Protein–RNA interactions for Protein: O15232

MATN3, Matrilin-3, humanhuman

Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATN3O15232 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.18□□□□□ -2.22
MATN3O15232 MIR4460-201ENST00000577862 86 ntBASIC1.18□□□□□ -2.22
MATN3O15232 MIR4452-201ENST00000583004 71 ntBASIC1.18□□□□□ -2.22
MATN3O15232 MIR6734-201ENST00000621166 68 ntBASIC1.18□□□□□ -2.22
MATN3O15232 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
MATN3O15232 MIR521-2-201ENST00000384818 87 ntBASIC1.17□□□□□ -2.22
MATN3O15232 RNU4-88P-201ENST00000411220 86 ntBASIC1.17□□□□□ -2.22
MATN3O15232 snoU13.13-201ENST00000458842 104 ntBASIC1.17□□□□□ -2.22
MATN3O15232 AC002350.1-201ENST00000490759 375 ntBASIC1.17□□□□□ -2.22
MATN3O15232 RNA5SP220-201ENST00000516298 104 ntBASIC1.17□□□□□ -2.22
MATN3O15232 MIR4639-201ENST00000584938 69 ntBASIC1.17□□□□□ -2.22
MATN3O15232 MIR6078-201ENST00000611069 100 ntBASIC1.17□□□□□ -2.22
MATN3O15232 AC244669.1-204ENST00000621564 178 ntBASIC1.17□□□□□ -2.22
MATN3O15232 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.17□□□□□ -2.22
MATN3O15232 RNU6-1162P-201ENST00000384443 104 ntBASIC1.16□□□□□ -2.22
MATN3O15232 SNORD28-201ENST00000384706 75 ntBASIC1.16□□□□□ -2.22
MATN3O15232 MIR548C-201ENST00000384815 97 ntBASIC1.16□□□□□ -2.22
MATN3O15232 RNU7-174P-201ENST00000516248 59 ntBASIC1.16□□□□□ -2.22
MATN3O15232 RNU6-135P-201ENST00000516769 101 ntBASIC1.16□□□□□ -2.22
MATN3O15232 U2.7-201ENST00000619197 100 ntBASIC1.16□□□□□ -2.22
MATN3O15232 U4.4-201ENST00000620626 117 ntBASIC1.16□□□□□ -2.22
MATN3O15232 RNU1-141P-201ENST00000364623 158 ntBASIC1.15□□□□□ -2.23
MATN3O15232 RNU6-726P-201ENST00000364680 107 ntBASIC1.15□□□□□ -2.23
MATN3O15232 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.14□□□□□ -2.23
MATN3O15232 RNU6-698P-201ENST00000363523 107 ntBASIC1.14□□□□□ -2.23
MATN3O15232 RNU6-34P-201ENST00000364874 107 ntBASIC1.14□□□□□ -2.23
MATN3O15232 Y_RNA.379-201ENST00000365653 102 ntBASIC1.14□□□□□ -2.23
MATN3O15232 MIR517B-201ENST00000385102 67 ntBASIC1.14□□□□□ -2.23
MATN3O15232 MIR548L-201ENST00000408303 86 ntBASIC1.14□□□□□ -2.23
MATN3O15232 RNU5B-6P-201ENST00000516765 68 ntBASIC1.14□□□□□ -2.23
MATN3O15232 MIR548AD-201ENST00000584780 82 ntBASIC1.14□□□□□ -2.23
MATN3O15232 SNORD18A-201ENST00000363753 72 ntBASIC1.13□□□□□ -2.23
MATN3O15232 SNORD114-4-201ENST00000363962 75 ntBASIC1.13□□□□□ -2.23
MATN3O15232 SNORD113-2-201ENST00000391082 72 ntBASIC1.13□□□□□ -2.23
MATN3O15232 AC021146.9-201ENST00000512503 156 ntBASIC1.13□□□□□ -2.23
MATN3O15232 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
MATN3O15232 SNORD114-22-201ENST00000365423 72 ntBASIC1.12□□□□□ -2.23
MATN3O15232 RNU6-520P-201ENST00000384717 104 ntBASIC1.12□□□□□ -2.23
MATN3O15232 RNU6-269P-201ENST00000391077 97 ntBASIC1.12□□□□□ -2.23
MATN3O15232 Y_RNA.633-201ENST00000459107 95 ntBASIC1.12□□□□□ -2.23
MATN3O15232 RNA5SP47-201ENST00000517230 109 ntBASIC1.12□□□□□ -2.23
MATN3O15232 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.12□□□□□ -2.23
MATN3O15232 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC1.12□□□□□ -2.23
MATN3O15232 SNORA33.1-201ENST00000364957 130 ntBASIC1.11□□□□□ -2.23
MATN3O15232 RNU6-716P-201ENST00000365621 103 ntBASIC1.11□□□□□ -2.23
MATN3O15232 MIR1285-1-201ENST00000408593 84 ntBASIC1.11□□□□□ -2.23
MATN3O15232 RNA5SP484-201ENST00000458857 111 ntBASIC1.11□□□□□ -2.23
MATN3O15232 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.11□□□□□ -2.23
MATN3O15232 RNU6-469P-201ENST00000516253 101 ntBASIC1.11□□□□□ -2.23
