Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 MIR193B-201ENST00000384907 83 ntBASIC0.21□□□□□ -2.38
PHGDHO43175 MIR652-201ENST00000385278 98 ntBASIC0.21□□□□□ -2.38
PHGDHO43175 SNORD115-37-201ENST00000363768 82 ntBASIC0.2□□□□□ -2.38
PHGDHO43175 RNU6-1177P-201ENST00000391058 104 ntBASIC0.2□□□□□ -2.38
PHGDHO43175 RNA5SP480-201ENST00000516840 109 ntBASIC0.2□□□□□ -2.38
PHGDHO43175 SNORD114-26-201ENST00000363543 72 ntBASIC0.19□□□□□ -2.38
PHGDHO43175 AC140658.3-201ENST00000567603 271 ntBASIC0.19□□□□□ -2.38
PHGDHO43175 AC084368.1-201ENST00000620935 65 ntBASIC0.19□□□□□ -2.38
PHGDHO43175 MIR494-201ENST00000349529 81 ntBASIC0.18□□□□□ -2.38
PHGDHO43175 RNA5SP214-201ENST00000363378 118 ntBASIC0.18□□□□□ -2.38
PHGDHO43175 RNU6-652P-201ENST00000365488 107 ntBASIC0.18□□□□□ -2.38
PHGDHO43175 RNU6-154P-201ENST00000384306 106 ntBASIC0.18□□□□□ -2.38
PHGDHO43175 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.18□□□□□ -2.38
PHGDHO43175 MIR548H2-201ENST00000408874 88 ntBASIC0.18□□□□□ -2.38
PHGDHO43175 RNU6-782P-201ENST00000516852 104 ntBASIC0.18□□□□□ -2.38
PHGDHO43175 SCARNA11.2-201ENST00000517183 154 ntBASIC0.18□□□□□ -2.38
PHGDHO43175 AC104408.1-201ENST00000605241 170 ntBASIC0.18□□□□□ -2.38
PHGDHO43175 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.18□□□□□ -2.38
PHGDHO43175 AC006160.2-201ENST00000637708 154 ntBASIC0.18□□□□□ -2.38
PHGDHO43175 MIR924-201ENST00000638017 53 ntBASIC0.18□□□□□ -2.38
PHGDHO43175 RNU6-495P-201ENST00000362995 107 ntBASIC0.17□□□□□ -2.38
PHGDHO43175 RNU6-824P-201ENST00000363724 104 ntBASIC0.17□□□□□ -2.38
PHGDHO43175 RNA5SP325-201ENST00000363756 130 ntBASIC0.17□□□□□ -2.38
PHGDHO43175 Y_RNA.540-201ENST00000384638 111 ntBASIC0.17□□□□□ -2.38
PHGDHO43175 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.17□□□□□ -2.38
PHGDHO43175 RNU6ATAC17P-201ENST00000516074 71 ntBASIC0.17□□□□□ -2.38
PHGDHO43175 MIR1273G-201ENST00000577677 100 ntBASIC0.17□□□□□ -2.38
PHGDHO43175 RNU5F-1-201ENST00000362507 117 ntBASIC0.16□□□□□ -2.38
PHGDHO43175 MIR1295A-201ENST00000408463 79 ntBASIC0.16□□□□□ -2.38
PHGDHO43175 AL450471.1-201ENST00000447509 127 ntBASIC0.16□□□□□ -2.38
PHGDHO43175 RNU6-1108P-201ENST00000516308 104 ntBASIC0.16□□□□□ -2.38
PHGDHO43175 SNORA62.5-201ENST00000516634 120 ntBASIC0.16□□□□□ -2.38
PHGDHO43175 RNU7-188P-201ENST00000517063 64 ntBASIC0.16□□□□□ -2.38
