Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 SNORA26.2-201ENST00000390922 122 ntBASIC0.28□□□□□ -2.36
CLIC1O00299 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC0.28□□□□□ -2.36
CLIC1O00299 RNA5SP134-201ENST00000516492 96 ntBASIC0.28□□□□□ -2.36
CLIC1O00299 RNU6-557P-201ENST00000516842 110 ntBASIC0.28□□□□□ -2.36
CLIC1O00299 Y_RNA.264-201ENST00000364665 102 ntBASIC0.27□□□□□ -2.37
CLIC1O00299 RNU6-127P-201ENST00000390897 107 ntBASIC0.27□□□□□ -2.37
CLIC1O00299 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.27□□□□□ -2.37
CLIC1O00299 MIR1302-4-201ENST00000408701 150 ntBASIC0.27□□□□□ -2.37
CLIC1O00299 RNU6-592P-201ENST00000411333 103 ntBASIC0.27□□□□□ -2.37
CLIC1O00299 RNU7-24P-201ENST00000458867 62 ntBASIC0.27□□□□□ -2.37
CLIC1O00299 RNU6-1108P-201ENST00000516308 104 ntBASIC0.27□□□□□ -2.37
CLIC1O00299 MIR4315-1-201ENST00000636800 73 ntBASIC0.27□□□□□ -2.37
CLIC1O00299 MIR4315-2-201ENST00000640925 73 ntBASIC0.27□□□□□ -2.37
CLIC1O00299 RNU6-478P-201ENST00000363904 110 ntBASIC0.26□□□□□ -2.37
CLIC1O00299 RNU6-382P-201ENST00000365181 106 ntBASIC0.26□□□□□ -2.37
CLIC1O00299 MIR652-201ENST00000385278 98 ntBASIC0.26□□□□□ -2.37
CLIC1O00299 RNU6-129P-201ENST00000391022 107 ntBASIC0.26□□□□□ -2.37
CLIC1O00299 SNORD75.2-201ENST00000408784 58 ntBASIC0.26□□□□□ -2.37
CLIC1O00299 Y_RNA.606-201ENST00000410579 103 ntBASIC0.26□□□□□ -2.37
CLIC1O00299 Y_RNA.660-201ENST00000516002 120 ntBASIC0.26□□□□□ -2.37
CLIC1O00299 Y_RNA.676-201ENST00000516393 96 ntBASIC0.26□□□□□ -2.37
CLIC1O00299 MIR3925-201ENST00000584674 77 ntBASIC0.26□□□□□ -2.37
CLIC1O00299 AC243829.6-201ENST00000612652 106 ntBASIC0.26□□□□□ -2.37
CLIC1O00299 MIR516B1-201ENST00000385211 90 ntBASIC0.25□□□□□ -2.37
CLIC1O00299 RNU6-782P-201ENST00000516852 104 ntBASIC0.25□□□□□ -2.37
CLIC1O00299 U6.81-201ENST00000612550 106 ntBASIC0.25□□□□□ -2.37
CLIC1O00299 Y_RNA.316-201ENST00000365118 111 ntBASIC0.24□□□□□ -2.37
CLIC1O00299 RNU6-652P-201ENST00000365488 107 ntBASIC0.24□□□□□ -2.37
CLIC1O00299 RNU6-154P-201ENST00000384306 106 ntBASIC0.24□□□□□ -2.37
CLIC1O00299 MIR4666B-201ENST00000578142 81 ntBASIC0.24□□□□□ -2.37
CLIC1O00299 Y_RNA.12-201ENST00000362393 112 ntBASIC0.23□□□□□ -2.37
CLIC1O00299 SNORD114-4-201ENST00000363962 75 ntBASIC0.23□□□□□ -2.37
CLIC1O00299 RNU6-686P-201ENST00000364839 107 ntBASIC0.23□□□□□ -2.37
CLIC1O00299 Y_RNA.371-201ENST00000365591 113 ntBASIC0.23□□□□□ -2.37
CLIC1O00299 RNU6-787P-201ENST00000384032 107 ntBASIC0.23□□□□□ -2.37
CLIC1O00299 SCARNA17.3-201ENST00000516381 125 ntBASIC0.23□□□□□ -2.37
CLIC1O00299 MIR4711-201ENST00000578274 70 ntBASIC0.23□□□□□ -2.37
CLIC1O00299 YWHAEP3-201ENST00000582767 121 ntBASIC0.23□□□□□ -2.37
CLIC1O00299 AC084368.1-201ENST00000620935 65 ntBASIC0.23□□□□□ -2.37
CLIC1O00299 MIR4773-1-201ENST00000637203 78 ntBASIC0.23□□□□□ -2.37
CLIC1O00299 MIRLET7A1-201ENST00000362295 80 ntBASIC0.22□□□□□ -2.37
CLIC1O00299 RNU6-340P-201ENST00000364005 107 ntBASIC0.22□□□□□ -2.37
CLIC1O00299 RNA5SP173-201ENST00000364857 136 ntBASIC0.22□□□□□ -2.37
CLIC1O00299 RNU6-573P-201ENST00000383938 106 ntBASIC0.22□□□□□ -2.37
CLIC1O00299 MIR936-201ENST00000401264 98 ntBASIC0.22□□□□□ -2.37
CLIC1O00299 VTRNA1-3-201ENST00000365645 89 ntBASIC0.21□□□□□ -2.38
CLIC1O00299 MIR1287-201ENST00000408492 90 ntBASIC0.21□□□□□ -2.38
CLIC1O00299 MIR5093-201ENST00000583199 100 ntBASIC0.21□□□□□ -2.38
CLIC1O00299 Y_RNA.226-201ENST00000364337 114 ntBASIC0.2□□□□□ -2.38
CLIC1O00299 MIR643-201ENST00000385267 97 ntBASIC0.2□□□□□ -2.38
CLIC1O00299 MIR876-201ENST00000401147 81 ntBASIC0.2□□□□□ -2.38