MATN3O15232 RNA5SP327-201ENST00000362494 101 ntBASIC1.1□□□□□ -2.23
MATN3O15232 SNORA8.2-201ENST00000384372 139 ntBASIC1.1□□□□□ -2.23
MATN3O15232 SNORD12-201ENST00000391002 90 ntBASIC1.1□□□□□ -2.23
MATN3O15232 SNORA70.22-201ENST00000517160 124 ntBASIC1.1□□□□□ -2.23
MATN3O15232 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
MATN3O15232 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.09□□□□□ -2.23
MATN3O15232 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.09□□□□□ -2.23
MATN3O15232 Y_RNA.125-201ENST00000363371 111 ntBASIC1.09□□□□□ -2.23
MATN3O15232 RNU6-753P-201ENST00000363926 107 ntBASIC1.09□□□□□ -2.23
MATN3O15232 SNORA15B-2-201ENST00000384058 135 ntBASIC1.09□□□□□ -2.23
MATN3O15232 SNORA15B-1-201ENST00000384334 135 ntBASIC1.09□□□□□ -2.23
MATN3O15232 AC002429.1-201ENST00000437672 148 ntBASIC1.09□□□□□ -2.23
MATN3O15232 MIR4295-201ENST00000585286 85 ntBASIC1.09□□□□□ -2.23
MATN3O15232 uc_338.10-201ENST00000621872 182 ntBASIC1.09□□□□□ -2.23
MATN3O15232 MIR96-201ENST00000362288 78 ntBASIC1.08□□□□□ -2.24
MATN3O15232 SNORA41B-201ENST00000384785 128 ntBASIC1.08□□□□□ -2.24
MATN3O15232 AC087343.1-201ENST00000477341 475 ntBASIC1.08□□□□□ -2.24
MATN3O15232 RNA5SP480-201ENST00000516840 109 ntBASIC1.08□□□□□ -2.24
MATN3O15232 SNORA63.6-201ENST00000364921 119 ntBASIC1.07□□□□□ -2.24
MATN3O15232 MIR582-201ENST00000365731 98 ntBASIC1.07□□□□□ -2.24
MATN3O15232 SNORD105-201ENST00000386910 85 ntBASIC1.07□□□□□ -2.24
MATN3O15232 SNORD89-201ENST00000390981 114 ntBASIC1.07□□□□□ -2.24
MATN3O15232 RNU6-980P-201ENST00000516925 103 ntBASIC1.07□□□□□ -2.24
MATN3O15232 SCARNA16.5-201ENST00000517114 183 ntBASIC1.07□□□□□ -2.24
MATN3O15232 MIR3678-201ENST00000578455 94 ntBASIC1.07□□□□□ -2.24
MATN3O15232 SNORD114-21-201ENST00000606412 72 ntBASIC1.07□□□□□ -2.24
MATN3O15232 RNU1-93P-201ENST00000364704 169 ntBASIC1.06□□□□□ -2.24
MATN3O15232 MIR222-201ENST00000384992 110 ntBASIC1.06□□□□□ -2.24
MATN3O15232 RNU6-1246P-201ENST00000391064 107 ntBASIC1.06□□□□□ -2.24
MATN3O15232 U7.7-201ENST00000459276 60 ntBASIC1.06□□□□□ -2.24
MATN3O15232 OR2A41P-201ENST00000473586 105 ntBASIC1.06□□□□□ -2.24
MATN3O15232 SCARNA17.3-201ENST00000516381 125 ntBASIC1.06□□□□□ -2.24
MATN3O15232 RNU6-1110P-201ENST00000516462 101 ntBASIC1.06□□□□□ -2.24
MATN3O15232 RNU6-231P-201ENST00000517122 103 ntBASIC1.06□□□□□ -2.24
MATN3O15232 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.06□□□□□ -2.24
MATN3O15232 AL162376.1-201ENST00000624117 175 ntBASIC1.06□□□□□ -2.24
MATN3O15232 Y_RNA.246-201ENST00000364495 108 ntBASIC1.05□□□□□ -2.24
MATN3O15232 Y_RNA.325-201ENST00000365171 122 ntBASIC1.05□□□□□ -2.24
MATN3O15232 MIR652-201ENST00000385278 98 ntBASIC1.05□□□□□ -2.24
MATN3O15232 MIR548E-201ENST00000408287 88 ntBASIC1.05□□□□□ -2.24
MATN3O15232 RNU7-119P-201ENST00000459279 63 ntBASIC1.05□□□□□ -2.24
MATN3O15232 Y_RNA.407-201ENST00000383986 113 ntBASIC1.04□□□□□ -2.24
MATN3O15232 RNU6-35P-201ENST00000384530 107 ntBASIC1.04□□□□□ -2.24
MATN3O15232 MIR573-201ENST00000384964 99 ntBASIC1.04□□□□□ -2.24
MATN3O15232 MIR548AE1-201ENST00000583292 70 ntBASIC1.04□□□□□ -2.24
MATN3O15232 DLEU2_4.2-201ENST00000616613 58 ntBASIC1.04□□□□□ -2.24
MATN3O15232 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
MATN3O15232 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
MATN3O15232 SNORA9.1-201ENST00000362412 131 ntBASIC1.03□□□□□ -2.24
MATN3O15232 SNORA25-201ENST00000384384 134 ntBASIC1.03□□□□□ -2.24
MATN3O15232 Y_RNA.540-201ENST00000384638 111 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms