Protein–RNA interactions for Protein: O15347

HMGB3, High mobility group protein B3, humanhuman

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3O15347 AL589823.1-201ENST00000429577 183 ntBASIC-2.64□□□□□ -2.83
HMGB3O15347 AC104996.3-201ENST00000590718 94 ntBASIC-2.64□□□□□ -2.83
HMGB3O15347 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-2.64□□□□□ -2.83
HMGB3O15347 AC018880.2-201ENST00000414265 201 ntBASIC-2.65□□□□□ -2.83
HMGB3O15347 MIR3139-201ENST00000579145 76 ntBASIC-2.65□□□□□ -2.83
HMGB3O15347 Y_RNA.103-201ENST00000363171 102 ntBASIC-2.66□□□□□ -2.84
HMGB3O15347 Y_RNA.163-201ENST00000363702 113 ntBASIC-2.66□□□□□ -2.84
HMGB3O15347 SNORD19-201ENST00000391191 68 ntBASIC-2.66□□□□□ -2.84
HMGB3O15347 AC026407.1-201ENST00000518369 204 ntBASIC-2.66□□□□□ -2.84
HMGB3O15347 AL513043.2-201ENST00000573941 143 ntBASIC-2.66□□□□□ -2.84
HMGB3O15347 MIR3657-201ENST00000584818 117 ntBASIC-2.66□□□□□ -2.84
HMGB3O15347 AC139792.2-201ENST00000624218 587 ntBASIC-2.66□□□□□ -2.84
HMGB3O15347 Y_RNA.491-201ENST00000384417 107 ntBASIC-2.67□□□□□ -2.84
HMGB3O15347 SNORD54-201ENST00000459159 67 ntBASIC-2.67□□□□□ -2.84
HMGB3O15347 RNU6-62P-201ENST00000516526 102 ntBASIC-2.67□□□□□ -2.84
HMGB3O15347 MIR6509-201ENST00000614603 85 ntBASIC-2.67□□□□□ -2.84
HMGB3O15347 Y_RNA.58-201ENST00000362807 102 ntBASIC-2.68□□□□□ -2.84
HMGB3O15347 RNY3P1-201ENST00000365085 102 ntBASIC-2.68□□□□□ -2.84
HMGB3O15347 SNORD42.2-201ENST00000365570 69 ntBASIC-2.68□□□□□ -2.84
HMGB3O15347 MIR521-2-201ENST00000384818 87 ntBASIC-2.68□□□□□ -2.84
HMGB3O15347 RNA5SP136-201ENST00000410906 107 ntBASIC-2.68□□□□□ -2.84
HMGB3O15347 Y_RNA.71-201ENST00000362892 104 ntBASIC-2.69□□□□□ -2.84
HMGB3O15347 RNA5SP405-201ENST00000363059 114 ntBASIC-2.69□□□□□ -2.84
HMGB3O15347 RNU6-774P-201ENST00000363238 107 ntBASIC-2.69□□□□□ -2.84
HMGB3O15347 Y_RNA.344-201ENST00000365381 112 ntBASIC-2.69□□□□□ -2.84
HMGB3O15347 MIR203A-201ENST00000384836 110 ntBASIC-2.69□□□□□ -2.84
HMGB3O15347 MIR3121-201ENST00000579680 77 ntBASIC-2.69□□□□□ -2.84
HMGB3O15347 MIR369-201ENST00000362155 70 ntBASIC-2.7□□□□□ -2.84
HMGB3O15347 Y_RNA.153-201ENST00000363615 91 ntBASIC-2.7□□□□□ -2.84
HMGB3O15347 Y_RNA.352-201ENST00000365439 102 ntBASIC-2.7□□□□□ -2.84
HMGB3O15347 Y_RNA.527-201ENST00000384573 102 ntBASIC-2.7□□□□□ -2.84
HMGB3O15347 RNU6-79P-201ENST00000362511 107 ntBASIC-2.71□□□□□ -2.84