CLIC1O00299 SCARNA11.2-201ENST00000517183 154 ntBASIC0.2□□□□□ -2.38
CLIC1O00299 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.2□□□□□ -2.38
CLIC1O00299 RNU6-681P-201ENST00000364012 104 ntBASIC0.19□□□□□ -2.38
CLIC1O00299 MIR548H2-201ENST00000408874 88 ntBASIC0.19□□□□□ -2.38
CLIC1O00299 RNA5SP193-201ENST00000410353 107 ntBASIC0.19□□□□□ -2.38
CLIC1O00299 RNU7-188P-201ENST00000517063 64 ntBASIC0.19□□□□□ -2.38
CLIC1O00299 DLEU2_3.2-201ENST00000612883 73 ntBASIC0.19□□□□□ -2.38
CLIC1O00299 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.18□□□□□ -2.38
CLIC1O00299 MIR20A-201ENST00000362279 71 ntBASIC0.18□□□□□ -2.38
CLIC1O00299 RNU6-315P-201ENST00000362666 107 ntBASIC0.18□□□□□ -2.38
CLIC1O00299 SNORD114-29-201ENST00000364819 70 ntBASIC0.18□□□□□ -2.38
CLIC1O00299 Y_RNA.313-201ENST00000365095 103 ntBASIC0.18□□□□□ -2.38
CLIC1O00299 RNU6-1039P-201ENST00000383931 107 ntBASIC0.18□□□□□ -2.38
CLIC1O00299 RNU6-274P-201ENST00000459566 107 ntBASIC0.18□□□□□ -2.38
CLIC1O00299 MIR1245B-201ENST00000636115 69 ntBASIC0.18□□□□□ -2.38
CLIC1O00299 SNORA42.1-201ENST00000363515 137 ntBASIC0.17□□□□□ -2.38
CLIC1O00299 SNORA75.1-201ENST00000391130 148 ntBASIC0.17□□□□□ -2.38
CLIC1O00299 AC244090.1-201ENST00000441884 93 ntBASIC0.17□□□□□ -2.38
CLIC1O00299 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC0.17□□□□□ -2.38
CLIC1O00299 RN7SL660P-201ENST00000614852 299 ntBASIC0.17□□□□□ -2.38
CLIC1O00299 AC022709.1-201ENST00000615967 87 ntBASIC0.17□□□□□ -2.38
CLIC1O00299 RNA5SP214-201ENST00000363378 118 ntBASIC0.16□□□□□ -2.38
CLIC1O00299 AL691482.2-201ENST00000457453 84 ntBASIC0.16□□□□□ -2.38
CLIC1O00299 RNA5SP436-201ENST00000516020 115 ntBASIC0.16□□□□□ -2.38
CLIC1O00299 SNORA62.5-201ENST00000516634 120 ntBASIC0.16□□□□□ -2.38
CLIC1O00299 RNU6-175P-201ENST00000516896 107 ntBASIC0.16□□□□□ -2.38
CLIC1O00299 RNU6-303P-201ENST00000517091 106 ntBASIC0.16□□□□□ -2.38
CLIC1O00299 AC104408.1-201ENST00000605241 170 ntBASIC0.16□□□□□ -2.38
CLIC1O00299 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.16□□□□□ -2.38
CLIC1O00299 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.16□□□□□ -2.38
CLIC1O00299 Y_RNA.94-201ENST00000363068 106 ntBASIC0.15□□□□□ -2.39
CLIC1O00299 SNORD114-23-201ENST00000363536 72 ntBASIC0.15□□□□□ -2.39
CLIC1O00299 RNA5SP325-201ENST00000363756 130 ntBASIC0.15□□□□□ -2.39
CLIC1O00299 SNORD114-9-201ENST00000364370 72 ntBASIC0.15□□□□□ -2.39
CLIC1O00299 RNU6-260P-201ENST00000384092 107 ntBASIC0.15□□□□□ -2.39
CLIC1O00299 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.15□□□□□ -2.39
CLIC1O00299 MIR6515-201ENST00000619843 57 ntBASIC0.15□□□□□ -2.39
CLIC1O00299 Y_RNA.219-201ENST00000364232 113 ntBASIC0.14□□□□□ -2.39
CLIC1O00299 RNU6-990P-201ENST00000364385 104 ntBASIC0.14□□□□□ -2.39
CLIC1O00299 MIR582-201ENST00000365731 98 ntBASIC0.14□□□□□ -2.39
CLIC1O00299 Y_RNA.532-201ENST00000384590 113 ntBASIC0.14□□□□□ -2.39
CLIC1O00299 MIR610-201ENST00000385139 96 ntBASIC0.14□□□□□ -2.39
CLIC1O00299 RNA5SP299-201ENST00000391203 116 ntBASIC0.14□□□□□ -2.39
CLIC1O00299 MIR548E-201ENST00000408287 88 ntBASIC0.14□□□□□ -2.39
CLIC1O00299 AC074348.1-201ENST00000426503 132 ntBASIC0.14□□□□□ -2.39
CLIC1O00299 snoU13.18-201ENST00000459483 104 ntBASIC0.14□□□□□ -2.39
CLIC1O00299 RNU6-752P-201ENST00000516376 102 ntBASIC0.14□□□□□ -2.39
CLIC1O00299 MIR4712-201ENST00000583750 82 ntBASIC0.14□□□□□ -2.39
CLIC1O00299 MIR4743-201ENST00000584576 69 ntBASIC0.14□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 218.6 ms