PHGDHO43175 Y_RNA.43-201ENST00000362670 111 ntBASIC0.15□□□□□ -2.39
PHGDHO43175 RNU6-161P-201ENST00000363051 106 ntBASIC0.15□□□□□ -2.39
PHGDHO43175 SNORA42.1-201ENST00000363515 137 ntBASIC0.15□□□□□ -2.39
PHGDHO43175 SNORD114-9-201ENST00000364370 72 ntBASIC0.15□□□□□ -2.39
PHGDHO43175 RNU6-382P-201ENST00000365181 106 ntBASIC0.15□□□□□ -2.39
PHGDHO43175 MIR593-201ENST00000384856 100 ntBASIC0.15□□□□□ -2.39
PHGDHO43175 MIR450A2-201ENST00000385022 100 ntBASIC0.15□□□□□ -2.39
PHGDHO43175 MIR610-201ENST00000385139 96 ntBASIC0.15□□□□□ -2.39
PHGDHO43175 AC097510.1-201ENST00000510945 133 ntBASIC0.15□□□□□ -2.39
PHGDHO43175 MIR5588-201ENST00000581890 63 ntBASIC0.15□□□□□ -2.39
PHGDHO43175 RN7SL660P-201ENST00000614852 299 ntBASIC0.15□□□□□ -2.39
PHGDHO43175 RNU6-624P-201ENST00000363411 107 ntBASIC0.14□□□□□ -2.39
PHGDHO43175 MIR4773-1-201ENST00000637203 78 ntBASIC0.14□□□□□ -2.39
PHGDHO43175 RNU6-208P-201ENST00000362431 107 ntBASIC0.13□□□□□ -2.39
PHGDHO43175 SNORD73B-201ENST00000364394 72 ntBASIC0.13□□□□□ -2.39
PHGDHO43175 RNU6-979P-201ENST00000383896 107 ntBASIC0.13□□□□□ -2.39
PHGDHO43175 AC022137.1-201ENST00000483735 151 ntBASIC0.13□□□□□ -2.39
PHGDHO43175 MIR4514-201ENST00000581410 57 ntBASIC0.13□□□□□ -2.39
PHGDHO43175 AC023932.2-201ENST00000603176 175 ntBASIC0.13□□□□□ -2.39
PHGDHO43175 AC062037.1-201ENST00000605302 128 ntBASIC0.13□□□□□ -2.39
PHGDHO43175 Y_RNA.371-201ENST00000365591 113 ntBASIC0.12□□□□□ -2.39
PHGDHO43175 MIR876-201ENST00000401147 81 ntBASIC0.12□□□□□ -2.39
PHGDHO43175 SCARNA17.3-201ENST00000516381 125 ntBASIC0.12□□□□□ -2.39
PHGDHO43175 RNU6-175P-201ENST00000516896 107 ntBASIC0.12□□□□□ -2.39
PHGDHO43175 MIR330-201ENST00000362196 94 ntBASIC0.11□□□□□ -2.39
PHGDHO43175 SNORD114-5-201ENST00000362928 70 ntBASIC0.11□□□□□ -2.39
PHGDHO43175 MIR582-201ENST00000365731 98 ntBASIC0.11□□□□□ -2.39
PHGDHO43175 MIR106A-201ENST00000384870 81 ntBASIC0.11□□□□□ -2.39
PHGDHO43175 SNORD77.2-201ENST00000391045 68 ntBASIC0.11□□□□□ -2.39
PHGDHO43175 RNA5SP299-201ENST00000391203 116 ntBASIC0.11□□□□□ -2.39
PHGDHO43175 SNORD75.2-201ENST00000408784 58 ntBASIC0.11□□□□□ -2.39
PHGDHO43175 MIR145-201ENST00000384967 88 ntBASIC0.1□□□□□ -2.39
PHGDHO43175 MIR892B-201ENST00000401279 77 ntBASIC0.1□□□□□ -2.39
PHGDHO43175 RNU7-24P-201ENST00000458867 62 ntBASIC0.1□□□□□ -2.39
PHGDHO43175 AC006254.2-201ENST00000603259 279 ntBASIC0.1□□□□□ -2.39
PHGDHO43175 RNU6-478P-201ENST00000363904 110 ntBASIC0.09□□□□□ -2.4
PHGDHO43175 Y_RNA.205-201ENST00000364128 113 ntBASIC0.09□□□□□ -2.4
PHGDHO43175 RNU6-990P-201ENST00000364385 104 ntBASIC0.09□□□□□ -2.4
PHGDHO43175 SNORD114-29-201ENST00000364819 70 ntBASIC0.09□□□□□ -2.4
PHGDHO43175 Y_RNA.426-201ENST00000384068 113 ntBASIC0.09□□□□□ -2.4
PHGDHO43175 SNORA75.1-201ENST00000391130 148 ntBASIC0.09□□□□□ -2.4
PHGDHO43175 RNA5SP163-201ENST00000410304 99 ntBASIC0.09□□□□□ -2.4
PHGDHO43175 U6.81-201ENST00000612550 106 ntBASIC0.09□□□□□ -2.4
PHGDHO43175 MIR8087-201ENST00000612745 78 ntBASIC0.09□□□□□ -2.4
PHGDHO43175 DLEU2_3.2-201ENST00000612883 73 ntBASIC0.09□□□□□ -2.4
PHGDHO43175 SNORD114-4-201ENST00000363962 75 ntBASIC0.08□□□□□ -2.4
PHGDHO43175 Y_RNA.660-201ENST00000516002 120 ntBASIC0.08□□□□□ -2.4
PHGDHO43175 MIR20A-201ENST00000362279 71 ntBASIC0.07□□□□□ -2.4
PHGDHO43175 Y_RNA.12-201ENST00000362393 112 ntBASIC0.07□□□□□ -2.4
PHGDHO43175 RNU6-340P-201ENST00000364005 107 ntBASIC0.07□□□□□ -2.4
PHGDHO43175 Y_RNA.606-201ENST00000410579 103 ntBASIC0.07□□□□□ -2.4
PHGDHO43175 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC0.07□□□□□ -2.4
PHGDHO43175 MIR6779-201ENST00000617283 64 ntBASIC0.07□□□□□ -2.4
PHGDHO43175 RNU6-820P-201ENST00000384273 107 ntBASIC0.06□□□□□ -2.4
PHGDHO43175 MIR203A-201ENST00000384836 110 ntBASIC0.06□□□□□ -2.4
PHGDHO43175 RNU6-129P-201ENST00000391022 107 ntBASIC0.06□□□□□ -2.4
PHGDHO43175 Y_RNA.607-201ENST00000410597 98 ntBASIC0.06□□□□□ -2.4
PHGDHO43175 RNU6-592P-201ENST00000411333 103 ntBASIC0.06□□□□□ -2.4
PHGDHO43175 RNU7-171P-201ENST00000459581 62 ntBASIC0.06□□□□□ -2.4
PHGDHO43175 MIR4743-201ENST00000584576 69 ntBASIC0.06□□□□□ -2.4
PHGDHO43175 MIR6514-201ENST00000622549 70 ntBASIC0.06□□□□□ -2.4
PHGDHO43175 MIR7-2-201ENST00000384970 110 ntBASIC0.05□□□□□ -2.4
PHGDHO43175 MIR548E-201ENST00000408287 88 ntBASIC0.05□□□□□ -2.4
PHGDHO43175 AC244090.1-201ENST00000441884 93 ntBASIC0.05□□□□□ -2.4
PHGDHO43175 RNU6-180P-201ENST00000516697 61 ntBASIC0.05□□□□□ -2.4
PHGDHO43175 RNU6-557P-201ENST00000516842 110 ntBASIC0.05□□□□□ -2.4
PHGDHO43175 YWHAEP3-201ENST00000582767 121 ntBASIC0.05□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 200.7 ms