HMGB3O15347 SNORD116-4-201ENST00000384733 96 ntBASIC-2.71□□□□□ -2.84
HMGB3O15347 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-2.71□□□□□ -2.84
HMGB3O15347 MIR548P-201ENST00000408336 84 ntBASIC-2.71□□□□□ -2.84
HMGB3O15347 Y_RNA.158-201ENST00000363651 101 ntBASIC-2.72□□□□□ -2.84
HMGB3O15347 Y_RNA.175-201ENST00000363794 111 ntBASIC-2.72□□□□□ -2.84
HMGB3O15347 Y_RNA.277-201ENST00000364754 102 ntBASIC-2.72□□□□□ -2.84
HMGB3O15347 Y_RNA.340-201ENST00000365330 92 ntBASIC-2.72□□□□□ -2.84
HMGB3O15347 SNORA19.1-201ENST00000410656 129 ntBASIC-2.72□□□□□ -2.84
HMGB3O15347 MIR4773-1-201ENST00000637203 78 ntBASIC-2.72□□□□□ -2.84
HMGB3O15347 SNORD4B-201ENST00000459083 72 ntBASIC-2.73□□□□□ -2.85
HMGB3O15347 RNU6-518P-201ENST00000516056 96 ntBASIC-2.73□□□□□ -2.85
HMGB3O15347 RNU6-988P-201ENST00000519081 107 ntBASIC-2.73□□□□□ -2.85
HMGB3O15347 RNU6-194P-201ENST00000363862 105 ntBASIC-2.74□□□□□ -2.85
HMGB3O15347 Y_RNA.248-201ENST00000364501 109 ntBASIC-2.74□□□□□ -2.85
HMGB3O15347 Y_RNA.529-201ENST00000384586 119 ntBASIC-2.74□□□□□ -2.85
HMGB3O15347 Y_RNA.564-201ENST00000384708 106 ntBASIC-2.74□□□□□ -2.85
HMGB3O15347 MT-TM-201ENST00000387377 68 ntBASIC-2.74□□□□□ -2.85
HMGB3O15347 RNU6-816P-201ENST00000390914 107 ntBASIC-2.74□□□□□ -2.85
HMGB3O15347 SNORD90-201ENST00000391145 111 ntBASIC-2.74□□□□□ -2.85
HMGB3O15347 RNU6-1268P-201ENST00000391214 107 ntBASIC-2.74□□□□□ -2.85
HMGB3O15347 RNU6-1239P-201ENST00000391310 107 ntBASIC-2.74□□□□□ -2.85
HMGB3O15347 MTATP6P29-201ENST00000415057 132 ntBASIC-2.74□□□□□ -2.85
HMGB3O15347 RNU6-238P-201ENST00000363313 106 ntBASIC-2.75□□□□□ -2.85
HMGB3O15347 RNU6-824P-201ENST00000363724 104 ntBASIC-2.75□□□□□ -2.85
HMGB3O15347 Y_RNA.228-201ENST00000364346 98 ntBASIC-2.75□□□□□ -2.85
HMGB3O15347 AL021921.1-201ENST00000442774 93 ntBASIC-2.75□□□□□ -2.85
HMGB3O15347 RNU7-88P-201ENST00000458752 63 ntBASIC-2.75□□□□□ -2.85
HMGB3O15347 U7.5-201ENST00000517224 61 ntBASIC-2.75□□□□□ -2.85
HMGB3O15347 VTRNA2-1-201ENST00000602301 127 ntBASIC-2.75□□□□□ -2.85
HMGB3O15347 Y_RNA.188-201ENST00000363952 111 ntBASIC-2.76□□□□□ -2.85
HMGB3O15347 RNU6-151P-201ENST00000364158 107 ntBASIC-2.76□□□□□ -2.85
HMGB3O15347 SNORD127-201ENST00000458892 86 ntBASIC-2.76□□□□□ -2.85
HMGB3O15347 AC130289.1-201ENST00000577321 73 ntBASIC-2.76□□□□□ -2.85
HMGB3O15347 RNA5SP292-201ENST00000390974 118 ntBASIC-2.77□□□□□ -2.85
HMGB3O15347 SNORD37.2-201ENST00000391075 66 ntBASIC-2.77□□□□□ -2.85
HMGB3O15347 RNU6-644P-201ENST00000391155 98 ntBASIC-2.77□□□□□ -2.85
HMGB3O15347 MIR1263-201ENST00000408324 86 ntBASIC-2.77□□□□□ -2.85
HMGB3O15347 MIR1302-6-201ENST00000408466 90 ntBASIC-2.77□□□□□ -2.85
HMGB3O15347 RNU2-38P-201ENST00000410856 79 ntBASIC-2.77□□□□□ -2.85
HMGB3O15347 AL691482.2-201ENST00000457453 84 ntBASIC-2.77□□□□□ -2.85
HMGB3O15347 MIR548Z-201ENST00000584743 97 ntBASIC-2.77□□□□□ -2.85
HMGB3O15347 MIR6739-201ENST00000622461 75 ntBASIC-2.77□□□□□ -2.85
HMGB3O15347 Y_RNA.435-201ENST00000384095 112 ntBASIC-2.78□□□□□ -2.85
HMGB3O15347 RNU6-246P-201ENST00000384702 107 ntBASIC-2.78□□□□□ -2.85
HMGB3O15347 MIR577-201ENST00000385196 96 ntBASIC-2.78□□□□□ -2.85
HMGB3O15347 Y_RNA.603-201ENST00000410571 108 ntBASIC-2.78□□□□□ -2.85
HMGB3O15347 Y_RNA.626-201ENST00000411288 95 ntBASIC-2.78□□□□□ -2.85
HMGB3O15347 Y_RNA.211-201ENST00000364164 101 ntBASIC-2.79□□□□□ -2.86
HMGB3O15347 RNU7-121P-201ENST00000516604 62 ntBASIC-2.79□□□□□ -2.86
HMGB3O15347 SNORA18.5-201ENST00000516616 101 ntBASIC-2.79□□□□□ -2.86
HMGB3O15347 MIR4439-201ENST00000583746 80 ntBASIC-2.79□□□□□ -2.86
HMGB3O15347 MIR3658-201ENST00000636291 56 ntBASIC-2.79□□□□□ -2.86
HMGB3O15347 RNU6-239P-201ENST00000390990 99 ntBASIC-2.8□□□□□ -2.86
HMGB3O15347 RNU6-1318P-201ENST00000365389 103 ntBASIC-2.81□□□□□ -2.86
HMGB3O15347 RNU6-918P-201ENST00000391219 106 ntBASIC-2.81□□□□□ -2.86
HMGB3O15347 DNAJC19P2-201ENST00000593340 302 ntBASIC-2.81□□□□□ -2.86
HMGB3O15347 Y_RNA.483-201ENST00000384380 101 ntBASIC-2.82□□□□□ -2.86
HMGB3O15347 RNU6-713P-201ENST00000384761 107 ntBASIC-2.82□□□□□ -2.86
HMGB3O15347 MIR548I1-201ENST00000408810 149 ntBASIC-2.82□□□□□ -2.86
HMGB3O15347 RNU6-1174P-201ENST00000517278 101 ntBASIC-2.82□□□□□ -2.86
HMGB3O15347 MIR4694-201ENST00000578534 80 ntBASIC-2.82□□□□□ -2.86
HMGB3O15347 MIR4680-201ENST00000580906 66 ntBASIC-2.82□□□□□ -2.86
HMGB3O15347 U6.104-201ENST00000637979 90 ntBASIC-2.82□□□□□ -2.86
HMGB3O15347 Y_RNA.356-201ENST00000365475 113 ntBASIC-2.83□□□□□ -2.86
HMGB3O15347 RNU6-695P-201ENST00000391157 104 ntBASIC-2.83□□□□□ -2.86
HMGB3O15347 MIR548Q-201ENST00000408404 100 ntBASIC-2.83□□□□□ -2.86
HMGB3O15347 MTND3P2-201ENST00000438452 342 ntBASIC-2.83□□□□□ -2.86
HMGB3O15347 MIR548AG1-201ENST00000579932 66 ntBASIC-2.83□□□□□ -2.86
Retrieved 100 of 98,524 protein–RNA pairs in 167.1 ms