Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 snoU13.17-201ENST00000458802 104 ntBASIC-1.75□□□□□ -2.69
SGCEO43556 MIR6844-201ENST00000637122 62 ntBASIC-1.75□□□□□ -2.69
SGCEO43556 Y_RNA.198-201ENST00000364013 98 ntBASIC-1.76□□□□□ -2.69
SGCEO43556 Y_RNA.213-201ENST00000364178 111 ntBASIC-1.76□□□□□ -2.69
SGCEO43556 RNU6-409P-201ENST00000384114 104 ntBASIC-1.76□□□□□ -2.69
SGCEO43556 CYP3A54P-201ENST00000566950 75 ntBASIC-1.76□□□□□ -2.69
SGCEO43556 MIR4795-201ENST00000584182 89 ntBASIC-1.76□□□□□ -2.69
SGCEO43556 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.76□□□□□ -2.69
SGCEO43556 Y_RNA.228-201ENST00000364346 98 ntBASIC-1.77□□□□□ -2.69
SGCEO43556 Y_RNA.337-201ENST00000365312 102 ntBASIC-1.77□□□□□ -2.69
SGCEO43556 RNU6-1014P-201ENST00000383940 103 ntBASIC-1.77□□□□□ -2.69
SGCEO43556 RNU6-260P-201ENST00000384092 107 ntBASIC-1.77□□□□□ -2.69
SGCEO43556 Y_RNA.528-201ENST00000384575 108 ntBASIC-1.77□□□□□ -2.69
SGCEO43556 RBMX2P4-201ENST00000441256 376 ntBASIC-1.77□□□□□ -2.69
SGCEO43556 RNU6-1333P-201ENST00000516162 93 ntBASIC-1.77□□□□□ -2.69
SGCEO43556 RNU7-154P-201ENST00000516194 62 ntBASIC-1.77□□□□□ -2.69
SGCEO43556 U6.104-201ENST00000637979 90 ntBASIC-1.77□□□□□ -2.69
SGCEO43556 RNY4P28-201ENST00000365281 93 ntBASIC-1.78□□□□□ -2.69
SGCEO43556 MT-TW-201ENST00000387382 68 ntBASIC-1.78□□□□□ -2.69
SGCEO43556 SNORD19-201ENST00000391191 68 ntBASIC-1.78□□□□□ -2.69
SGCEO43556 RNU6-1271P-201ENST00000517049 105 ntBASIC-1.78□□□□□ -2.69
SGCEO43556 MIR3064-201ENST00000581130 66 ntBASIC-1.78□□□□□ -2.69
SGCEO43556 MIR548AM-201ENST00000584298 74 ntBASIC-1.78□□□□□ -2.69
SGCEO43556 Y_RNA.153-201ENST00000363615 91 ntBASIC-1.79□□□□□ -2.7
SGCEO43556 Y_RNA.155-201ENST00000363632 101 ntBASIC-1.79□□□□□ -2.7
SGCEO43556 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.79□□□□□ -2.7
SGCEO43556 RNU6-713P-201ENST00000384761 107 ntBASIC-1.79□□□□□ -2.7
SGCEO43556 MIR548U-201ENST00000390728 81 ntBASIC-1.79□□□□□ -2.7
SGCEO43556 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.79□□□□□ -2.7
SGCEO43556 AC018880.2-201ENST00000414265 201 ntBASIC-1.79□□□□□ -2.7
SGCEO43556 SNORD54-201ENST00000459159 67 ntBASIC-1.79□□□□□ -2.7
SGCEO43556 Y_RNA.352-201ENST00000365439 102 ntBASIC-1.8□□□□□ -2.7
SGCEO43556 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.8□□□□□ -2.7
SGCEO43556 Y_RNA.421-201ENST00000384052 101 ntBASIC-1.8□□□□□ -2.7
SGCEO43556 Y_RNA.558-201ENST00000384685 113 ntBASIC-1.8□□□□□ -2.7
SGCEO43556 RNU6-695P-201ENST00000391157 104 ntBASIC-1.8□□□□□ -2.7
SGCEO43556 RNU5E-3P-201ENST00000515913 68 ntBASIC-1.8□□□□□ -2.7
SGCEO43556 MIR3123-201ENST00000583417 75 ntBASIC-1.8□□□□□ -2.7
SGCEO43556 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.8□□□□□ -2.7
SGCEO43556 RNU6-774P-201ENST00000363238 107 ntBASIC-1.81□□□□□ -2.7
SGCEO43556 RNU6-382P-201ENST00000365181 106 ntBASIC-1.81□□□□□ -2.7
SGCEO43556 Y_RNA.400-201ENST00000383963 111 ntBASIC-1.81□□□□□ -2.7
SGCEO43556 Y_RNA.507-201ENST00000384500 99 ntBASIC-1.81□□□□□ -2.7
SGCEO43556 RNA5SP147-201ENST00000516493 109 ntBASIC-1.81□□□□□ -2.7
SGCEO43556 AC104996.3-201ENST00000590718 94 ntBASIC-1.81□□□□□ -2.7
SGCEO43556 AC006254.2-201ENST00000603259 279 ntBASIC-1.81□□□□□ -2.7
SGCEO43556 Y_RNA.257-201ENST00000364596 102 ntBASIC-1.82□□□□□ -2.7
SGCEO43556 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.82□□□□□ -2.7
SGCEO43556 AL513043.2-201ENST00000573941 143 ntBASIC-1.82□□□□□ -2.7
SGCEO43556 MIR5683-201ENST00000636514 76 ntBASIC-1.82□□□□□ -2.7
SGCEO43556 Y_RNA.163-201ENST00000363702 113 ntBASIC-1.83□□□□□ -2.7
SGCEO43556 RNU4-40P-201ENST00000364351 143 ntBASIC-1.83□□□□□ -2.7
SGCEO43556 Y_RNA.277-201ENST00000364754 102 ntBASIC-1.83□□□□□ -2.7
SGCEO43556 Y_RNA.344-201ENST00000365381 112 ntBASIC-1.83□□□□□ -2.7
SGCEO43556 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.83□□□□□ -2.7
SGCEO43556 RNU6-474P-201ENST00000384243 107 ntBASIC-1.83□□□□□ -2.7
SGCEO43556 MIR4680-201ENST00000580906 66 ntBASIC-1.83□□□□□ -2.7
SGCEO43556 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.84□□□□□ -2.7
SGCEO43556 RNU6-841P-201ENST00000383872 107 ntBASIC-1.84□□□□□ -2.7
SGCEO43556 Y_RNA.403-201ENST00000383977 101 ntBASIC-1.84□□□□□ -2.7
SGCEO43556 MIR519A2-201ENST00000384990 87 ntBASIC-1.84□□□□□ -2.7
SGCEO43556 MT-TD-201ENST00000387419 68 ntBASIC-1.84□□□□□ -2.7
SGCEO43556 MIR548P-201ENST00000408336 84 ntBASIC-1.84□□□□□ -2.7
SGCEO43556 RNA5SP136-201ENST00000410906 107 ntBASIC-1.84□□□□□ -2.7
SGCEO43556 RNU6-62P-201ENST00000516526 102 ntBASIC-1.84□□□□□ -2.7
SGCEO43556 MIR3121-201ENST00000579680 77 ntBASIC-1.84□□□□□ -2.7
SGCEO43556 MIR4490-201ENST00000582647 84 ntBASIC-1.84□□□□□ -2.7
SGCEO43556 MIR3657-201ENST00000584818 117 ntBASIC-1.84□□□□□ -2.7
SGCEO43556 Y_RNA.525-201ENST00000384570 113 ntBASIC-1.85□□□□□ -2.71
SGCEO43556 Y_RNA.619-201ENST00000410951 90 ntBASIC-1.85□□□□□ -2.71
SGCEO43556 MIR6509-201ENST00000614603 85 ntBASIC-1.85□□□□□ -2.71
SGCEO43556 Y_RNA.188-201ENST00000363952 111 ntBASIC-1.86□□□□□ -2.71
SGCEO43556 Y_RNA.419-201ENST00000384041 102 ntBASIC-1.86□□□□□ -2.71
SGCEO43556 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.86□□□□□ -2.71
SGCEO43556 MIR203A-201ENST00000384836 110 ntBASIC-1.86□□□□□ -2.71
SGCEO43556 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-1.86□□□□□ -2.71
SGCEO43556 MIR1302-6-201ENST00000408466 90 ntBASIC-1.86□□□□□ -2.71
SGCEO43556 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.86□□□□□ -2.71
SGCEO43556 SNORD127-201ENST00000458892 86 ntBASIC-1.86□□□□□ -2.71
SGCEO43556 Y_RNA.435-201ENST00000384095 112 ntBASIC-1.87□□□□□ -2.71
SGCEO43556 Y_RNA.483-201ENST00000384380 101 ntBASIC-1.87□□□□□ -2.71
SGCEO43556 MIR521-2-201ENST00000384818 87 ntBASIC-1.87□□□□□ -2.71
SGCEO43556 SNORD90-201ENST00000391145 111 ntBASIC-1.87□□□□□ -2.71
SGCEO43556 Y_RNA.626-201ENST00000411288 95 ntBASIC-1.87□□□□□ -2.71
SGCEO43556 MIR3658-201ENST00000636291 56 ntBASIC-1.87□□□□□ -2.71
SGCEO43556 RNU6-816P-201ENST00000390914 107 ntBASIC-1.88□□□□□ -2.71
SGCEO43556 RNU6-1268P-201ENST00000391214 107 ntBASIC-1.88□□□□□ -2.71
SGCEO43556 RNU6-1239P-201ENST00000391310 107 ntBASIC-1.88□□□□□ -2.71
SGCEO43556 SNORD4B-201ENST00000459083 72 ntBASIC-1.88□□□□□ -2.71
SGCEO43556 RNU7-121P-201ENST00000516604 62 ntBASIC-1.88□□□□□ -2.71
SGCEO43556 AC130289.1-201ENST00000577321 73 ntBASIC-1.88□□□□□ -2.71
SGCEO43556 RNU6-1094P-201ENST00000362416 104 ntBASIC-1.89□□□□□ -2.71
SGCEO43556 RNU6-824P-201ENST00000363724 104 ntBASIC-1.89□□□□□ -2.71
SGCEO43556 RNU6-151P-201ENST00000364158 107 ntBASIC-1.89□□□□□ -2.71
SGCEO43556 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.89□□□□□ -2.71
SGCEO43556 MIR577-201ENST00000385196 96 ntBASIC-1.89□□□□□ -2.71
SGCEO43556 RNA5SP292-201ENST00000390974 118 ntBASIC-1.89□□□□□ -2.71
SGCEO43556 SNORD37.2-201ENST00000391075 66 ntBASIC-1.89□□□□□ -2.71
SGCEO43556 RNU6-918P-201ENST00000391219 106 ntBASIC-1.89□□□□□ -2.71
SGCEO43556 MTND5P20-201ENST00000448677 143 ntBASIC-1.89□□□□□ -2.71
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms