6-1089P-201ENST00000516473 104 ntBASIC1.13□□□□□ -2.23
PRICKLE3O43900 MIR6767-201ENST00000637302 66 ntBASIC1.13□□□□□ -2.23
PRICKLE3O43900 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.12□□□□□ -2.23
PRICKLE3O43900 SNORD114-4-201ENST00000363962 75 ntBASIC1.12□□□□□ -2.23
PRICKLE3O43900 RNU6-1335P-201ENST00000365426 107 ntBASIC1.12□□□□□ -2.23
PRICKLE3O43900 SNORD89-201ENST00000390981 114 ntBASIC1.12□□□□□ -2.23
PRICKLE3O43900 FABP5P4-201ENST00000437203 171 ntBASIC1.12□□□□□ -2.23
PRICKLE3O43900 RNA5SP147-201ENST00000516493 109 ntBASIC1.12□□□□□ -2.23
PRICKLE3O43900 AC018659.1-201ENST00000551083 169 ntBASIC1.12□□□□□ -2.23
PRICKLE3O43900 RNU6-446P-201ENST00000362827 106 ntBASIC1.11□□□□□ -2.23
PRICKLE3O43900 RNU6-269P-201ENST00000391077 97 ntBASIC1.11□□□□□ -2.23
PRICKLE3O43900 MIR548L-201ENST00000408303 86 ntBASIC1.11□□□□□ -2.23
PRICKLE3O43900 RNU6-122P-201ENST00000516818 107 ntBASIC1.11□□□□□ -2.23
PRICKLE3O43900 MIR521-2-201ENST00000384818 87 ntBASIC1.1□□□□□ -2.23
PRICKLE3O43900 SCARNA16.5-201ENST00000517114 183 ntBASIC1.1□□□□□ -2.23
PRICKLE3O43900 MIR3678-201ENST00000578455 94 ntBASIC1.1□□□□□ -2.23
PRICKLE3O43900 RNU6-92P-201ENST00000605893 104 ntBASIC1.1□□□□□ -2.23
PRICKLE3O43900 MIR6828-201ENST00000636181 60 ntBASIC1.1□□□□□ -2.23
PRICKLE3O43900 RNU6-302P-201ENST00000365249 107 ntBASIC1.09□□□□□ -2.23
PRICKLE3O43900 RNU6-1162P-201ENST00000384443 104 ntBASIC1.09□□□□□ -2.23
PRICKLE3O43900 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.09□□□□□ -2.23
PRICKLE3O43900 RN7SL793P-201ENST00000583259 296 ntBASIC1.09□□□□□ -2.23
PRICKLE3O43900 AL162376.1-201ENST00000624117 175 ntBASIC1.09□□□□□ -2.23
PRICKLE3O43900 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
PRICKLE3O43900 Y_RNA.30-201ENST00000362572 97 ntBASIC1.08□□□□□ -2.24
PRICKLE3O43900 RNU6-716P-201ENST00000365621 103 ntBASIC1.08□□□□□ -2.24
PRICKLE3O43900 MIR573-201ENST00000384964 99 ntBASIC1.08□□□□□ -2.24
PRICKLE3O43900 RNU5B-6P-201ENST00000516765 68 ntBASIC1.08□□□□□ -2.24
PRICKLE3O43900 MIR3612-201ENST00000579753 87 ntBASIC1.08□□□□□ -2.24
PRICKLE3O43900 MIR3938-201ENST00000582157 103 ntBASIC1.08□□□□□ -2.24
PRICKLE3O43900 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
PRICKLE3O43900 AL157398.1-201ENST00000452981 186 ntBASIC1.07□□□□□ -2.24
PRICKLE3O43900 Y_RNA.633-201ENST00000459107 95 ntBASIC1.07□□□□□ -2.24
PRICKLE3O43900 OR2A41P-201ENST00000473586 105 ntBASIC1.07□□□□□ -2.24
PRICKLE3O43900 MIR200A-201ENST00000384875 90 ntBASIC1.06□□□□□ -2.24
PRICKLE3O43900 RNA5SP484-201ENST00000458857 111 ntBASIC1.06□□□□□ -2.24
PRICKLE3O43900 MIR4295-201ENST00000585286 85 ntBASIC1.06□□□□□ -2.24
PRICKLE3O43900 SNORD60.1-201ENST00000362451 73 ntBASIC1.05□□□□□ -2.24
PRICKLE3O43900 SNORD124-201ENST00000459577 104 ntBASIC1.05□□□□□ -2.24
PRICKLE3O43900 AC087343.1-201ENST00000477341 475 ntBASIC1.05□□□□□ -2.24
PRICKLE3O43900 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.05□□□□□ -2.24
PRICKLE3O43900 SNORA15B-2-201ENST00000384058 135 ntBASIC1.04□□□□□ -2.24
PRICKLE3O43900 SNORA15B-1-201ENST00000384334 135 ntBASIC1.04□□□□□ -2.24
PRICKLE3O43900 MIR216A-201ENST00000385063 110 ntBASIC1.04□□□□□ -2.24
PRICKLE3O43900 SNORA75.1-201ENST00000391130 148 ntBASIC1.04□□□□□ -2.24
PRICKLE3O43900 AC025627.3-201ENST00000582078 182 ntBASIC1.04□□□□□ -2.24
PRICKLE3O43900 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC1.04□□□□□ -2.24
PRICKLE3O43900 Y_RNA.178-201ENST00000363832 102 ntBASIC1.03□□□□□ -2.24
PRICKLE3O43900 SNORD114-24-201ENST00000365029 72 ntBASIC1.03□□□□□ -2.24
PRICKLE3O43900 MIR1285-1-201ENST00000408593 84 ntBASIC1.03□□□□□ -2.24
PRICKLE3O43900 snoU13.13-201ENST00000458842 104 ntBASIC1.03□□□□□ -2.24
PRICKLE3O43900 RNU7-174P-201ENST00000516248 59 ntBASIC1.03□□□□□ -2.24
PRICKLE3O43900 SCARNA17.3-201ENST00000516381 125 ntBASIC1.03□□□□□ -2.24
PRICKLE3O43900 MIR5000-201ENST00000577717 103 ntBASIC1.03□□□□□ -2.24
PRICKLE3O43900 U2.7-201ENST00000619197 100 ntBASIC1.03□□□□□ -2.24
PRICKLE3O43900 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.03□□□□□ -2.24
PRICKLE3O43900 RNU6-698P-201ENST00000363523 107 ntBASIC1.02□□□□□ -2.25
PRICKLE3O43900 SNORD113-4-201ENST00000364802 75 ntBASIC1.02□□□□□ -2.25
PRICKLE3O43900 RNU6-34P-201ENST00000364874 107 ntBASIC1.02□□□□□ -2.25
PRICKLE3O43900 MIR630-201ENST00000384957 97 ntBASIC1.02□□□□□ -2.25
PRICKLE3O43900 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 1022.7 ms